RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 MLH3Q9UHC1 1453 aa20.76■□□□□ 0.91
UBA1-202ENST00000377269 DUOX2Q9NRD8 1548 aa20.75■□□□□ 0.91
UBA1-202ENST00000377269 NUP155O75694 1391 aa20.75■□□□□ 0.91
UBA1-202ENST00000377269 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
UBA1-202ENST00000377269 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
UBA1-202ENST00000377269 RICTORQ6R327 1708 aa20.74■□□□□ 0.91
UBA1-202ENST00000377269 YEATS2Q9ULM3 1422 aa20.73■□□□□ 0.91
UBA1-202ENST00000377269 SIN3AQ96ST3 1273 aa20.72■□□□□ 0.91
UBA1-202ENST00000377269 DHX29Q7Z478 1369 aaKnown RBP20.72■□□□□ 0.91
UBA1-202ENST00000377269 HECW2Q9P2P5 1572 aa20.71■□□□□ 0.91
UBA1-202ENST00000377269 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
UBA1-202ENST00000377269 KIF3BO15066 747 aa20.71■□□□□ 0.91
UBA1-202ENST00000377269 PZPP20742 1482 aa20.71■□□□□ 0.91
UBA1-202ENST00000377269 A2MP01023 1474 aa20.68■□□□□ 0.9
UBA1-202ENST00000377269 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
UBA1-202ENST00000377269 PKD2Q13563 968 aa20.66■□□□□ 0.9
UBA1-202ENST00000377269 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
UBA1-202ENST00000377269 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
UBA1-202ENST00000377269 RBM19Q9Y4C8 960 aaKnown RBP20.62■□□□□ 0.89
UBA1-202ENST00000377269 GGT6Q6P531 493 aa20.61■□□□□ 0.89
UBA1-202ENST00000377269 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
UBA1-202ENST00000377269 UNC13BO14795 1591 aa20.59■□□□□ 0.89
UBA1-202ENST00000377269 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
UBA1-202ENST00000377269 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
UBA1-202ENST00000377269 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
UBA1-202ENST00000377269 ATP10AO60312 1499 aa20.56■□□□□ 0.88
UBA1-202ENST00000377269 MROH1Q8NDA8 1641 aa20.53■□□□□ 0.88
UBA1-202ENST00000377269 FKBP8Q14318 412 aa20.53■□□□□ 0.88
UBA1-202ENST00000377269 BCANQ96GW7 911 aa20.53■□□□□ 0.88
UBA1-202ENST00000377269 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
UBA1-202ENST00000377269 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
UBA1-202ENST00000377269 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.87
UBA1-202ENST00000377269 KANK1Q14678 1352 aa20.51■□□□□ 0.87
UBA1-202ENST00000377269 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
UBA1-202ENST00000377269 MLECQ14165 292 aa20.49■□□□□ 0.87
UBA1-202ENST00000377269 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
UBA1-202ENST00000377269 ARHGEF40Q8TER5 1519 aa20.48■□□□□ 0.87
UBA1-202ENST00000377269 SIGLEC1Q9BZZ2 1709 aa20.48■□□□□ 0.87
UBA1-202ENST00000377269 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
UBA1-202ENST00000377269 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
UBA1-202ENST00000377269 RNF17Q9BXT8 1623 aaKnown RBP20.46■□□□□ 0.87
UBA1-202ENST00000377269 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
UBA1-202ENST00000377269 MSH5O43196 834 aa20.44■□□□□ 0.86
UBA1-202ENST00000377269 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
UBA1-202ENST00000377269 RPRD2Q5VT52 1461 aaKnown RBP20.42■□□□□ 0.86
UBA1-202ENST00000377269 BCORL1Q5H9F3 1711 aa20.42■□□□□ 0.86
UBA1-202ENST00000377269 PRKCSHP14314 528 aaPredicted RBP20.42■□□□□ 0.86
UBA1-202ENST00000377269 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
UBA1-202ENST00000377269 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
UBA1-202ENST00000377269 E9PCH4 1651 aa20.4■□□□□ 0.86
UBA1-202ENST00000377269 ABCC3O15438 1527 aa20.4■□□□□ 0.86
UBA1-202ENST00000377269 AGLP35573 1532 aa20.4■□□□□ 0.86
UBA1-202ENST00000377269 CEP152O94986 1710 aa20.39■□□□□ 0.85
UBA1-202ENST00000377269 NEFLP07196 543 aa20.38■□□□□ 0.85
UBA1-202ENST00000377269 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
UBA1-202ENST00000377269 TET3O43151 1660 aa20.38■□□□□ 0.85
UBA1-202ENST00000377269 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
UBA1-202ENST00000377269 NPATQ14207 1427 aa20.37■□□□□ 0.85
UBA1-202ENST00000377269 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
UBA1-202ENST00000377269 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
UBA1-202ENST00000377269 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
UBA1-202ENST00000377269 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
UBA1-202ENST00000377269 EFCAB6Q5THR3 1501 aa20.36■□□□□ 0.85
UBA1-202ENST00000377269 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
UBA1-202ENST00000377269 PTPRTO14522 1441 aa20.34■□□□□ 0.85
UBA1-202ENST00000377269 FBXO31Q5XUX0 539 aaPredicted RBP20.32■□□□□ 0.84
UBA1-202ENST00000377269 UGGT1Q9NYU2 1555 aa20.31■□□□□ 0.84
UBA1-202ENST00000377269 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
UBA1-202ENST00000377269 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
UBA1-202ENST00000377269 CAMSAP1Q5T5Y3 1602 aa20.29■□□□□ 0.84
UBA1-202ENST00000377269 TRPM2O94759 1503 aa20.28■□□□□ 0.84
UBA1-202ENST00000377269 ESF1Q9H501 851 aaKnown RBP20.27■□□□□ 0.84
UBA1-202ENST00000377269 KDM2AQ9Y2K7 1162 aa20.27■□□□□ 0.84
UBA1-202ENST00000377269 NBPF8Q3BBV2 869 aa20.26■□□□□ 0.83
UBA1-202ENST00000377269 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
UBA1-202ENST00000377269 SPHKAPQ2M3C7 1700 aa20.26■□□□□ 0.83
UBA1-202ENST00000377269 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
UBA1-202ENST00000377269 ZNF326Q5BKZ1 582 aaKnown RBP20.25■□□□□ 0.83
UBA1-202ENST00000377269 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
UBA1-202ENST00000377269 CLTCQ00610 1675 aaKnown RBP20.24■□□□□ 0.83
UBA1-202ENST00000377269 NOS1P29475 1434 aa20.23■□□□□ 0.83
UBA1-202ENST00000377269 ZC3H13Q5T200 1668 aaKnown RBP20.23■□□□□ 0.83
UBA1-202ENST00000377269 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
UBA1-202ENST00000377269 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
UBA1-202ENST00000377269 SPATA31E1Q6ZUB1 1445 aa20.22■□□□□ 0.83
UBA1-202ENST00000377269 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
UBA1-202ENST00000377269 CEBPAP49715 358 aaPredicted RBP20.21■□□□□ 0.83
UBA1-202ENST00000377269 IDI1Q13907 227 aa20.21■□□□□ 0.83
UBA1-202ENST00000377269 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
UBA1-202ENST00000377269 CNTLNQ9NXG0 1405 aa20.21■□□□□ 0.83
UBA1-202ENST00000377269 SYNMO15061 1565 aa20.19■□□□□ 0.82
UBA1-202ENST00000377269 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
UBA1-202ENST00000377269 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
UBA1-202ENST00000377269 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
UBA1-202ENST00000377269 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
UBA1-202ENST00000377269 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
UBA1-202ENST00000377269 PREX1Q8TCU6 1659 aa20.14■□□□□ 0.81
UBA1-202ENST00000377269 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
UBA1-202ENST00000377269 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
UBA1-202ENST00000377269 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms