RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 GGT6Q6P531 493 aa24.38■■□□□ 1.49
SDHB-201ENST00000375499 ABCC5O15440 1437 aa24.36■■□□□ 1.49
SDHB-201ENST00000375499 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
SDHB-201ENST00000375499 TSPY4P0CV99 314 aa24.36■■□□□ 1.49
SDHB-201ENST00000375499 TSPY10P0CW01 314 aa24.36■■□□□ 1.49
SDHB-201ENST00000375499 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
SDHB-201ENST00000375499 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.49
SDHB-201ENST00000375499 KIF3BO15066 747 aa24.33■■□□□ 1.49
SDHB-201ENST00000375499 DAPK1P53355 1430 aa24.33■■□□□ 1.49
SDHB-201ENST00000375499 PKD2Q13563 968 aa24.32■■□□□ 1.48
SDHB-201ENST00000375499 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
SDHB-201ENST00000375499 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
SDHB-201ENST00000375499 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
SDHB-201ENST00000375499 PTPRKQ15262 1439 aa24.29■■□□□ 1.48
SDHB-201ENST00000375499 EIF2AK4Q9P2K8 1649 aaKnown RBP24.28■■□□□ 1.48
SDHB-201ENST00000375499 KDM5DQ9BY66 1539 aa24.28■■□□□ 1.48
SDHB-201ENST00000375499 CAMSAP1Q5T5Y3 1602 aa24.28■■□□□ 1.48
SDHB-201ENST00000375499 MROH1Q8NDA8 1641 aa24.28■■□□□ 1.48
SDHB-201ENST00000375499 MYO3AQ8NEV4 1616 aa24.26■■□□□ 1.47
SDHB-201ENST00000375499 DUOX2Q9NRD8 1548 aa24.25■■□□□ 1.47
SDHB-201ENST00000375499 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
SDHB-201ENST00000375499 KIF15Q9NS87 1388 aa24.24■■□□□ 1.47
SDHB-201ENST00000375499 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
SDHB-201ENST00000375499 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
SDHB-201ENST00000375499 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
SDHB-201ENST00000375499 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
SDHB-201ENST00000375499 ABCC3O15438 1527 aa24.2■■□□□ 1.47
SDHB-201ENST00000375499 UBAP1LF5GYI3 381 aa24.2■■□□□ 1.46
SDHB-201ENST00000375499 CEP152O94986 1710 aa24.19■■□□□ 1.46
SDHB-201ENST00000375499 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
SDHB-201ENST00000375499 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
SDHB-201ENST00000375499 PZPP20742 1482 aa24.19■■□□□ 1.46
SDHB-201ENST00000375499 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
SDHB-201ENST00000375499 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
SDHB-201ENST00000375499 CEP170BQ9Y4F5 1589 aaPredicted RBP24.17■■□□□ 1.46
SDHB-201ENST00000375499 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
SDHB-201ENST00000375499 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
SDHB-201ENST00000375499 WASHC2CQ9Y4E1 1318 aa24.16■■□□□ 1.46
SDHB-201ENST00000375499 ADGRL2O95490 1459 aa24.16■■□□□ 1.46
SDHB-201ENST00000375499 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
SDHB-201ENST00000375499 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
SDHB-201ENST00000375499 DEPDC5O75140 1603 aa24.14■■□□□ 1.46
SDHB-201ENST00000375499 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
SDHB-201ENST00000375499 TNRQ92752 1358 aa24.1■■□□□ 1.45
SDHB-201ENST00000375499 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
SDHB-201ENST00000375499 TOM1O60784 492 aa24.07■■□□□ 1.44
SDHB-201ENST00000375499 CFAP65Q6ZU64 1925 aaKnown RBP24.06■■□□□ 1.44
SDHB-201ENST00000375499 ERVK-7P63135 1459 aa24.05■■□□□ 1.44
SDHB-201ENST00000375499 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
SDHB-201ENST00000375499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.434e-6■□□□□ 11.1
SDHB-201ENST00000375499 CPS1P31327 1500 aa24■■□□□ 1.43
SDHB-201ENST00000375499 ANKRD50Q9ULJ7 1429 aa24■■□□□ 1.43
SDHB-201ENST00000375499 THEMISQ8N1K5 641 aaPredicted RBP23.99■■□□□ 1.43
SDHB-201ENST00000375499 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
SDHB-201ENST00000375499 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
SDHB-201ENST00000375499 ARHGAP31Q2M1Z3 1444 aa23.98■■□□□ 1.43
SDHB-201ENST00000375499 LMTK2Q8IWU2 1503 aa23.98■■□□□ 1.43
SDHB-201ENST00000375499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.432e-7■■■■■ 28.8
SDHB-201ENST00000375499 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
SDHB-201ENST00000375499 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.43
SDHB-201ENST00000375499 UGGT1Q9NYU2 1555 aa23.95■■□□□ 1.43
SDHB-201ENST00000375499 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
SDHB-201ENST00000375499 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
SDHB-201ENST00000375499 HSPA1LP34931 641 aa23.94■■□□□ 1.42
SDHB-201ENST00000375499 ITGAEP38570 1179 aa23.94■■□□□ 1.42
SDHB-201ENST00000375499 UNC13BO14795 1591 aa23.94■■□□□ 1.42
SDHB-201ENST00000375499 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
SDHB-201ENST00000375499 KANK1Q14678 1352 aa23.93■■□□□ 1.42
SDHB-201ENST00000375499 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
SDHB-201ENST00000375499 UBR1Q8IWV7 1749 aa23.91■■□□□ 1.42
SDHB-201ENST00000375499 PIP4K2BP78356 416 aa23.91■■□□□ 1.42
SDHB-201ENST00000375499 SYNMO15061 1565 aa23.89■■□□□ 1.41
SDHB-201ENST00000375499 PIK3C2BO00750 1634 aa23.87■■□□□ 1.41
SDHB-201ENST00000375499 MED14O60244 1454 aa23.87■■□□□ 1.41
SDHB-201ENST00000375499 TET3O43151 1660 aa23.86■■□□□ 1.41
SDHB-201ENST00000375499 NOS1P29475 1434 aa23.84■■□□□ 1.41
SDHB-201ENST00000375499 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
SDHB-201ENST00000375499 MED1Q15648 1581 aaPredicted RBP23.83■■□□□ 1.41
SDHB-201ENST00000375499 IQGAP3Q86VI3 1631 aa23.83■■□□□ 1.41
SDHB-201ENST00000375499 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
SDHB-201ENST00000375499 E9PCH4 1651 aa23.8■■□□□ 1.4
SDHB-201ENST00000375499 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
SDHB-201ENST00000375499 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
SDHB-201ENST00000375499 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
SDHB-201ENST00000375499 IQGAP1P46940 1657 aa23.78■■□□□ 1.4
SDHB-201ENST00000375499 SLIT1O75093 1534 aa23.77■■□□□ 1.4
SDHB-201ENST00000375499 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
SDHB-201ENST00000375499 IDI1Q13907 227 aa23.75■■□□□ 1.39
SDHB-201ENST00000375499 NAIPQ13075 1403 aa23.75■■□□□ 1.39
SDHB-201ENST00000375499 ADGRB3O60242 1522 aa23.74■■□□□ 1.39
SDHB-201ENST00000375499 NUP155O75694 1391 aa23.73■■□□□ 1.39
SDHB-201ENST00000375499 SCAF11Q99590 1463 aaKnown RBP23.73■■□□□ 1.39
SDHB-201ENST00000375499 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
SDHB-201ENST00000375499 LTKP29376 864 aa23.72■■□□□ 1.39
SDHB-201ENST00000375499 TMEM2Q9UHN6 1383 aa23.69■■□□□ 1.38
SDHB-201ENST00000375499 STRCP1A6NGW2 1772 aa23.69■■□□□ 1.38
SDHB-201ENST00000375499 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
SDHB-201ENST00000375499 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
SDHB-201ENST00000375499 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
SDHB-201ENST00000375499 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms