RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 FOXD4L6Q3SYB3 417 aaPredicted RBP24.53■■□□□ 1.52
COL15A1-201ENST00000375001 FOXD4L3Q6VB84 417 aaPredicted RBP24.53■■□□□ 1.52
COL15A1-201ENST00000375001 PDE3BQ13370 1112 aa24.53■■□□□ 1.52
COL15A1-201ENST00000375001 FAM43AQ8N2R8 423 aa24.52■■□□□ 1.52
COL15A1-201ENST00000375001 FAM161AQ3B820 660 aa24.52■■□□□ 1.52
COL15A1-201ENST00000375001 PRKRIP1Q9H875 184 aaPredicted RBP24.52■■□□□ 1.52
COL15A1-201ENST00000375001 SMC4Q9NTJ3 1288 aa24.52■■□□□ 1.52
COL15A1-201ENST00000375001 KANK1Q14678 1352 aa24.52■■□□□ 1.52
COL15A1-201ENST00000375001 GOLGA6L19H0YKK7 550 aa24.5■■□□□ 1.51
COL15A1-201ENST00000375001 TEX35Q5T0J7 233 aa24.49■■□□□ 1.51
COL15A1-201ENST00000375001 RASSF8Q8NHQ8 419 aa24.49■■□□□ 1.51
COL15A1-201ENST00000375001 FHOD3Q2V2M9 1422 aa24.49■■□□□ 1.51
COL15A1-201ENST00000375001 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.49■■□□□ 1.51
COL15A1-201ENST00000375001 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
COL15A1-201ENST00000375001 PLIN1O60240 522 aa24.49■■□□□ 1.51
COL15A1-201ENST00000375001 SF3A1Q15459 793 aaKnown RBP24.48■■□□□ 1.51
COL15A1-201ENST00000375001 ANO8Q9HCE9 1232 aaPredicted RBP24.48■■□□□ 1.51
COL15A1-201ENST00000375001 KIF16BQ96L93 1317 aa24.48■■□□□ 1.51
COL15A1-201ENST00000375001 BECN2A8MW95 431 aa24.47■■□□□ 1.51
COL15A1-201ENST00000375001 STK26Q9P289 416 aa24.47■■□□□ 1.51
COL15A1-201ENST00000375001 ZBED9Q6R2W3 1325 aa24.45■■□□□ 1.51
COL15A1-201ENST00000375001 ANKRD30AQ9BXX3 1397 aa24.45■■□□□ 1.5
COL15A1-201ENST00000375001 PES1O00541 588 aaKnown RBP24.45■■□□□ 1.5
COL15A1-201ENST00000375001 PRM3Q9NNZ6 103 aa24.43■■□□□ 1.5
COL15A1-201ENST00000375001 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
COL15A1-201ENST00000375001 CENPJQ9HC77 1338 aaPredicted RBP24.43■■□□□ 1.5
COL15A1-201ENST00000375001 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
COL15A1-201ENST00000375001 CEP89Q96ST8 783 aa24.42■■□□□ 1.5
COL15A1-201ENST00000375001 HMMRO75330 724 aa24.42■■□□□ 1.5
COL15A1-201ENST00000375001 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
COL15A1-201ENST00000375001 ST20-MTHFSA0A0A6YYL1 179 aa24.42■■□□□ 1.5
COL15A1-201ENST00000375001 CENPQQ7L2Z9 268 aaPredicted RBP24.42■■□□□ 1.5
COL15A1-201ENST00000375001 RRP1P56182 461 aaKnown RBP24.41■■□□□ 1.5
COL15A1-201ENST00000375001 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
COL15A1-201ENST00000375001 GPATCH3Q96I76 525 aa24.39■■□□□ 1.5
COL15A1-201ENST00000375001 GGT6Q6P531 493 aa24.38■■□□□ 1.49
COL15A1-201ENST00000375001 TSR1Q2NL82 804 aaKnown RBP24.38■■□□□ 1.49
COL15A1-201ENST00000375001 CCDC70Q6NSX1 233 aa24.37■■□□□ 1.49
COL15A1-201ENST00000375001 CRBNQ96SW2 442 aa24.37■■□□□ 1.49
COL15A1-201ENST00000375001 R3HCC1Q9Y3T6 440 aaKnown RBP24.37■■□□□ 1.49
COL15A1-201ENST00000375001 TPD52L1Q16890 204 aaPredicted RBP24.37■■□□□ 1.49
COL15A1-201ENST00000375001 ATP6V1DQ9Y5K8 247 aa24.36■■□□□ 1.49
COL15A1-201ENST00000375001 APPP05067 770 aa24.36■■□□□ 1.49
COL15A1-201ENST00000375001 GORABQ5T7V8 394 aa24.36■■□□□ 1.49
COL15A1-201ENST00000375001 H3BQV1 296 aa24.35■■□□□ 1.49
COL15A1-201ENST00000375001 IFFO2Q5TF58 517 aa24.35■■□□□ 1.49
COL15A1-201ENST00000375001 SLC4A10Q6U841 1118 aa24.35■■□□□ 1.49
COL15A1-201ENST00000375001 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
COL15A1-201ENST00000375001 HOMER1Q86YM7 354 aa24.35■■□□□ 1.49
COL15A1-201ENST00000375001 KIF3AQ9Y496 699 aa24.35■■□□□ 1.49
COL15A1-201ENST00000375001 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
COL15A1-201ENST00000375001 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
COL15A1-201ENST00000375001 NOM1Q5C9Z4 860 aaKnown RBP24.34■■□□□ 1.49
COL15A1-201ENST00000375001 PANK3Q9H999 370 aa24.33■■□□□ 1.49
COL15A1-201ENST00000375001 RRP7AQ9Y3A4 280 aaKnown RBP24.32■■□□□ 1.48
COL15A1-201ENST00000375001 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
COL15A1-201ENST00000375001 CHMP5Q9NZZ3 219 aa24.31■■□□□ 1.48
COL15A1-201ENST00000375001 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
COL15A1-201ENST00000375001 TPM1P09493 284 aa24.31■■□□□ 1.48
COL15A1-201ENST00000375001 BCL11BQ9C0K0 894 aaPredicted RBP24.31■■□□□ 1.48
COL15A1-201ENST00000375001 NFKBIBQ15653 356 aa24.3■■□□□ 1.48
COL15A1-201ENST00000375001 PODXL2Q9NZ53 605 aa24.3■■□□□ 1.48
COL15A1-201ENST00000375001 CHMP3Q9Y3E7 222 aa24.29■■□□□ 1.48
COL15A1-201ENST00000375001 MAP7D2Q96T17 732 aa24.28■■□□□ 1.48
COL15A1-201ENST00000375001 BCL2L13Q9BXK5 485 aa24.28■■□□□ 1.48
COL15A1-201ENST00000375001 FAM184AQ8NB25 1140 aa24.28■■□□□ 1.48
COL15A1-201ENST00000375001 ZNF330Q9Y3S2 320 aaPredicted RBP24.28■■□□□ 1.48
COL15A1-201ENST00000375001 ANKRD45Q5TZF3 282 aa24.28■■□□□ 1.48
COL15A1-201ENST00000375001 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
COL15A1-201ENST00000375001 BRPF3Q9ULD4 1205 aa24.27■■□□□ 1.48
COL15A1-201ENST00000375001 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
COL15A1-201ENST00000375001 IL27Q8NEV9 243 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 IFT57Q9NWB7 429 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 EIF3AQ14152 1382 aaKnown RBP24.26■■□□□ 1.47
COL15A1-201ENST00000375001 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 MLECQ14165 292 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 TAF7LQ5H9L4 462 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 MTERF4Q7Z6M4 381 aaKnown RBP24.26■■□□□ 1.47
COL15A1-201ENST00000375001 TOMM22Q9NS69 142 aa24.26■■□□□ 1.47
COL15A1-201ENST00000375001 RRP12Q5JTH9 1297 aaKnown RBP24.25■■□□□ 1.47
COL15A1-201ENST00000375001 ARGLU1Q9NWB6 273 aaPredicted RBP24.25■■□□□ 1.47
COL15A1-201ENST00000375001 USP47Q96K76 1375 aa24.25■■□□□ 1.47
COL15A1-201ENST00000375001 PRKCSHP14314 528 aaPredicted RBP24.24■■□□□ 1.47
COL15A1-201ENST00000375001 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
COL15A1-201ENST00000375001 MNS1Q8NEH6 495 aa24.23■■□□□ 1.47
COL15A1-201ENST00000375001 MCTP1Q6DN14 999 aa24.23■■□□□ 1.47
COL15A1-201ENST00000375001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.22■■□□□ 1.47
COL15A1-201ENST00000375001 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
COL15A1-201ENST00000375001 MRE11P49959 708 aa24.21■■□□□ 1.47
COL15A1-201ENST00000375001 IPO7O95373 1038 aaKnown RBP24.21■■□□□ 1.47
COL15A1-201ENST00000375001 DIAPH3Q9NSV4 1193 aa24.21■■□□□ 1.47
COL15A1-201ENST00000375001 CCDC66A2RUB6 948 aa24.2■■□□□ 1.46
COL15A1-201ENST00000375001 RBM10P98175 930 aaKnown RBP24.2■■□□□ 1.46
COL15A1-201ENST00000375001 EFCAB2Q5VUJ9 269 aa24.2■■□□□ 1.46
COL15A1-201ENST00000375001 HSP90B2PQ58FF3 399 aa24.19■■□□□ 1.46
COL15A1-201ENST00000375001 TPM2P07951 284 aa24.19■■□□□ 1.46
COL15A1-201ENST00000375001 KIF3BO15066 747 aa24.18■■□□□ 1.46
COL15A1-201ENST00000375001 SPAG9O60271 1321 aaKnown RBP24.18■■□□□ 1.46
COL15A1-201ENST00000375001 HDAC5Q9UQL6 1122 aa24.18■■□□□ 1.46
COL15A1-201ENST00000375001 MARCH6O60337 910 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms