RNA–Protein interactions for RNA: ENST00000374255.6

PTBP3-204, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PTBP3, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-204ENST00000374255 DNMT1P26358 1616 aaKnown RBP10.53□□□□□ -0.72
PTBP3-204ENST00000374255 KANK1Q14678 1352 aa10.53□□□□□ -0.72
PTBP3-204ENST00000374255 PZPP20742 1482 aa10.53□□□□□ -0.72
PTBP3-204ENST00000374255 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.72
PTBP3-204ENST00000374255 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.72
PTBP3-204ENST00000374255 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.72
PTBP3-204ENST00000374255 RAPGEF3O95398 923 aa10.52□□□□□ -0.73
PTBP3-204ENST00000374255 PANK3Q9H999 370 aa10.52□□□□□ -0.73
PTBP3-204ENST00000374255 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
PTBP3-204ENST00000374255 WDR43Q15061 677 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTBP3-204ENST00000374255 STK26Q9P289 416 aa10.5□□□□□ -0.73
PTBP3-204ENST00000374255 CCDC136Q96JN2 1154 aa10.49□□□□□ -0.73
PTBP3-204ENST00000374255 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
PTBP3-204ENST00000374255 ITSN2Q9NZM3 1697 aa10.49□□□□□ -0.73
PTBP3-204ENST00000374255 TRAPPC8Q9Y2L5 1435 aa10.48□□□□□ -0.73
PTBP3-204ENST00000374255 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
PTBP3-204ENST00000374255 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
PTBP3-204ENST00000374255 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
PTBP3-204ENST00000374255 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
PTBP3-204ENST00000374255 GCC2Q8IWJ2 1684 aa10.47□□□□□ -0.73
PTBP3-204ENST00000374255 ABCA8O94911 1581 aa10.47□□□□□ -0.73
PTBP3-204ENST00000374255 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
PTBP3-204ENST00000374255 ABCC10Q5T3U5 1492 aa10.46□□□□□ -0.73
PTBP3-204ENST00000374255 CHD1O14646 1710 aa10.46□□□□□ -0.73
PTBP3-204ENST00000374255 TMEM132EQ6IEE7 984 aa10.46□□□□□ -0.73
PTBP3-204ENST00000374255 TEX14Q8IWB6 1497 aa10.46□□□□□ -0.74
PTBP3-204ENST00000374255 ARID4BQ4LE39 1312 aaPredicted RBP10.44□□□□□ -0.74
PTBP3-204ENST00000374255 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
PTBP3-204ENST00000374255 MBD5Q9P267 1494 aa10.44□□□□□ -0.74
PTBP3-204ENST00000374255 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
PTBP3-204ENST00000374255 NLRP13Q86W25 1043 aa10.43□□□□□ -0.74
PTBP3-204ENST00000374255 PLCH2O75038 1416 aa10.43□□□□□ -0.74
PTBP3-204ENST00000374255 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
PTBP3-204ENST00000374255 FAM69CQ0P6D2 419 aa10.43□□□□□ -0.74
PTBP3-204ENST00000374255 RALBP1Q15311 655 aa10.43□□□□□ -0.74
PTBP3-204ENST00000374255 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 CCDC146Q8IYE0 955 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 ABCC2Q92887 1545 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 ZBED9Q6R2W3 1325 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 FANCAO15360 1455 aa10.42□□□□□ -0.74
PTBP3-204ENST00000374255 NPM2Q86SE8 214 aaKnown RBP10.41□□□□□ -0.74
PTBP3-204ENST00000374255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.41□□□□□ -0.745e-9■□□□□ 10.1
PTBP3-204ENST00000374255 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
PTBP3-204ENST00000374255 ADGRL2O95490 1459 aa10.41□□□□□ -0.74
PTBP3-204ENST00000374255 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
PTBP3-204ENST00000374255 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
PTBP3-204ENST00000374255 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
PTBP3-204ENST00000374255 CANXP27824 592 aaKnown RBP10.4□□□□□ -0.75
PTBP3-204ENST00000374255 BCL11AQ9H165 835 aa10.4□□□□□ -0.75
PTBP3-204ENST00000374255 ASXL2Q76L83 1435 aa10.4□□□□□ -0.75
PTBP3-204ENST00000374255 CDC42BPAQ5VT25 1732 aa10.4□□□□□ -0.75
PTBP3-204ENST00000374255 SAMD9LQ8IVG5 1584 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
PTBP3-204ENST00000374255 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
PTBP3-204ENST00000374255 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 POGKQ9P215 609 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 PLIN1O60240 522 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 ARXQ96QS3 562 aa10.39□□□□□ -0.75
PTBP3-204ENST00000374255 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
PTBP3-204ENST00000374255 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
PTBP3-204ENST00000374255 SHANK2Q9UPX8 1470 aa10.38□□□□□ -0.75
PTBP3-204ENST00000374255 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
PTBP3-204ENST00000374255 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
PTBP3-204ENST00000374255 ADRA2BP18089 450 aa10.37□□□□□ -0.75
PTBP3-204ENST00000374255 ARHGEF12Q9NZN5 1544 aa10.36□□□□□ -0.75
PTBP3-204ENST00000374255 MORC1Q86VD1 984 aa10.36□□□□□ -0.75
PTBP3-204ENST00000374255 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
PTBP3-204ENST00000374255 WDR7Q9Y4E6 1490 aa10.36□□□□□ -0.75
PTBP3-204ENST00000374255 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
PTBP3-204ENST00000374255 RCAN3Q9UKA8 241 aa10.35□□□□□ -0.75
PTBP3-204ENST00000374255 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
PTBP3-204ENST00000374255 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
PTBP3-204ENST00000374255 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
PTBP3-204ENST00000374255 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
PTBP3-204ENST00000374255 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
PTBP3-204ENST00000374255 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
PTBP3-204ENST00000374255 RALGAPBQ86X10 1494 aa10.34□□□□□ -0.75
PTBP3-204ENST00000374255 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
PTBP3-204ENST00000374255 U2SURPO15042 1029 aaKnown RBP10.33□□□□□ -0.76
PTBP3-204ENST00000374255 TESK2Q96S53 571 aa10.33□□□□□ -0.76
PTBP3-204ENST00000374255 ANP32EQ9BTT0 268 aa10.33□□□□□ -0.76
PTBP3-204ENST00000374255 SLC12A5Q9H2X9 1139 aa10.33□□□□□ -0.76
PTBP3-204ENST00000374255 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
PTBP3-204ENST00000374255 NUTM2FA1L443 756 aa10.33□□□□□ -0.76
PTBP3-204ENST00000374255 EIF3AQ14152 1382 aaKnown RBP10.33□□□□□ -0.76
PTBP3-204ENST00000374255 A2MP01023 1474 aa10.32□□□□□ -0.76
PTBP3-204ENST00000374255 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
PTBP3-204ENST00000374255 DUOX2Q9NRD8 1548 aa10.32□□□□□ -0.76
PTBP3-204ENST00000374255 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
PTBP3-204ENST00000374255 CENPJQ9HC77 1338 aaPredicted RBP10.32□□□□□ -0.76
PTBP3-204ENST00000374255 APAF1O14727 1248 aa10.31□□□□□ -0.76
PTBP3-204ENST00000374255 SOX12O15370 315 aa10.31□□□□□ -0.76
PTBP3-204ENST00000374255 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
PTBP3-204ENST00000374255 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
PTBP3-204ENST00000374255 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
PTBP3-204ENST00000374255 FRAT1Q92837 279 aaPredicted RBP10.31□□□□□ -0.76
PTBP3-204ENST00000374255 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms