RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ANKRD30AQ9BXX3 1397 aa33.95■■■■□ 3.02
SRM-201ENST00000376957 NPATQ14207 1427 aa33.94■■■■□ 3.02
SRM-201ENST00000376957 RRP7BPQ9NSQ0 103 aa33.93■■■■□ 3.02
SRM-201ENST00000376957 KIF15Q9NS87 1388 aa33.93■■■■□ 3.02
SRM-201ENST00000376957 EIF2AK4Q9P2K8 1649 aaKnown RBP33.93■■■■□ 3.02
SRM-201ENST00000376957 HSPA2P54652 639 aa33.9■■■■□ 3.02
SRM-201ENST00000376957 KDM5DQ9BY66 1539 aa33.89■■■■□ 3.02
SRM-201ENST00000376957 CHIC2Q9UKJ5 165 aa33.89■■■■□ 3.02
SRM-201ENST00000376957 PPARGC1BQ86YN6 1023 aaKnown RBP33.87■■■■□ 3.01
SRM-201ENST00000376957 ERBINQ96RT1 1412 aa33.87■■■■□ 3.01
SRM-201ENST00000376957 RNF17Q9BXT8 1623 aaKnown RBP33.83■■■■□ 3.01
SRM-201ENST00000376957 PTPRKQ15262 1439 aa33.79■■■■□ 3
SRM-201ENST00000376957 NCOA1Q15788 1441 aa33.79■■■■□ 3
SRM-201ENST00000376957 ZC3H13Q5T200 1668 aaKnown RBP33.77■■■■□ 3
SRM-201ENST00000376957 ADGRL2O95490 1459 aa33.76■■■■□ 3
SRM-201ENST00000376957 DMRT2Q9Y5R5 561 aa33.76■■■□□ 2.99
SRM-201ENST00000376957 KANK1Q14678 1352 aa33.75■■■□□ 2.99
SRM-201ENST00000376957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.75■■■□□ 2.99
SRM-201ENST00000376957 PZPP20742 1482 aa33.74■■■□□ 2.99
SRM-201ENST00000376957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.7■■■□□ 2.99
SRM-201ENST00000376957 ABCC3O15438 1527 aa33.69■■■□□ 2.98
SRM-201ENST00000376957 TNRQ92752 1358 aa33.67■■■□□ 2.98
SRM-201ENST00000376957 MYO3AQ8NEV4 1616 aa33.67■■■□□ 2.98
SRM-201ENST00000376957 ITGAEP38570 1179 aa33.66■■■□□ 2.98
SRM-201ENST00000376957 FBXO31Q5XUX0 539 aaPredicted RBP33.66■■■□□ 2.98
SRM-201ENST00000376957 PRDM15P57071 1507 aaPredicted RBP33.65■■■□□ 2.98
SRM-201ENST00000376957 MROH1Q8NDA8 1641 aa33.64■■■□□ 2.98
SRM-201ENST00000376957 ANKRD50Q9ULJ7 1429 aa33.64■■■□□ 2.98
SRM-201ENST00000376957 ROCK1Q13464 1354 aa33.64■■■□□ 2.98
SRM-201ENST00000376957 DEPDC5O75140 1603 aa33.62■■■□□ 2.97
SRM-201ENST00000376957 CEP170BQ9Y4F5 1589 aaPredicted RBP33.62■■■□□ 2.97
SRM-201ENST00000376957 ZNF142P52746 1687 aaPredicted RBP33.61■■■□□ 2.97
SRM-201ENST00000376957 CEP152O94986 1710 aa33.6■■■□□ 2.97
SRM-201ENST00000376957 A2ML1A8K2U0 1454 aa33.59■■■□□ 2.97
SRM-201ENST00000376957 CAMSAP1Q5T5Y3 1602 aa33.59■■■□□ 2.97
SRM-201ENST00000376957 RRBP1Q9P2E9 1410 aaKnown RBP33.57■■■□□ 2.96
SRM-201ENST00000376957 NLRP1Q9C000 1473 aa33.56■■■□□ 2.96
SRM-201ENST00000376957 STRCQ7RTU9 1775 aa33.55■■■□□ 2.96
SRM-201ENST00000376957 ARHGAP31Q2M1Z3 1444 aa33.54■■■□□ 2.96
SRM-201ENST00000376957 PKD2Q13563 968 aa33.52■■■□□ 2.96
SRM-201ENST00000376957 PLA2R1Q13018 1463 aa33.51■■■□□ 2.96
SRM-201ENST00000376957 THEMISQ8N1K5 641 aaPredicted RBP33.51■■■□□ 2.95
SRM-201ENST00000376957 SPATA31D1Q6ZQQ2 1576 aa33.51■■■□□ 2.95
SRM-201ENST00000376957 ERVK-7P63135 1459 aa33.5■■■□□ 2.95
SRM-201ENST00000376957 PTPRTO14522 1441 aa33.49■■■□□ 2.95
SRM-201ENST00000376957 LMTK2Q8IWU2 1503 aa33.48■■■□□ 2.95
SRM-201ENST00000376957 CFAP65Q6ZU64 1925 aaKnown RBP33.47■■■□□ 2.95
SRM-201ENST00000376957 VWDEQ8N2E2 1590 aa33.45■■■□□ 2.95
SRM-201ENST00000376957 UGGT1Q9NYU2 1555 aa33.44■■■□□ 2.94
SRM-201ENST00000376957 NCKAP5LQ9HCH0 1330 aa33.42■■■□□ 2.94
SRM-201ENST00000376957 ANKLE2Q86XL3 938 aa33.39■■■□□ 2.94
SRM-201ENST00000376957 UNC13BO14795 1591 aa33.37■■■□□ 2.93
SRM-201ENST00000376957 EFCAB6Q5THR3 1501 aa33.37■■■□□ 2.93
SRM-201ENST00000376957 STAG3Q9UJ98 1225 aa33.36■■■□□ 2.93
SRM-201ENST00000376957 RPRD2Q5VT52 1461 aaKnown RBP33.35■■■□□ 2.93
SRM-201ENST00000376957 TET3O43151 1660 aa33.32■■■□□ 2.92
SRM-201ENST00000376957 NUP155O75694 1391 aa33.32■■■□□ 2.92
SRM-201ENST00000376957 POLR1AO95602 1720 aaPredicted RBP33.29■■■□□ 2.92
SRM-201ENST00000376957 CERKQ8TCT0 537 aa33.29■■■□□ 2.92
SRM-201ENST00000376957 SLC52A1Q9NWF4 448 aa33.29■■■□□ 2.92
SRM-201ENST00000376957 GCC2Q8IWJ2 1684 aa33.28■■■□□ 2.92
SRM-201ENST00000376957 IQGAP3Q86VI3 1631 aa33.25■■■□□ 2.91
SRM-201ENST00000376957 FBXO41Q8TF61 875 aa33.25■■■□□ 2.91
SRM-201ENST00000376957 ILDR1Q86SU0 546 aaPredicted RBP33.24■■■□□ 2.91
SRM-201ENST00000376957 NOS1P29475 1434 aa33.24■■■□□ 2.91
SRM-201ENST00000376957 UBR1Q8IWV7 1749 aa33.24■■■□□ 2.91
SRM-201ENST00000376957 EID1Q9Y6B2 187 aa33.23■■■□□ 2.91
SRM-201ENST00000376957 IDI1Q13907 227 aa33.22■■■□□ 2.91
SRM-201ENST00000376957 NAIPQ13075 1403 aa33.21■■■□□ 2.91
SRM-201ENST00000376957 HFM1A2PYH4 1435 aa33.2■■■□□ 2.91
SRM-201ENST00000376957 KDM5AP29375 1690 aaKnown RBP33.19■■■□□ 2.9
SRM-201ENST00000376957 PIK3C2BO00750 1634 aa33.18■■■□□ 2.9
SRM-201ENST00000376957 NPHP4O75161 1426 aaPredicted RBP33.17■■■□□ 2.9
SRM-201ENST00000376957 SYNMO15061 1565 aa33.17■■■□□ 2.9
SRM-201ENST00000376957 MED14O60244 1454 aa33.16■■■□□ 2.9
SRM-201ENST00000376957 TXNDC2Q86VQ3 553 aa33.15■■■□□ 2.9
SRM-201ENST00000376957 E9PCH4 1651 aa33.13■■■□□ 2.89
SRM-201ENST00000376957 NEURL4Q96JN8 1562 aa33.13■■■□□ 2.89
SRM-201ENST00000376957 TRIM52Q96A61 297 aa33.13■■■□□ 2.89
SRM-201ENST00000376957 SLIT1O75093 1534 aa33.12■■■□□ 2.89
SRM-201ENST00000376957 HDGFP51858 240 aaKnown RBP33.12■■■□□ 2.89
SRM-201ENST00000376957 SCAF11Q99590 1463 aaKnown RBP33.12■■■□□ 2.89
SRM-201ENST00000376957 TMEM2Q9UHN6 1383 aa33.11■■■□□ 2.89
SRM-201ENST00000376957 ZNF335Q9H4Z2 1342 aaPredicted RBP33.1■■■□□ 2.89
SRM-201ENST00000376957 IQGAP1P46940 1657 aa33.1■■■□□ 2.89
SRM-201ENST00000376957 ACIN1Q9UKV3 1341 aaKnown RBP33.09■■■□□ 2.89
SRM-201ENST00000376957 ARHGAP23Q9P227 1491 aa33.09■■■□□ 2.89
SRM-201ENST00000376957 ADGRB3O60242 1522 aa33.07■■■□□ 2.89
SRM-201ENST00000376957 LTBP4Q8N2S1 1624 aa33.07■■■□□ 2.88
SRM-201ENST00000376957 CHGAP10645 457 aaKnown RBP33.05■■■□□ 2.88
SRM-201ENST00000376957 IQSEC2Q5JU85 1478 aa33.05■■■□□ 2.88
SRM-201ENST00000376957 LTKP29376 864 aa33.03■■■□□ 2.88
SRM-201ENST00000376957 CPS1P31327 1500 aa32.98■■■□□ 2.87
SRM-201ENST00000376957 SLC4A1APQ9BWU0 796 aaKnown RBP32.98■■■□□ 2.87
SRM-201ENST00000376957 PPP1R15AO75807 674 aaPredicted RBP32.97■■■□□ 2.87
SRM-201ENST00000376957 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.97■■■□□ 2.87
SRM-201ENST00000376957 BCANQ96GW7 911 aa32.97■■■□□ 2.87
SRM-201ENST00000376957 SPHKAPQ2M3C7 1700 aa32.96■■■□□ 2.87
SRM-201ENST00000376957 TMEM131LA2VDJ0 1609 aa32.94■■■□□ 2.86
SRM-201ENST00000376957 RIMS2Q9UQ26 1411 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms