RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 CNTLNQ9NXG0 1405 aa25.49■■□□□ 1.67
PCCA-202ENST00000376285 ATP7AQ04656 1500 aa25.49■■□□□ 1.67
PCCA-202ENST00000376285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.674e-6■□□□□ 8.4
PCCA-202ENST00000376285 POLR1AO95602 1720 aaPredicted RBP25.48■■□□□ 1.67
PCCA-202ENST00000376285 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
PCCA-202ENST00000376285 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
PCCA-202ENST00000376285 DEPDC5O75140 1603 aa25.45■■□□□ 1.66
PCCA-202ENST00000376285 PLA2R1Q13018 1463 aa25.44■■□□□ 1.66
PCCA-202ENST00000376285 CFAP74Q9C0B2 1584 aa25.43■■□□□ 1.66
PCCA-202ENST00000376285 CCDC144AA2RUR9 1427 aa25.42■■□□□ 1.66
PCCA-202ENST00000376285 KIDINS220Q9ULH0 1771 aa25.4■■□□□ 1.66
PCCA-202ENST00000376285 ATP10AO60312 1499 aa25.39■■□□□ 1.65
PCCA-202ENST00000376285 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.65
PCCA-202ENST00000376285 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.65
PCCA-202ENST00000376285 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
PCCA-202ENST00000376285 E9PCH4 1651 aa25.38■■□□□ 1.65
PCCA-202ENST00000376285 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
PCCA-202ENST00000376285 KDM5CP41229 1560 aa25.38■■□□□ 1.65
PCCA-202ENST00000376285 EIF2AK4Q9P2K8 1649 aaKnown RBP25.38■■□□□ 1.65
PCCA-202ENST00000376285 ZNF518AQ6AHZ1 1483 aa25.35■■□□□ 1.65
PCCA-202ENST00000376285 PRKRIP1Q9H875 184 aaPredicted RBP25.33■■□□□ 1.65
PCCA-202ENST00000376285 TET3O43151 1660 aa25.32■■□□□ 1.64
PCCA-202ENST00000376285 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
PCCA-202ENST00000376285 FKBP8Q14318 412 aa25.32■■□□□ 1.64
PCCA-202ENST00000376285 DCAF11Q8TEB1 546 aa25.32■■□□□ 1.64
PCCA-202ENST00000376285 USP47Q96K76 1375 aa25.32■■□□□ 1.64
PCCA-202ENST00000376285 BCORL1Q5H9F3 1711 aa25.31■■□□□ 1.64
PCCA-202ENST00000376285 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
PCCA-202ENST00000376285 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
PCCA-202ENST00000376285 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
PCCA-202ENST00000376285 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
PCCA-202ENST00000376285 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
PCCA-202ENST00000376285 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
PCCA-202ENST00000376285 TRPM1Q7Z4N2 1603 aa25.29■■□□□ 1.64
PCCA-202ENST00000376285 HNRNPUQ00839 825 aaKnown RBP eCLIP25.29■■□□□ 1.64
PCCA-202ENST00000376285 CCDC184Q52MB2 194 aa25.29■■□□□ 1.64
PCCA-202ENST00000376285 KDM2AQ9Y2K7 1162 aa25.29■■□□□ 1.64
PCCA-202ENST00000376285 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
PCCA-202ENST00000376285 MYT1LQ9UL68 1186 aa25.29■■□□□ 1.64
PCCA-202ENST00000376285 A2MP01023 1474 aa25.28■■□□□ 1.64
PCCA-202ENST00000376285 POGZQ7Z3K3 1410 aa25.28■■□□□ 1.64
PCCA-202ENST00000376285 PRAG1Q86YV5 1406 aa25.25■■□□□ 1.63
PCCA-202ENST00000376285 TRPM2O94759 1503 aa25.25■■□□□ 1.63
PCCA-202ENST00000376285 HECW2Q9P2P5 1572 aa25.25■■□□□ 1.63
PCCA-202ENST00000376285 CEP152O94986 1710 aa25.24■■□□□ 1.63
PCCA-202ENST00000376285 MAP3K4Q9Y6R4 1608 aa25.24■■□□□ 1.63
PCCA-202ENST00000376285 BCANQ96GW7 911 aa25.24■■□□□ 1.63
PCCA-202ENST00000376285 KIF3BO15066 747 aa25.23■■□□□ 1.63
PCCA-202ENST00000376285 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
PCCA-202ENST00000376285 KANK1Q14678 1352 aa25.23■■□□□ 1.63
PCCA-202ENST00000376285 NEO1Q92859 1461 aa25.23■■□□□ 1.63
PCCA-202ENST00000376285 MLH3Q9UHC1 1453 aa25.22■■□□□ 1.63
PCCA-202ENST00000376285 NEFLP07196 543 aa25.22■■□□□ 1.63
PCCA-202ENST00000376285 CARD11Q9BXL7 1154 aa25.22■■□□□ 1.63
PCCA-202ENST00000376285 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
PCCA-202ENST00000376285 PTPRTO14522 1441 aa25.2■■□□□ 1.63
PCCA-202ENST00000376285 RNF17Q9BXT8 1623 aaKnown RBP25.2■■□□□ 1.62
PCCA-202ENST00000376285 CLTCL1P53675 1640 aa25.19■■□□□ 1.62
PCCA-202ENST00000376285 FRMPD1Q5SYB0 1578 aa25.18■■□□□ 1.62
PCCA-202ENST00000376285 ABCA6Q8N139 1617 aa25.18■■□□□ 1.62
PCCA-202ENST00000376285 ROCK2O75116 1388 aaKnown RBP25.17■■□□□ 1.62
PCCA-202ENST00000376285 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
PCCA-202ENST00000376285 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
PCCA-202ENST00000376285 LAMC1P11047 1609 aa25.17■■□□□ 1.62
PCCA-202ENST00000376285 GLI2P10070 1586 aa25.16■■□□□ 1.62
PCCA-202ENST00000376285 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
PCCA-202ENST00000376285 EFCAB6Q5THR3 1501 aa25.14■■□□□ 1.62
PCCA-202ENST00000376285 PPRC1Q5VV67 1664 aaKnown RBP25.14■■□□□ 1.61
PCCA-202ENST00000376285 TSHZ2Q9NRE2 1034 aa25.13■■□□□ 1.61
PCCA-202ENST00000376285 FAM9BQ8IZU0 186 aa25.12■■□□□ 1.61
PCCA-202ENST00000376285 LMTK2Q8IWU2 1503 aa25.12■■□□□ 1.61
PCCA-202ENST00000376285 GPRASP1Q5JY77 1395 aa25.12■■□□□ 1.61
PCCA-202ENST00000376285 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
PCCA-202ENST00000376285 MADDQ8WXG6 1647 aa25.09■■□□□ 1.61
PCCA-202ENST00000376285 ST20-MTHFSA0A0A6YYL1 179 aa25.08■■□□□ 1.61
PCCA-202ENST00000376285 DIP2BQ9P265 1576 aa25.08■■□□□ 1.6
PCCA-202ENST00000376285 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
PCCA-202ENST00000376285 DIP2CQ9Y2E4 1556 aa25.07■■□□□ 1.6
PCCA-202ENST00000376285 RAPGEF3O95398 923 aa25.07■■□□□ 1.6
PCCA-202ENST00000376285 NBPF1Q3BBV0 1214 aa25.07■■□□□ 1.6
PCCA-202ENST00000376285 KIF1BO60333 1816 aa25.06■■□□□ 1.6
PCCA-202ENST00000376285 UGGT1Q9NYU2 1555 aa25.03■■□□□ 1.6
PCCA-202ENST00000376285 ZBED9Q6R2W3 1325 aa25.02■■□□□ 1.6
PCCA-202ENST00000376285 CFAP65Q6ZU64 1925 aaKnown RBP25.01■■□□□ 1.59
PCCA-202ENST00000376285 TSPOAP1O95153 1857 aa25■■□□□ 1.59
PCCA-202ENST00000376285 MROH2AA6NES4 1674 aa24.99■■□□□ 1.59
PCCA-202ENST00000376285 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
PCCA-202ENST00000376285 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
PCCA-202ENST00000376285 ABCC3O15438 1527 aa24.97■■□□□ 1.59
PCCA-202ENST00000376285 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
PCCA-202ENST00000376285 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
PCCA-202ENST00000376285 STAC3Q96MF2 364 aa24.96■■□□□ 1.59
PCCA-202ENST00000376285 CAMSAP1Q5T5Y3 1602 aa24.96■■□□□ 1.59
PCCA-202ENST00000376285 GGT6Q6P531 493 aa24.96■■□□□ 1.59
PCCA-202ENST00000376285 NPATQ14207 1427 aa24.95■■□□□ 1.59
PCCA-202ENST00000376285 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.59
PCCA-202ENST00000376285 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.58
PCCA-202ENST00000376285 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
PCCA-202ENST00000376285 ZMYM4Q5VZL5 1548 aa24.93■■□□□ 1.58
PCCA-202ENST00000376285 COL17A1Q9UMD9 1497 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms