RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 PLCH2O75038 1416 aa33.07■■■□□ 2.88
SNX5-201ENST00000377759 PLA2R1Q13018 1463 aa33.06■■■□□ 2.88
SNX5-201ENST00000377759 FAM9BQ8IZU0 186 aa33.04■■■□□ 2.88
SNX5-201ENST00000377759 CCDC144AA2RUR9 1427 aa33.01■■■□□ 2.87
SNX5-201ENST00000377759 POLR3GLQ9BT43 218 aa33■■■□□ 2.87
SNX5-201ENST00000377759 IQGAP3Q86VI3 1631 aa32.99■■■□□ 2.87
SNX5-201ENST00000377759 DUOX2Q9NRD8 1548 aa32.99■■■□□ 2.87
SNX5-201ENST00000377759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.99■■■□□ 2.879e-9■□□□□ 11.1
SNX5-201ENST00000377759 ST20-MTHFSA0A0A6YYL1 179 aa32.98■■■□□ 2.87
SNX5-201ENST00000377759 EFCAB2Q5VUJ9 269 aa32.97■■■□□ 2.87
SNX5-201ENST00000377759 ROCK2O75116 1388 aaKnown RBP32.96■■■□□ 2.87
SNX5-201ENST00000377759 PRAG1Q86YV5 1406 aa32.96■■■□□ 2.87
SNX5-201ENST00000377759 MAGI2Q86UL8 1455 aa32.95■■■□□ 2.87
SNX5-201ENST00000377759 ABCC1P33527 1531 aa32.94■■■□□ 2.86
SNX5-201ENST00000377759 ERBINQ96RT1 1412 aa32.94■■■□□ 2.86
SNX5-201ENST00000377759 ZBED9Q6R2W3 1325 aa32.93■■■□□ 2.86
SNX5-201ENST00000377759 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
SNX5-201ENST00000377759 TRPM1Q7Z4N2 1603 aa32.91■■■□□ 2.86
SNX5-201ENST00000377759 A2MP01023 1474 aa32.89■■■□□ 2.86
SNX5-201ENST00000377759 RGL3Q3MIN7 710 aa32.88■■■□□ 2.85
SNX5-201ENST00000377759 ATP10AO60312 1499 aa32.88■■■□□ 2.85
SNX5-201ENST00000377759 CNGB1Q14028 1251 aaPredicted RBP32.84■■■□□ 2.85
SNX5-201ENST00000377759 GPRASP1Q5JY77 1395 aa32.83■■■□□ 2.85
SNX5-201ENST00000377759 NBPF1Q3BBV0 1214 aa32.83■■■□□ 2.85
SNX5-201ENST00000377759 ARAP3Q8WWN8 1544 aa32.8■■■□□ 2.84
SNX5-201ENST00000377759 IRX6P78412 446 aaPredicted RBP32.79■■■□□ 2.84
SNX5-201ENST00000377759 E9PCH4 1651 aa32.78■■■□□ 2.84
SNX5-201ENST00000377759 AFAP1Q8N556 730 aa32.76■■■□□ 2.83
SNX5-201ENST00000377759 RTEL1-TNFRSF6BF6WH68 1400 aa32.75■■■□□ 2.83
SNX5-201ENST00000377759 SPAG9O60271 1321 aaKnown RBP32.75■■■□□ 2.83
SNX5-201ENST00000377759 LAMC1P11047 1609 aa32.73■■■□□ 2.83
SNX5-201ENST00000377759 ZFYVE16Q7Z3T8 1539 aa32.72■■■□□ 2.83
SNX5-201ENST00000377759 PNISRQ8TF01 805 aaKnown RBP32.72■■■□□ 2.83
SNX5-201ENST00000377759 PRDM15P57071 1507 aaPredicted RBP32.72■■■□□ 2.83
SNX5-201ENST00000377759 WDR7Q9Y4E6 1490 aa32.71■■■□□ 2.83
SNX5-201ENST00000377759 ERICH6BQ5W0A0 696 aa32.68■■■□□ 2.82
SNX5-201ENST00000377759 TESK2Q96S53 571 aa32.67■■■□□ 2.82
SNX5-201ENST00000377759 EIF2AK4Q9P2K8 1649 aaKnown RBP32.67■■■□□ 2.82
SNX5-201ENST00000377759 KTN1Q86UP2 1357 aaKnown RBP32.67■■■□□ 2.82
SNX5-201ENST00000377759 RALBP1Q15311 655 aa32.65■■■□□ 2.82
SNX5-201ENST00000377759 TMC1Q8TDI8 760 aa32.64■■■□□ 2.82
SNX5-201ENST00000377759 ABCA9Q8IUA7 1624 aa32.64■■■□□ 2.82
SNX5-201ENST00000377759 COL17A1Q9UMD9 1497 aaPredicted RBP32.63■■■□□ 2.81
SNX5-201ENST00000377759 MYBBP1AQ9BQG0 1328 aaKnown RBP32.63■■■□□ 2.81
SNX5-201ENST00000377759 SMG6Q86US8 1419 aaKnown RBP32.62■■■□□ 2.81
SNX5-201ENST00000377759 FANCAO15360 1455 aa32.62■■■□□ 2.81
SNX5-201ENST00000377759 BRD4O60885 1362 aaPredicted RBP32.62■■■□□ 2.81
SNX5-201ENST00000377759 DEPDC5O75140 1603 aa32.6■■■□□ 2.81
SNX5-201ENST00000377759 LRPPRCP42704 1394 aaKnown RBP32.6■■■□□ 2.81
SNX5-201ENST00000377759 DISP3Q9P2K9 1392 aa32.6■■■□□ 2.81
SNX5-201ENST00000377759 PER1O15534 1290 aaPredicted RBP32.6■■■□□ 2.81
SNX5-201ENST00000377759 INO80Q9ULG1 1556 aaPredicted RBP32.58■■■□□ 2.81
SNX5-201ENST00000377759 PTPRTO14522 1441 aa32.58■■■□□ 2.81
SNX5-201ENST00000377759 TRPM2O94759 1503 aa32.57■■■□□ 2.81
SNX5-201ENST00000377759 RNF17Q9BXT8 1623 aaKnown RBP32.57■■■□□ 2.8
SNX5-201ENST00000377759 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
SNX5-201ENST00000377759 PPP4R2Q9NY27 417 aa32.56■■■□□ 2.8
SNX5-201ENST00000377759 PARD3Q8TEW0 1356 aa32.55■■■□□ 2.8
SNX5-201ENST00000377759 NUDCQ9Y266 331 aa32.52■■■□□ 2.8
SNX5-201ENST00000377759 VWDEQ8N2E2 1590 aa32.52■■■□□ 2.8
SNX5-201ENST00000377759 MADDQ8WXG6 1647 aa32.51■■■□□ 2.79
SNX5-201ENST00000377759 RBM19Q9Y4C8 960 aaKnown RBP32.51■■■□□ 2.79
SNX5-201ENST00000377759 SPHKAPQ2M3C7 1700 aa32.51■■■□□ 2.79
SNX5-201ENST00000377759 ASXL2Q76L83 1435 aa32.5■■■□□ 2.79
SNX5-201ENST00000377759 SCAPERQ9BY12 1400 aa32.5■■■□□ 2.79
SNX5-201ENST00000377759 ADGRL1O94910 1474 aa32.5■■■□□ 2.79
SNX5-201ENST00000377759 TET3O43151 1660 aa32.5■■■□□ 2.79
SNX5-201ENST00000377759 CLTCL1P53675 1640 aa32.49■■■□□ 2.79
SNX5-201ENST00000377759 CEP152O94986 1710 aa32.48■■■□□ 2.79
SNX5-201ENST00000377759 SENP3-EIF4A1A0A087X0R7 540 aa32.47■■■□□ 2.79
SNX5-201ENST00000377759 TMF1P82094 1093 aa32.46■■■□□ 2.79
SNX5-201ENST00000377759 NLRP13Q86W25 1043 aa32.46■■■□□ 2.79
SNX5-201ENST00000377759 RNF123Q5XPI4 1314 aa32.45■■■□□ 2.79
SNX5-201ENST00000377759 WASHC2CQ9Y4E1 1318 aa32.44■■■□□ 2.78
SNX5-201ENST00000377759 KIF3BO15066 747 aa32.44■■■□□ 2.78
SNX5-201ENST00000377759 PANK3Q9H999 370 aa32.43■■■□□ 2.78
SNX5-201ENST00000377759 KANK1Q14678 1352 aa32.42■■■□□ 2.78
SNX5-201ENST00000377759 MROH1Q8NDA8 1641 aa32.42■■■□□ 2.78
SNX5-201ENST00000377759 IQGAP1P46940 1657 aa32.4■■■□□ 2.78
SNX5-201ENST00000377759 STAC3Q96MF2 364 aa32.4■■■□□ 2.78
SNX5-201ENST00000377759 MYT1LQ9UL68 1186 aa32.36■■■□□ 2.77
SNX5-201ENST00000377759 B4GALNT3Q6L9W6 998 aa32.35■■■□□ 2.77
SNX5-201ENST00000377759 CC2D1BQ5T0F9 858 aaKnown RBP32.35■■■□□ 2.77
SNX5-201ENST00000377759 KIDINS220Q9ULH0 1771 aa32.34■■■□□ 2.77
SNX5-201ENST00000377759 SCAF11Q99590 1463 aaKnown RBP32.32■■■□□ 2.76
SNX5-201ENST00000377759 NEURL4Q96JN8 1562 aa32.32■■■□□ 2.76
SNX5-201ENST00000377759 UGGT1Q9NYU2 1555 aa32.28■■■□□ 2.76
SNX5-201ENST00000377759 ZNF518AQ6AHZ1 1483 aa32.26■■■□□ 2.75
SNX5-201ENST00000377759 MYT1Q01538 1121 aa32.26■■■□□ 2.75
SNX5-201ENST00000377759 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.75
SNX5-201ENST00000377759 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
SNX5-201ENST00000377759 KIAA1210Q9ULL0 1709 aa32.24■■■□□ 2.75
SNX5-201ENST00000377759 INSRP06213 1382 aa32.22■■■□□ 2.75
SNX5-201ENST00000377759 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
SNX5-201ENST00000377759 LMTK2Q8IWU2 1503 aa32.21■■■□□ 2.75
SNX5-201ENST00000377759 NPM1P06748 294 aaKnown RBP eCLIP32.21■■■□□ 2.756e-41■□□□□ 10.1
SNX5-201ENST00000377759 MYOM2P54296 1465 aa32.2■■■□□ 2.74
SNX5-201ENST00000377759 ZMYM4Q5VZL5 1548 aa32.19■■■□□ 2.74
SNX5-201ENST00000377759 MAP3K4Q9Y6R4 1608 aa32.18■■■□□ 2.74
SNX5-201ENST00000377759 BLMP54132 1417 aaPredicted RBP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms