RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 MED14O60244 1454 aa29.07■■■□□ 2.24
H2AFX-201ENST00000375167 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
H2AFX-201ENST00000375167 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
H2AFX-201ENST00000375167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.06■■■□□ 2.246e-6■■□□□ 11.4
H2AFX-201ENST00000375167 STRCP1A6NGW2 1772 aa29.05■■■□□ 2.24
H2AFX-201ENST00000375167 HNRNPMP52272 730 aaKnown RBP eCLIP29.03■■■□□ 2.24
H2AFX-201ENST00000375167 POTEAQ6S8J7 498 aa29.03■■■□□ 2.24
H2AFX-201ENST00000375167 THEMISQ8N1K5 641 aaPredicted RBP29.02■■■□□ 2.24
H2AFX-201ENST00000375167 PLEKHH2Q8IVE3 1493 aa29.01■■■□□ 2.23
H2AFX-201ENST00000375167 SETD1AO15047 1707 aaKnown RBP29.01■■■□□ 2.23
H2AFX-201ENST00000375167 KIAA1107Q9UPP5 1409 aa29■■■□□ 2.23
H2AFX-201ENST00000375167 FAM135AQ9P2D6 1515 aa28.99■■■□□ 2.23
H2AFX-201ENST00000375167 PZPP20742 1482 aa28.99■■■□□ 2.23
H2AFX-201ENST00000375167 UGGT1Q9NYU2 1555 aa28.99■■■□□ 2.23
H2AFX-201ENST00000375167 NLRP1Q9C000 1473 aa28.98■■■□□ 2.23
H2AFX-201ENST00000375167 FBXO31Q5XUX0 539 aaPredicted RBP28.97■■■□□ 2.23
H2AFX-201ENST00000375167 UBTFP17480 764 aaKnown RBP28.96■■■□□ 2.23
H2AFX-201ENST00000375167 GPATCH8Q9UKJ3 1502 aaKnown RBP28.95■■■□□ 2.22
H2AFX-201ENST00000375167 KDM5DQ9BY66 1539 aa28.93■■■□□ 2.22
H2AFX-201ENST00000375167 CASKIN1Q8WXD9 1431 aa28.9■■■□□ 2.22
H2AFX-201ENST00000375167 MIA2Q96PC5 1412 aa28.89■■■□□ 2.22
H2AFX-201ENST00000375167 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
H2AFX-201ENST00000375167 CFDP1Q9UEE9 299 aaPredicted RBP28.86■■■□□ 2.21
H2AFX-201ENST00000375167 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
H2AFX-201ENST00000375167 FAM135BQ49AJ0 1406 aa28.82■■■□□ 2.2
H2AFX-201ENST00000375167 DHX29Q7Z478 1369 aaKnown RBP28.82■■■□□ 2.2
H2AFX-201ENST00000375167 XIRP1Q702N8 1843 aaKnown RBP28.82■■■□□ 2.2
H2AFX-201ENST00000375167 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
H2AFX-201ENST00000375167 KIF3BO15066 747 aa28.78■■■□□ 2.2
H2AFX-201ENST00000375167 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
H2AFX-201ENST00000375167 CCNB3Q8WWL7 1395 aa28.78■■■□□ 2.2
H2AFX-201ENST00000375167 FYCO1Q9BQS8 1478 aa28.75■■■□□ 2.19
H2AFX-201ENST00000375167 ROBO1Q9Y6N7 1651 aa28.73■■■□□ 2.19
H2AFX-201ENST00000375167 UPF1Q92900 1129 aaKnown RBP eCLIP28.71■■■□□ 2.191e-12■■■■■ 49.9
H2AFX-201ENST00000375167 SCAF11Q99590 1463 aaKnown RBP28.7■■■□□ 2.18
H2AFX-201ENST00000375167 MBD5Q9P267 1494 aa28.68■■■□□ 2.18
H2AFX-201ENST00000375167 UBR1Q8IWV7 1749 aa28.65■■■□□ 2.18
H2AFX-201ENST00000375167 LRRC9Q6ZRR7 1453 aa28.63■■■□□ 2.17
H2AFX-201ENST00000375167 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
H2AFX-201ENST00000375167 ERVK-7P63135 1459 aa28.6■■■□□ 2.17
H2AFX-201ENST00000375167 PHLPP1O60346 1717 aa28.59■■■□□ 2.17
H2AFX-201ENST00000375167 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
H2AFX-201ENST00000375167 JCADQ9P266 1359 aa28.58■■■□□ 2.17
H2AFX-201ENST00000375167 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
H2AFX-201ENST00000375167 CCDC141Q6ZP82 1450 aa28.57■■■□□ 2.16
H2AFX-201ENST00000375167 MTUS2Q5JR59 1369 aa28.56■■■□□ 2.16
H2AFX-201ENST00000375167 ABCC3O15438 1527 aa28.55■■■□□ 2.16
H2AFX-201ENST00000375167 SLIT1O75093 1534 aa28.55■■■□□ 2.16
H2AFX-201ENST00000375167 ARHGAP23Q9P227 1491 aa28.55■■■□□ 2.16
H2AFX-201ENST00000375167 TRIM52Q96A61 297 aa28.55■■■□□ 2.16
H2AFX-201ENST00000375167 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
H2AFX-201ENST00000375167 TXNDC2Q86VQ3 553 aa28.54■■■□□ 2.16
H2AFX-201ENST00000375167 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
H2AFX-201ENST00000375167 LTKP29376 864 aa28.52■■■□□ 2.16
H2AFX-201ENST00000375167 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
H2AFX-201ENST00000375167 MAP3K1Q13233 1512 aa28.52■■■□□ 2.16
H2AFX-201ENST00000375167 EID1Q9Y6B2 187 aa28.5■■■□□ 2.15
H2AFX-201ENST00000375167 MEX3CQ5U5Q3 659 aaKnown RBP28.47■■■□□ 2.15
H2AFX-201ENST00000375167 CFAP65Q6ZU64 1925 aaKnown RBP28.47■■■□□ 2.15
H2AFX-201ENST00000375167 LRP6O75581 1613 aa28.44■■■□□ 2.14
H2AFX-201ENST00000375167 PROSER2Q86WR7 435 aaPredicted RBP28.44■■■□□ 2.14
H2AFX-201ENST00000375167 COL16A1Q07092 1604 aaPredicted RBP28.43■■■□□ 2.14
H2AFX-201ENST00000375167 EHBP1L1Q8N3D4 1523 aa28.42■■■□□ 2.14
H2AFX-201ENST00000375167 KCNA6P17658 529 aa28.42■■■□□ 2.14
H2AFX-201ENST00000375167 RSPH4AQ5TD94 716 aa28.42■■■□□ 2.14
H2AFX-201ENST00000375167 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
H2AFX-201ENST00000375167 MSH6P52701 1360 aa28.42■■■□□ 2.14
H2AFX-201ENST00000375167 CAMSAP2Q08AD1 1489 aa28.41■■■□□ 2.14
H2AFX-201ENST00000375167 PRDM15P57071 1507 aaPredicted RBP28.41■■■□□ 2.14
H2AFX-201ENST00000375167 CEP152O94986 1710 aa28.41■■■□□ 2.14
H2AFX-201ENST00000375167 CDK12Q9NYV4 1490 aaPredicted RBP28.41■■■□□ 2.14
H2AFX-201ENST00000375167 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
H2AFX-201ENST00000375167 RXRBP28702 533 aa28.39■■■□□ 2.14
H2AFX-201ENST00000375167 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.14
H2AFX-201ENST00000375167 FGD6Q6ZV73 1430 aa28.38■■■□□ 2.13
H2AFX-201ENST00000375167 SRCAPQ6ZRS2 3230 aa28.38■■■□□ 2.13
H2AFX-201ENST00000375167 RBM33Q96EV2 1170 aaKnown RBP28.37■■■□□ 2.13
H2AFX-201ENST00000375167 SLAIN2Q9P270 581 aa28.37■■■□□ 2.13
H2AFX-201ENST00000375167 NWD1Q149M9 1564 aa28.35■■■□□ 2.13
H2AFX-201ENST00000375167 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
H2AFX-201ENST00000375167 TMEM2Q9UHN6 1383 aa28.35■■■□□ 2.13
H2AFX-201ENST00000375167 ARHGEF5Q12774 1597 aa28.34■■■□□ 2.13
H2AFX-201ENST00000375167 PIK3C2BO00750 1634 aa28.34■■■□□ 2.13
H2AFX-201ENST00000375167 MROH1Q8NDA8 1641 aa28.34■■■□□ 2.13
H2AFX-201ENST00000375167 SHPRHQ149N8 1683 aa28.33■■■□□ 2.12
H2AFX-201ENST00000375167 TSPY4P0CV99 314 aa28.32■■■□□ 2.12
H2AFX-201ENST00000375167 TSPY10P0CW01 314 aa28.32■■■□□ 2.12
H2AFX-201ENST00000375167 SLC26A8Q96RN1 970 aa28.28■■■□□ 2.12
H2AFX-201ENST00000375167 STAG3Q9UJ98 1225 aa28.28■■■□□ 2.12
H2AFX-201ENST00000375167 KDM5AP29375 1690 aaKnown RBP28.28■■■□□ 2.12
H2AFX-201ENST00000375167 TET3O43151 1660 aa28.27■■■□□ 2.12
H2AFX-201ENST00000375167 EFCAB6Q5THR3 1501 aa28.26■■■□□ 2.11
H2AFX-201ENST00000375167 ARHGAP31Q2M1Z3 1444 aa28.25■■■□□ 2.11
H2AFX-201ENST00000375167 MAST1Q9Y2H9 1570 aa28.23■■■□□ 2.11
H2AFX-201ENST00000375167 AHDC1Q5TGY3 1603 aaPredicted RBP28.23■■■□□ 2.11
H2AFX-201ENST00000375167 FOXD1Q16676 465 aa28.19■■■□□ 2.1
H2AFX-201ENST00000375167 RGS12O14924 1447 aa28.18■■■□□ 2.1
H2AFX-201ENST00000375167 AFF2P51816 1311 aa28.16■■■□□ 2.1
H2AFX-201ENST00000375167 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
H2AFX-201ENST00000375167 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms