RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
PFDN6-201ENST00000374606 HNRNPMP52272 730 aaKnown RBP eCLIP26.39■■□□□ 1.82
PFDN6-201ENST00000374606 ADGBQ8N7X0 1667 aa26.38■■□□□ 1.81
PFDN6-201ENST00000374606 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
PFDN6-201ENST00000374606 ZMYM3Q14202 1370 aa26.37■■□□□ 1.81
PFDN6-201ENST00000374606 RSPH4AQ5TD94 716 aa26.37■■□□□ 1.81
PFDN6-201ENST00000374606 SPAG9O60271 1321 aaKnown RBP26.36■■□□□ 1.81
PFDN6-201ENST00000374606 MAST1Q9Y2H9 1570 aa26.34■■□□□ 1.81
PFDN6-201ENST00000374606 ZNF142P52746 1687 aaPredicted RBP26.32■■□□□ 1.8
PFDN6-201ENST00000374606 ATP7AQ04656 1500 aa26.32■■□□□ 1.8
PFDN6-201ENST00000374606 CLTCQ00610 1675 aaKnown RBP26.31■■□□□ 1.8
PFDN6-201ENST00000374606 MYO3AQ8NEV4 1616 aa26.31■■□□□ 1.8
PFDN6-201ENST00000374606 ADGRL2O95490 1459 aa26.3■■□□□ 1.8
PFDN6-201ENST00000374606 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
PFDN6-201ENST00000374606 NCKAP5LQ9HCH0 1330 aa26.3■■□□□ 1.8
PFDN6-201ENST00000374606 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
PFDN6-201ENST00000374606 TSPY4P0CV99 314 aa26.29■■□□□ 1.8
PFDN6-201ENST00000374606 TSPY10P0CW01 314 aa26.29■■□□□ 1.8
PFDN6-201ENST00000374606 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
PFDN6-201ENST00000374606 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
PFDN6-201ENST00000374606 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
PFDN6-201ENST00000374606 ZNF335Q9H4Z2 1342 aaPredicted RBP26.28■■□□□ 1.8
PFDN6-201ENST00000374606 ROCK1Q13464 1354 aa26.28■■□□□ 1.8
PFDN6-201ENST00000374606 PKD2Q13563 968 aa26.27■■□□□ 1.8
PFDN6-201ENST00000374606 A2MP01023 1474 aa26.27■■□□□ 1.8
PFDN6-201ENST00000374606 CEP170BQ9Y4F5 1589 aaPredicted RBP26.27■■□□□ 1.8
PFDN6-201ENST00000374606 UBAP1LF5GYI3 381 aa26.25■■□□□ 1.79
PFDN6-201ENST00000374606 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
PFDN6-201ENST00000374606 ANKRD30AQ9BXX3 1397 aa26.24■■□□□ 1.79
PFDN6-201ENST00000374606 RTEL1-TNFRSF6BF6WH68 1400 aa26.22■■□□□ 1.79
PFDN6-201ENST00000374606 GGT6Q6P531 493 aa26.2■■□□□ 1.78
PFDN6-201ENST00000374606 NAIPQ13075 1403 aa26.2■■□□□ 1.78
PFDN6-201ENST00000374606 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
PFDN6-201ENST00000374606 RRP7BPQ9NSQ0 103 aa26.18■■□□□ 1.78
PFDN6-201ENST00000374606 PPP6R1Q9UPN7 881 aa26.18■■□□□ 1.78
PFDN6-201ENST00000374606 KIF15Q9NS87 1388 aa26.16■■□□□ 1.78
PFDN6-201ENST00000374606 A2ML1A8K2U0 1454 aa26.14■■□□□ 1.78
PFDN6-201ENST00000374606 RAB3GAP2Q9H2M9 1393 aa26.12■■□□□ 1.77
PFDN6-201ENST00000374606 DUOX2Q9NRD8 1548 aa26.11■■□□□ 1.77
PFDN6-201ENST00000374606 ANKRD50Q9ULJ7 1429 aa26.08■■□□□ 1.77
PFDN6-201ENST00000374606 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
PFDN6-201ENST00000374606 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
PFDN6-201ENST00000374606 CPS1P31327 1500 aa26.04■■□□□ 1.76
PFDN6-201ENST00000374606 DHX29Q7Z478 1369 aaKnown RBP26.03■■□□□ 1.76
PFDN6-201ENST00000374606 TNRQ92752 1358 aa26.03■■□□□ 1.76
PFDN6-201ENST00000374606 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
PFDN6-201ENST00000374606 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
PFDN6-201ENST00000374606 FAM135AQ9P2D6 1515 aa26.01■■□□□ 1.75
PFDN6-201ENST00000374606 EIF2AK4Q9P2K8 1649 aaKnown RBP26.01■■□□□ 1.75
PFDN6-201ENST00000374606 KDM5DQ9BY66 1539 aa25.99■■□□□ 1.75
PFDN6-201ENST00000374606 PZPP20742 1482 aa25.99■■□□□ 1.75
PFDN6-201ENST00000374606 HRCP23327 699 aa25.99■■□□□ 1.75
PFDN6-201ENST00000374606 HSPA1LP34931 641 aa25.99■■□□□ 1.75
PFDN6-201ENST00000374606 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
PFDN6-201ENST00000374606 TOM1O60784 492 aa25.98■■□□□ 1.75
PFDN6-201ENST00000374606 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
PFDN6-201ENST00000374606 KIF3BO15066 747 aa25.96■■□□□ 1.75
PFDN6-201ENST00000374606 FBXO31Q5XUX0 539 aaPredicted RBP25.96■■□□□ 1.75
PFDN6-201ENST00000374606 ACIN1Q9UKV3 1341 aaKnown RBP25.95■■□□□ 1.75
PFDN6-201ENST00000374606 UNC13BO14795 1591 aa25.95■■□□□ 1.74
PFDN6-201ENST00000374606 ANKLE2Q86XL3 938 aa25.92■■□□□ 1.74
PFDN6-201ENST00000374606 DEPDC5O75140 1603 aa25.91■■□□□ 1.74
PFDN6-201ENST00000374606 NLRP1Q9C000 1473 aa25.91■■□□□ 1.74
PFDN6-201ENST00000374606 VWDEQ8N2E2 1590 aa25.9■■□□□ 1.74
PFDN6-201ENST00000374606 WASHC2CQ9Y4E1 1318 aa25.9■■□□□ 1.74
PFDN6-201ENST00000374606 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
PFDN6-201ENST00000374606 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
PFDN6-201ENST00000374606 UGGT1Q9NYU2 1555 aa25.88■■□□□ 1.73
PFDN6-201ENST00000374606 NPHP4O75161 1426 aaPredicted RBP25.88■■□□□ 1.73
PFDN6-201ENST00000374606 MED14O60244 1454 aa25.87■■□□□ 1.73
PFDN6-201ENST00000374606 TRIM52Q96A61 297 aa25.87■■□□□ 1.73
PFDN6-201ENST00000374606 PRDM15P57071 1507 aaPredicted RBP25.85■■□□□ 1.73
PFDN6-201ENST00000374606 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.73
PFDN6-201ENST00000374606 IQGAP3Q86VI3 1631 aa25.83■■□□□ 1.73
PFDN6-201ENST00000374606 MROH1Q8NDA8 1641 aa25.83■■□□□ 1.73
PFDN6-201ENST00000374606 IQGAP1P46940 1657 aa25.82■■□□□ 1.72
PFDN6-201ENST00000374606 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
PFDN6-201ENST00000374606 NUP155O75694 1391 aa25.81■■□□□ 1.72
PFDN6-201ENST00000374606 PHF23Q9BUL5 403 aaPredicted RBP25.8■■□□□ 1.72
PFDN6-201ENST00000374606 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
PFDN6-201ENST00000374606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.77■■□□□ 1.722e-9■□□□□ 9.3
PFDN6-201ENST00000374606 KANK1Q14678 1352 aa25.77■■□□□ 1.72
PFDN6-201ENST00000374606 ZC3H13Q5T200 1668 aaKnown RBP25.77■■□□□ 1.72
PFDN6-201ENST00000374606 SYNMO15061 1565 aa25.75■■□□□ 1.71
PFDN6-201ENST00000374606 ABCC3O15438 1527 aa25.75■■□□□ 1.71
PFDN6-201ENST00000374606 STRCP1A6NGW2 1772 aa25.74■■□□□ 1.71
PFDN6-201ENST00000374606 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
PFDN6-201ENST00000374606 CEP152O94986 1710 aa25.72■■□□□ 1.71
PFDN6-201ENST00000374606 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
PFDN6-201ENST00000374606 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
PFDN6-201ENST00000374606 TET3O43151 1660 aa25.71■■□□□ 1.71
PFDN6-201ENST00000374606 ERVK-7P63135 1459 aa25.71■■□□□ 1.71
PFDN6-201ENST00000374606 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
PFDN6-201ENST00000374606 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
PFDN6-201ENST00000374606 EFCAB6Q5THR3 1501 aa25.65■■□□□ 1.7
PFDN6-201ENST00000374606 UBR1Q8IWV7 1749 aa25.65■■□□□ 1.7
PFDN6-201ENST00000374606 SCAF11Q99590 1463 aaKnown RBP25.64■■□□□ 1.69
PFDN6-201ENST00000374606 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
PFDN6-201ENST00000374606 E9PCH4 1651 aa25.63■■□□□ 1.69
PFDN6-201ENST00000374606 CFAP65Q6ZU64 1925 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms