RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
CUL4A-203ENST00000375441 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
CUL4A-203ENST00000375441 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
CUL4A-203ENST00000375441 ARXQ96QS3 562 aa17.05■□□□□ 0.32
CUL4A-203ENST00000375441 MAGI3Q5TCQ9 1506 aa17.05■□□□□ 0.32
CUL4A-203ENST00000375441 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
CUL4A-203ENST00000375441 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
CUL4A-203ENST00000375441 BECN1Q14457 450 aa17.03■□□□□ 0.32
CUL4A-203ENST00000375441 PTPRGP23470 1445 aa17.03■□□□□ 0.32
CUL4A-203ENST00000375441 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
CUL4A-203ENST00000375441 SAMD9Q5K651 1589 aa17.02■□□□□ 0.32
CUL4A-203ENST00000375441 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
CUL4A-203ENST00000375441 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
CUL4A-203ENST00000375441 IFT140Q96RY7 1462 aa17■□□□□ 0.31
CUL4A-203ENST00000375441 CENPQQ7L2Z9 268 aaPredicted RBP17■□□□□ 0.31
CUL4A-203ENST00000375441 USP35Q9P2H5 1018 aa17■□□□□ 0.31
CUL4A-203ENST00000375441 DHX29Q7Z478 1369 aaKnown RBP17■□□□□ 0.31
CUL4A-203ENST00000375441 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
CUL4A-203ENST00000375441 KDM6BO15054 1643 aa16.98■□□□□ 0.31
CUL4A-203ENST00000375441 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
CUL4A-203ENST00000375441 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
CUL4A-203ENST00000375441 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
CUL4A-203ENST00000375441 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
CUL4A-203ENST00000375441 APAF1O14727 1248 aa16.96■□□□□ 0.31
CUL4A-203ENST00000375441 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
CUL4A-203ENST00000375441 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
CUL4A-203ENST00000375441 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.3
CUL4A-203ENST00000375441 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
CUL4A-203ENST00000375441 WDR62O43379 1518 aa16.95■□□□□ 0.3
CUL4A-203ENST00000375441 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
CUL4A-203ENST00000375441 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
CUL4A-203ENST00000375441 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
CUL4A-203ENST00000375441 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
CUL4A-203ENST00000375441 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
CUL4A-203ENST00000375441 KANK1Q14678 1352 aa16.93■□□□□ 0.3
CUL4A-203ENST00000375441 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
CUL4A-203ENST00000375441 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
CUL4A-203ENST00000375441 PZPP20742 1482 aa16.92■□□□□ 0.3
CUL4A-203ENST00000375441 KIF3BO15066 747 aa16.92■□□□□ 0.3
CUL4A-203ENST00000375441 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
CUL4A-203ENST00000375441 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
CUL4A-203ENST00000375441 GCC2Q8IWJ2 1684 aa16.91■□□□□ 0.3
CUL4A-203ENST00000375441 HSP90AA1P07900 732 aaKnown RBP16.91■□□□□ 0.3
CUL4A-203ENST00000375441 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
CUL4A-203ENST00000375441 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
CUL4A-203ENST00000375441 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
CUL4A-203ENST00000375441 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
CUL4A-203ENST00000375441 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
CUL4A-203ENST00000375441 GSE1Q14687 1217 aa16.88■□□□□ 0.29
CUL4A-203ENST00000375441 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
CUL4A-203ENST00000375441 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
CUL4A-203ENST00000375441 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
CUL4A-203ENST00000375441 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 E9PSI1 815 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
CUL4A-203ENST00000375441 RAPGEF6Q8TEU7 1601 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
CUL4A-203ENST00000375441 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 KDM5BQ9UGL1 1544 aa16.87■□□□□ 0.29
CUL4A-203ENST00000375441 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
CUL4A-203ENST00000375441 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
CUL4A-203ENST00000375441 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
CUL4A-203ENST00000375441 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
CUL4A-203ENST00000375441 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
CUL4A-203ENST00000375441 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.29
CUL4A-203ENST00000375441 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.295e-9■□□□□ 10.7
CUL4A-203ENST00000375441 IL27Q8NEV9 243 aa16.83■□□□□ 0.29
CUL4A-203ENST00000375441 ARHGAP5Q13017 1502 aa16.83■□□□□ 0.28
CUL4A-203ENST00000375441 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
CUL4A-203ENST00000375441 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.28
CUL4A-203ENST00000375441 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
CUL4A-203ENST00000375441 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
CUL4A-203ENST00000375441 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
CUL4A-203ENST00000375441 GGT6Q6P531 493 aa16.81■□□□□ 0.28
CUL4A-203ENST00000375441 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
CUL4A-203ENST00000375441 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
CUL4A-203ENST00000375441 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
CUL4A-203ENST00000375441 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
CUL4A-203ENST00000375441 BCAR3O75815 825 aa16.81■□□□□ 0.28
CUL4A-203ENST00000375441 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
CUL4A-203ENST00000375441 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
CUL4A-203ENST00000375441 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
CUL4A-203ENST00000375441 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
CUL4A-203ENST00000375441 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
CUL4A-203ENST00000375441 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
CUL4A-203ENST00000375441 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
CUL4A-203ENST00000375441 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
CUL4A-203ENST00000375441 PANK1Q8TE04 598 aa16.79■□□□□ 0.28
CUL4A-203ENST00000375441 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
CUL4A-203ENST00000375441 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
CUL4A-203ENST00000375441 KIF14Q15058 1648 aa16.77■□□□□ 0.28
CUL4A-203ENST00000375441 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
CUL4A-203ENST00000375441 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.27
CUL4A-203ENST00000375441 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
CUL4A-203ENST00000375441 SRPK2P78362 688 aaKnown RBP16.75■□□□□ 0.27
CUL4A-203ENST00000375441 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
CUL4A-203ENST00000375441 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms