RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 KDM5DQ9BY66 1539 aa29.2■■■□□ 2.27
HDAC6-202ENST00000376610 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
HDAC6-202ENST00000376610 MAP3K1Q13233 1512 aa29.19■■■□□ 2.26
HDAC6-202ENST00000376610 WASHC2CQ9Y4E1 1318 aa29.19■■■□□ 2.26
HDAC6-202ENST00000376610 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
HDAC6-202ENST00000376610 IQSEC2Q5JU85 1478 aa29.16■■■□□ 2.26
HDAC6-202ENST00000376610 TCOF1Q13428 1488 aaKnown RBP29.14■■■□□ 2.26
HDAC6-202ENST00000376610 TNRQ92752 1358 aa29.13■■■□□ 2.25
HDAC6-202ENST00000376610 PZPP20742 1482 aa29.13■■■□□ 2.25
HDAC6-202ENST00000376610 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
HDAC6-202ENST00000376610 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
HDAC6-202ENST00000376610 KANK4Q5T7N3 995 aaPredicted RBP29.11■■■□□ 2.25
HDAC6-202ENST00000376610 DNMT1P26358 1616 aaKnown RBP29.11■■■□□ 2.25
HDAC6-202ENST00000376610 MAST1Q9Y2H9 1570 aa29.1■■■□□ 2.25
HDAC6-202ENST00000376610 APLP2Q06481 763 aa29.1■■■□□ 2.25
HDAC6-202ENST00000376610 FBXO31Q5XUX0 539 aaPredicted RBP29.09■■■□□ 2.25
HDAC6-202ENST00000376610 ZNF335Q9H4Z2 1342 aaPredicted RBP29.07■■■□□ 2.24
HDAC6-202ENST00000376610 RNF17Q9BXT8 1623 aaKnown RBP29.05■■■□□ 2.24
HDAC6-202ENST00000376610 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
HDAC6-202ENST00000376610 POLR1AO95602 1720 aaPredicted RBP29.03■■■□□ 2.24
HDAC6-202ENST00000376610 ZC3H13Q5T200 1668 aaKnown RBP29.02■■■□□ 2.24
HDAC6-202ENST00000376610 NLRP1Q9C000 1473 aa29.01■■■□□ 2.23
HDAC6-202ENST00000376610 THEMISQ8N1K5 641 aaPredicted RBP28.99■■■□□ 2.23
HDAC6-202ENST00000376610 ABCC3O15438 1527 aa28.98■■■□□ 2.23
HDAC6-202ENST00000376610 DUOX2Q9NRD8 1548 aa28.96■■■□□ 2.23
HDAC6-202ENST00000376610 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
HDAC6-202ENST00000376610 UGGT1Q9NYU2 1555 aa28.96■■■□□ 2.23
HDAC6-202ENST00000376610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.22
HDAC6-202ENST00000376610 UBAP1LF5GYI3 381 aa28.94■■■□□ 2.22
HDAC6-202ENST00000376610 DISP3Q9P2K9 1392 aa28.92■■■□□ 2.22
HDAC6-202ENST00000376610 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
HDAC6-202ENST00000376610 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
HDAC6-202ENST00000376610 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
HDAC6-202ENST00000376610 CROCC2H7BZ55 1655 aa28.9■■■□□ 2.22
HDAC6-202ENST00000376610 KIF15Q9NS87 1388 aa28.89■■■□□ 2.22
HDAC6-202ENST00000376610 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.22
HDAC6-202ENST00000376610 MROH1Q8NDA8 1641 aa28.89■■■□□ 2.22
HDAC6-202ENST00000376610 CEP152O94986 1710 aa28.89■■■□□ 2.21
HDAC6-202ENST00000376610 ERVK-7P63135 1459 aa28.87■■■□□ 2.21
HDAC6-202ENST00000376610 ABCC5O15440 1437 aa28.86■■■□□ 2.21
HDAC6-202ENST00000376610 ERBINQ96RT1 1412 aa28.86■■■□□ 2.21
HDAC6-202ENST00000376610 CPS1P31327 1500 aa28.86■■■□□ 2.21
HDAC6-202ENST00000376610 DEPDC5O75140 1603 aa28.85■■■□□ 2.21
HDAC6-202ENST00000376610 CFAP65Q6ZU64 1925 aaKnown RBP28.84■■■□□ 2.21
HDAC6-202ENST00000376610 RRP7BPQ9NSQ0 103 aa28.84■■■□□ 2.21
HDAC6-202ENST00000376610 NPHP4O75161 1426 aaPredicted RBP28.84■■■□□ 2.21
HDAC6-202ENST00000376610 FGD6Q6ZV73 1430 aa28.84■■■□□ 2.21
HDAC6-202ENST00000376610 DAPK1P53355 1430 aa28.83■■■□□ 2.21
HDAC6-202ENST00000376610 MED14O60244 1454 aa28.82■■■□□ 2.2
HDAC6-202ENST00000376610 PRDM15P57071 1507 aaPredicted RBP28.81■■■□□ 2.2
HDAC6-202ENST00000376610 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
HDAC6-202ENST00000376610 KANK1Q14678 1352 aa28.78■■■□□ 2.2
HDAC6-202ENST00000376610 ANKRD30AQ9BXX3 1397 aa28.77■■■□□ 2.2
HDAC6-202ENST00000376610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.77■■■□□ 2.22e-7■■□□□ 14
HDAC6-202ENST00000376610 ARHGAP31Q2M1Z3 1444 aa28.76■■■□□ 2.19
HDAC6-202ENST00000376610 VWDEQ8N2E2 1590 aa28.75■■■□□ 2.19
HDAC6-202ENST00000376610 SCAF1Q9H7N4 1312 aaKnown RBP28.75■■■□□ 2.19
HDAC6-202ENST00000376610 TOM1O60784 492 aa28.75■■■□□ 2.19
HDAC6-202ENST00000376610 UBR1Q8IWV7 1749 aa28.74■■■□□ 2.19
HDAC6-202ENST00000376610 CHIC2Q9UKJ5 165 aa28.74■■■□□ 2.19
HDAC6-202ENST00000376610 PIP4K2BP78356 416 aa28.7■■■□□ 2.18
HDAC6-202ENST00000376610 SCAF11Q99590 1463 aaKnown RBP28.67■■■□□ 2.18
HDAC6-202ENST00000376610 ILDR2Q71H61 639 aa28.66■■■□□ 2.18
HDAC6-202ENST00000376610 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
HDAC6-202ENST00000376610 STAG3Q9UJ98 1225 aa28.65■■■□□ 2.18
HDAC6-202ENST00000376610 EID1Q9Y6B2 187 aa28.65■■■□□ 2.18
HDAC6-202ENST00000376610 SLIT1O75093 1534 aa28.64■■■□□ 2.17
HDAC6-202ENST00000376610 TXNDC2Q86VQ3 553 aa28.63■■■□□ 2.17
HDAC6-202ENST00000376610 LMTK2Q8IWU2 1503 aa28.63■■■□□ 2.17
HDAC6-202ENST00000376610 ARHGAP23Q9P227 1491 aa28.62■■■□□ 2.17
HDAC6-202ENST00000376610 SYNMO15061 1565 aa28.62■■■□□ 2.17
HDAC6-202ENST00000376610 PIK3C2BO00750 1634 aa28.61■■■□□ 2.17
HDAC6-202ENST00000376610 ADGRL2O95490 1459 aa28.6■■■□□ 2.17
HDAC6-202ENST00000376610 HSPA1LP34931 641 aa28.59■■■□□ 2.17
HDAC6-202ENST00000376610 STRCP1A6NGW2 1772 aa28.58■■■□□ 2.17
HDAC6-202ENST00000376610 LTKP29376 864 aa28.58■■■□□ 2.17
HDAC6-202ENST00000376610 SOCS7O14512 581 aa28.57■■■□□ 2.16
HDAC6-202ENST00000376610 LRRC7Q96NW7 1537 aa28.57■■■□□ 2.16
HDAC6-202ENST00000376610 KDM5AP29375 1690 aaKnown RBP28.56■■■□□ 2.16
HDAC6-202ENST00000376610 EFCAB6Q5THR3 1501 aa28.55■■■□□ 2.16
HDAC6-202ENST00000376610 TMEM2Q9UHN6 1383 aa28.55■■■□□ 2.16
HDAC6-202ENST00000376610 ANKRD50Q9ULJ7 1429 aa28.53■■■□□ 2.16
HDAC6-202ENST00000376610 IDI1Q13907 227 aa28.52■■■□□ 2.16
HDAC6-202ENST00000376610 NOS1P29475 1434 aa28.49■■■□□ 2.15
HDAC6-202ENST00000376610 SLC52A1Q9NWF4 448 aa28.48■■■□□ 2.15
HDAC6-202ENST00000376610 ALKQ9UM73 1620 aa28.47■■■□□ 2.15
HDAC6-202ENST00000376610 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
HDAC6-202ENST00000376610 ADGRB3O60242 1522 aa28.46■■■□□ 2.15
HDAC6-202ENST00000376610 TET3O43151 1660 aa28.42■■■□□ 2.14
HDAC6-202ENST00000376610 MED1Q15648 1581 aaPredicted RBP28.42■■■□□ 2.14
HDAC6-202ENST00000376610 BCANQ96GW7 911 aa28.39■■■□□ 2.14
HDAC6-202ENST00000376610 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
HDAC6-202ENST00000376610 SENP3Q9H4L4 574 aaPredicted RBP28.38■■■□□ 2.13
HDAC6-202ENST00000376610 UNC13BO14795 1591 aa28.37■■■□□ 2.13
HDAC6-202ENST00000376610 XIRP1Q702N8 1843 aaKnown RBP28.36■■■□□ 2.13
HDAC6-202ENST00000376610 KCNA6P17658 529 aa28.36■■■□□ 2.13
HDAC6-202ENST00000376610 SLC26A8Q96RN1 970 aa28.36■■■□□ 2.13
HDAC6-202ENST00000376610 ROCK1Q13464 1354 aa28.36■■■□□ 2.13
HDAC6-202ENST00000376610 HDGFP51858 240 aaKnown RBP28.35■■■□□ 2.13
HDAC6-202ENST00000376610 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms