RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CAMSAP1Q5T5Y3 1602 aa22.27■■□□□ 1.16
NELFE-201ENST00000375425 PKD2Q13563 968 aa22.23■■□□□ 1.15
NELFE-201ENST00000375425 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
NELFE-201ENST00000375425 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
NELFE-201ENST00000375425 MYO3AQ8NEV4 1616 aa22.21■■□□□ 1.15
NELFE-201ENST00000375425 TNRQ92752 1358 aa22.21■■□□□ 1.15
NELFE-201ENST00000375425 CEP170BQ9Y4F5 1589 aaPredicted RBP22.21■■□□□ 1.15
NELFE-201ENST00000375425 PZPP20742 1482 aa22.2■■□□□ 1.14
NELFE-201ENST00000375425 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
NELFE-201ENST00000375425 ABCC5O15440 1437 aa22.19■■□□□ 1.14
NELFE-201ENST00000375425 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
NELFE-201ENST00000375425 A2ML1A8K2U0 1454 aa22.18■■□□□ 1.14
NELFE-201ENST00000375425 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
NELFE-201ENST00000375425 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
NELFE-201ENST00000375425 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
NELFE-201ENST00000375425 PTPN23Q9H3S7 1636 aa22.16■■□□□ 1.14
NELFE-201ENST00000375425 KIF15Q9NS87 1388 aa22.15■■□□□ 1.14
NELFE-201ENST00000375425 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
NELFE-201ENST00000375425 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.13
NELFE-201ENST00000375425 DUOX2Q9NRD8 1548 aa22.14■■□□□ 1.13
NELFE-201ENST00000375425 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
NELFE-201ENST00000375425 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
NELFE-201ENST00000375425 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
NELFE-201ENST00000375425 DAPK1P53355 1430 aa22.12■■□□□ 1.13
NELFE-201ENST00000375425 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
NELFE-201ENST00000375425 THEMISQ8N1K5 641 aaPredicted RBP22.12■■□□□ 1.13
NELFE-201ENST00000375425 ABCC3O15438 1527 aa22.11■■□□□ 1.13
NELFE-201ENST00000375425 SHANK2Q9UPX8 1470 aa22.11■■□□□ 1.13
NELFE-201ENST00000375425 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
NELFE-201ENST00000375425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.09■■□□□ 1.132e-7■■■■□ 20.6
NELFE-201ENST00000375425 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
NELFE-201ENST00000375425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.134e-10■■□□□ 12.8
NELFE-201ENST00000375425 NLRP1Q9C000 1473 aa22.08■■□□□ 1.13
NELFE-201ENST00000375425 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
NELFE-201ENST00000375425 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
NELFE-201ENST00000375425 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
NELFE-201ENST00000375425 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
NELFE-201ENST00000375425 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
NELFE-201ENST00000375425 CROCC2H7BZ55 1655 aa22.03■■□□□ 1.12
NELFE-201ENST00000375425 ZC3H13Q5T200 1668 aaKnown RBP22.03■■□□□ 1.12
NELFE-201ENST00000375425 ERVK-7P63135 1459 aa22.03■■□□□ 1.12
NELFE-201ENST00000375425 SPATA31D1Q6ZQQ2 1576 aa22.02■■□□□ 1.12
NELFE-201ENST00000375425 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
NELFE-201ENST00000375425 KANK1Q14678 1352 aa21.99■■□□□ 1.11
NELFE-201ENST00000375425 ARHGAP31Q2M1Z3 1444 aa21.98■■□□□ 1.11
NELFE-201ENST00000375425 PRDM15P57071 1507 aaPredicted RBP21.98■■□□□ 1.11
NELFE-201ENST00000375425 CEP152O94986 1710 aa21.98■■□□□ 1.11
NELFE-201ENST00000375425 NEURL4Q96JN8 1562 aa21.97■■□□□ 1.11
NELFE-201ENST00000375425 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
NELFE-201ENST00000375425 CFAP65Q6ZU64 1925 aaKnown RBP21.94■■□□□ 1.1
NELFE-201ENST00000375425 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
NELFE-201ENST00000375425 MED14O60244 1454 aa21.93■■□□□ 1.1
NELFE-201ENST00000375425 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
NELFE-201ENST00000375425 POLR1AO95602 1720 aaPredicted RBP21.93■■□□□ 1.1
NELFE-201ENST00000375425 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
NELFE-201ENST00000375425 DEPDC5O75140 1603 aa21.92■■□□□ 1.1
NELFE-201ENST00000375425 ANKRD50Q9ULJ7 1429 aa21.9■■□□□ 1.1
NELFE-201ENST00000375425 LTKP29376 864 aa21.89■■□□□ 1.1
NELFE-201ENST00000375425 TXNDC2Q86VQ3 553 aa21.89■■□□□ 1.1
NELFE-201ENST00000375425 IDI1Q13907 227 aa21.89■■□□□ 1.09
NELFE-201ENST00000375425 STAG3Q9UJ98 1225 aa21.89■■□□□ 1.09
NELFE-201ENST00000375425 LMTK2Q8IWU2 1503 aa21.88■■□□□ 1.09
NELFE-201ENST00000375425 VWDEQ8N2E2 1590 aa21.87■■□□□ 1.09
NELFE-201ENST00000375425 EID1Q9Y6B2 187 aa21.86■■□□□ 1.09
NELFE-201ENST00000375425 CPS1P31327 1500 aa21.86■■□□□ 1.09
NELFE-201ENST00000375425 UBR1Q8IWV7 1749 aa21.85■■□□□ 1.09
NELFE-201ENST00000375425 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.09
NELFE-201ENST00000375425 TOM1O60784 492 aa21.83■■□□□ 1.09
NELFE-201ENST00000375425 ITGAEP38570 1179 aa21.83■■□□□ 1.09
NELFE-201ENST00000375425 IQGAP1P46940 1657 aa21.83■■□□□ 1.08
NELFE-201ENST00000375425 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
NELFE-201ENST00000375425 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
NELFE-201ENST00000375425 SLIT1O75093 1534 aa21.81■■□□□ 1.08
NELFE-201ENST00000375425 TMEM2Q9UHN6 1383 aa21.81■■□□□ 1.08
NELFE-201ENST00000375425 NOS1P29475 1434 aa21.81■■□□□ 1.08
NELFE-201ENST00000375425 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
NELFE-201ENST00000375425 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
NELFE-201ENST00000375425 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
NELFE-201ENST00000375425 EFCAB6Q5THR3 1501 aa21.79■■□□□ 1.08
NELFE-201ENST00000375425 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
NELFE-201ENST00000375425 PIK3C2BO00750 1634 aa21.78■■□□□ 1.08
NELFE-201ENST00000375425 SYNMO15061 1565 aa21.76■■□□□ 1.07
NELFE-201ENST00000375425 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
NELFE-201ENST00000375425 LRRC7Q96NW7 1537 aa21.73■■□□□ 1.07
NELFE-201ENST00000375425 HSPA1LP34931 641 aa21.72■■□□□ 1.07
NELFE-201ENST00000375425 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
NELFE-201ENST00000375425 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
NELFE-201ENST00000375425 NUP155O75694 1391 aa21.7■■□□□ 1.06
NELFE-201ENST00000375425 KDM5AP29375 1690 aaKnown RBP21.69■■□□□ 1.06
NELFE-201ENST00000375425 BCANQ96GW7 911 aa21.68■■□□□ 1.06
NELFE-201ENST00000375425 TET3O43151 1660 aa21.68■■□□□ 1.06
NELFE-201ENST00000375425 UNC13BO14795 1591 aa21.67■■□□□ 1.06
NELFE-201ENST00000375425 ADGRB3O60242 1522 aa21.67■■□□□ 1.06
NELFE-201ENST00000375425 ILDR2Q71H61 639 aa21.67■■□□□ 1.06
NELFE-201ENST00000375425 CHGAP10645 457 aaKnown RBP21.66■■□□□ 1.06
NELFE-201ENST00000375425 KCNA6P17658 529 aa21.65■■□□□ 1.06
NELFE-201ENST00000375425 HDGFP51858 240 aaKnown RBP21.65■■□□□ 1.06
NELFE-201ENST00000375425 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
NELFE-201ENST00000375425 ALKQ9UM73 1620 aa21.63■■□□□ 1.05
NELFE-201ENST00000375425 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms