RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ASXL2Q76L83 1435 aa30.2■■■□□ 2.43
RNF39-202ENST00000376751 FANCAO15360 1455 aa30.2■■■□□ 2.42
RNF39-202ENST00000376751 AFAP1Q8N556 730 aa30.19■■■□□ 2.42
RNF39-202ENST00000376751 KDM2AQ9Y2K7 1162 aa30.19■■■□□ 2.42
RNF39-202ENST00000376751 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
RNF39-202ENST00000376751 SPAG9O60271 1321 aaKnown RBP30.18■■■□□ 2.42
RNF39-202ENST00000376751 DCAF11Q8TEB1 546 aa30.18■■■□□ 2.42
RNF39-202ENST00000376751 INO80Q9ULG1 1556 aaPredicted RBP30.16■■■□□ 2.42
RNF39-202ENST00000376751 OSCARQ8IYS5 282 aa30.15■■■□□ 2.42
RNF39-202ENST00000376751 ATP10AO60312 1499 aa30.12■■■□□ 2.41
RNF39-202ENST00000376751 TRPM1Q7Z4N2 1603 aa30.12■■■□□ 2.41
RNF39-202ENST00000376751 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
RNF39-202ENST00000376751 A2MP01023 1474 aa30.12■■■□□ 2.41
RNF39-202ENST00000376751 CARD11Q9BXL7 1154 aa30.11■■■□□ 2.41
RNF39-202ENST00000376751 PRAG1Q86YV5 1406 aa30.11■■■□□ 2.41
RNF39-202ENST00000376751 DEPDC5O75140 1603 aa30.09■■■□□ 2.41
RNF39-202ENST00000376751 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
RNF39-202ENST00000376751 ADGRL1O94910 1474 aa30.09■■■□□ 2.41
RNF39-202ENST00000376751 E9PCH4 1651 aa30.08■■■□□ 2.41
RNF39-202ENST00000376751 SUPT16HQ9Y5B9 1047 aaKnown RBP30.08■■■□□ 2.41
RNF39-202ENST00000376751 SCAPERQ9BY12 1400 aa30.05■■■□□ 2.4
RNF39-202ENST00000376751 CCDC184Q52MB2 194 aa30.05■■■□□ 2.4
RNF39-202ENST00000376751 RGL3Q3MIN7 710 aa30.04■■■□□ 2.4
RNF39-202ENST00000376751 DHX29Q7Z478 1369 aaKnown RBP30.03■■■□□ 2.4
RNF39-202ENST00000376751 ROCK2O75116 1388 aaKnown RBP30.03■■■□□ 2.4
RNF39-202ENST00000376751 ARID4BQ4LE39 1312 aaPredicted RBP30■■■□□ 2.39
RNF39-202ENST00000376751 ST20-MTHFSA0A0A6YYL1 179 aa29.98■■■□□ 2.39
RNF39-202ENST00000376751 POLR3GLQ9BT43 218 aa29.98■■■□□ 2.39
RNF39-202ENST00000376751 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
RNF39-202ENST00000376751 TET3O43151 1660 aa29.97■■■□□ 2.39
RNF39-202ENST00000376751 SPHKAPQ2M3C7 1700 aa29.96■■■□□ 2.39
RNF39-202ENST00000376751 TRPM2O94759 1503 aa29.96■■■□□ 2.39
RNF39-202ENST00000376751 KIDINS220Q9ULH0 1771 aa29.95■■■□□ 2.39
RNF39-202ENST00000376751 LAMC1P11047 1609 aa29.95■■■□□ 2.39
RNF39-202ENST00000376751 EIF2AK4Q9P2K8 1649 aaKnown RBP29.95■■■□□ 2.39
RNF39-202ENST00000376751 GPRASP1Q5JY77 1395 aa29.95■■■□□ 2.38
RNF39-202ENST00000376751 MROH1Q8NDA8 1641 aa29.95■■■□□ 2.38
RNF39-202ENST00000376751 NBPF1Q3BBV0 1214 aa29.94■■■□□ 2.38
RNF39-202ENST00000376751 NPM1P06748 294 aaKnown RBP eCLIP29.92■■■□□ 2.38
RNF39-202ENST00000376751 HNRNPUQ00839 825 aaKnown RBP eCLIP29.92■■■□□ 2.38
RNF39-202ENST00000376751 PRDM15P57071 1507 aaPredicted RBP29.91■■■□□ 2.38
RNF39-202ENST00000376751 PTPRTO14522 1441 aa29.91■■■□□ 2.38
RNF39-202ENST00000376751 CLTCL1P53675 1640 aa29.91■■■□□ 2.38
RNF39-202ENST00000376751 CEP152O94986 1710 aa29.9■■■□□ 2.38
RNF39-202ENST00000376751 MRS2Q9HD23 443 aa29.88■■■□□ 2.37
RNF39-202ENST00000376751 RNF17Q9BXT8 1623 aaKnown RBP29.87■■■□□ 2.37
RNF39-202ENST00000376751 MYT1LQ9UL68 1186 aa29.87■■■□□ 2.37
RNF39-202ENST00000376751 CFAP74Q9C0B2 1584 aa29.87■■■□□ 2.37
RNF39-202ENST00000376751 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
RNF39-202ENST00000376751 KIF3BO15066 747 aa29.86■■■□□ 2.37
RNF39-202ENST00000376751 CD109Q6YHK3 1445 aa29.86■■■□□ 2.37
RNF39-202ENST00000376751 MADDQ8WXG6 1647 aa29.84■■■□□ 2.37
RNF39-202ENST00000376751 KANK1Q14678 1352 aa29.84■■■□□ 2.37
RNF39-202ENST00000376751 POGZQ7Z3K3 1410 aa29.81■■■□□ 2.36
RNF39-202ENST00000376751 FAM9BQ8IZU0 186 aa29.79■■■□□ 2.36
RNF39-202ENST00000376751 CNGB1Q14028 1251 aaPredicted RBP29.77■■■□□ 2.36
RNF39-202ENST00000376751 EFCAB6Q5THR3 1501 aa29.77■■■□□ 2.36
RNF39-202ENST00000376751 COL17A1Q9UMD9 1497 aaPredicted RBP29.77■■■□□ 2.36
RNF39-202ENST00000376751 PPRC1Q5VV67 1664 aaKnown RBP29.75■■■□□ 2.35
RNF39-202ENST00000376751 FKBP8Q14318 412 aa29.75■■■□□ 2.35
RNF39-202ENST00000376751 FRMPD1Q5SYB0 1578 aa29.75■■■□□ 2.35
RNF39-202ENST00000376751 PELP1Q8IZL8 1130 aaKnown RBP29.74■■■□□ 2.35
RNF39-202ENST00000376751 HECW2Q9P2P5 1572 aa29.74■■■□□ 2.35
RNF39-202ENST00000376751 TESK2Q96S53 571 aa29.73■■■□□ 2.35
RNF39-202ENST00000376751 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
RNF39-202ENST00000376751 DISP3Q9P2K9 1392 aa29.72■■■□□ 2.35
RNF39-202ENST00000376751 MLH3Q9UHC1 1453 aa29.72■■■□□ 2.35
RNF39-202ENST00000376751 IQGAP1P46940 1657 aa29.71■■■□□ 2.35
RNF39-202ENST00000376751 LMTK2Q8IWU2 1503 aa29.7■■■□□ 2.35
RNF39-202ENST00000376751 ABCA6Q8N139 1617 aa29.7■■■□□ 2.34
RNF39-202ENST00000376751 NEURL4Q96JN8 1562 aa29.68■■■□□ 2.34
RNF39-202ENST00000376751 BCANQ96GW7 911 aa29.66■■■□□ 2.34
RNF39-202ENST00000376751 NEO1Q92859 1461 aa29.65■■■□□ 2.34
RNF39-202ENST00000376751 NEFLP07196 543 aa29.64■■■□□ 2.34
RNF39-202ENST00000376751 KIF1BO60333 1816 aa29.64■■■□□ 2.33
RNF39-202ENST00000376751 MROH2AA6NES4 1674 aa29.63■■■□□ 2.33
RNF39-202ENST00000376751 ZBED9Q6R2W3 1325 aa29.63■■■□□ 2.33
RNF39-202ENST00000376751 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
RNF39-202ENST00000376751 KIAA1210Q9ULL0 1709 aa29.59■■■□□ 2.33
RNF39-202ENST00000376751 MAP3K4Q9Y6R4 1608 aa29.59■■■□□ 2.33
RNF39-202ENST00000376751 STAC3Q96MF2 364 aa29.59■■■□□ 2.33
RNF39-202ENST00000376751 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
RNF39-202ENST00000376751 MYOM2P54296 1465 aa29.56■■■□□ 2.32
RNF39-202ENST00000376751 SCAF11Q99590 1463 aaKnown RBP29.56■■■□□ 2.32
RNF39-202ENST00000376751 RICTORQ6R327 1708 aa29.56■■■□□ 2.32
RNF39-202ENST00000376751 RAPGEF3O95398 923 aa29.55■■■□□ 2.32
RNF39-202ENST00000376751 MYBBP1AQ9BQG0 1328 aaKnown RBP29.55■■■□□ 2.32
RNF39-202ENST00000376751 DIP2CQ9Y2E4 1556 aa29.55■■■□□ 2.32
RNF39-202ENST00000376751 PER1O15534 1290 aaPredicted RBP29.55■■■□□ 2.32
RNF39-202ENST00000376751 TMF1P82094 1093 aa29.55■■■□□ 2.32
RNF39-202ENST00000376751 RALBP1Q15311 655 aa29.55■■■□□ 2.32
RNF39-202ENST00000376751 CFAP65Q6ZU64 1925 aaKnown RBP29.54■■■□□ 2.32
RNF39-202ENST00000376751 PNISRQ8TF01 805 aaKnown RBP29.53■■■□□ 2.32
RNF39-202ENST00000376751 NPATQ14207 1427 aa29.53■■■□□ 2.32
RNF39-202ENST00000376751 PARD3Q8TEW0 1356 aa29.53■■■□□ 2.32
RNF39-202ENST00000376751 ABCC3O15438 1527 aa29.53■■■□□ 2.32
RNF39-202ENST00000376751 ADGRB3O60242 1522 aa29.52■■■□□ 2.32
RNF39-202ENST00000376751 BRD4O60885 1362 aaPredicted RBP29.52■■■□□ 2.32
RNF39-202ENST00000376751 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
RNF39-202ENST00000376751 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms