RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
TFAM-201ENST00000373895 NPATQ14207 1427 aa19.48■□□□□ 0.71
TFAM-201ENST00000373895 CCDC141Q6ZP82 1450 aa19.48■□□□□ 0.71
TFAM-201ENST00000373895 DHX29Q7Z478 1369 aaKnown RBP19.46■□□□□ 0.71
TFAM-201ENST00000373895 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
TFAM-201ENST00000373895 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
TFAM-201ENST00000373895 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
TFAM-201ENST00000373895 KIF3BO15066 747 aa19.44■□□□□ 0.7
TFAM-201ENST00000373895 PTPRTO14522 1441 aa19.43■□□□□ 0.7
TFAM-201ENST00000373895 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
TFAM-201ENST00000373895 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
TFAM-201ENST00000373895 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
TFAM-201ENST00000373895 MYO3AQ8NEV4 1616 aa19.41■□□□□ 0.7
TFAM-201ENST00000373895 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
TFAM-201ENST00000373895 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
TFAM-201ENST00000373895 MAP3K1Q13233 1512 aa19.4■□□□□ 0.7
TFAM-201ENST00000373895 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
TFAM-201ENST00000373895 ZNF142P52746 1687 aaPredicted RBP19.38■□□□□ 0.69
TFAM-201ENST00000373895 CEP170BQ9Y4F5 1589 aaPredicted RBP19.37■□□□□ 0.69
TFAM-201ENST00000373895 MYOM3Q5VTT5 1437 aa19.35■□□□□ 0.69
TFAM-201ENST00000373895 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
TFAM-201ENST00000373895 WASHC2CQ9Y4E1 1318 aa19.34■□□□□ 0.69
TFAM-201ENST00000373895 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
TFAM-201ENST00000373895 MIA2Q96PC5 1412 aa19.33■□□□□ 0.68
TFAM-201ENST00000373895 LTBP4Q8N2S1 1624 aa19.33■□□□□ 0.68
TFAM-201ENST00000373895 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
TFAM-201ENST00000373895 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
TFAM-201ENST00000373895 APLP2Q06481 763 aa19.31■□□□□ 0.68
TFAM-201ENST00000373895 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
TFAM-201ENST00000373895 DNMT1P26358 1616 aaKnown RBP19.3■□□□□ 0.68
TFAM-201ENST00000373895 PKD2Q13563 968 aa19.3■□□□□ 0.68
TFAM-201ENST00000373895 TNRQ92752 1358 aa19.3■□□□□ 0.68
TFAM-201ENST00000373895 PZPP20742 1482 aa19.29■□□□□ 0.68
TFAM-201ENST00000373895 FAM135AQ9P2D6 1515 aa19.29■□□□□ 0.68
TFAM-201ENST00000373895 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
TFAM-201ENST00000373895 ZNF335Q9H4Z2 1342 aaPredicted RBP19.26■□□□□ 0.67
TFAM-201ENST00000373895 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
TFAM-201ENST00000373895 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
TFAM-201ENST00000373895 EIF2AK4Q9P2K8 1649 aaKnown RBP19.24■□□□□ 0.67
TFAM-201ENST00000373895 ABCC3O15438 1527 aa19.23■□□□□ 0.67
TFAM-201ENST00000373895 KCNA4P22459 653 aa19.22■□□□□ 0.67
TFAM-201ENST00000373895 ABCC5O15440 1437 aa19.22■□□□□ 0.67
TFAM-201ENST00000373895 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
TFAM-201ENST00000373895 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
TFAM-201ENST00000373895 CEP152O94986 1710 aa19.21■□□□□ 0.67
TFAM-201ENST00000373895 POLR1AO95602 1720 aaPredicted RBP19.21■□□□□ 0.67
TFAM-201ENST00000373895 CFAP65Q6ZU64 1925 aaKnown RBP19.21■□□□□ 0.67
TFAM-201ENST00000373895 ZC3H13Q5T200 1668 aaKnown RBP19.2■□□□□ 0.66
TFAM-201ENST00000373895 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
TFAM-201ENST00000373895 RRP7BPQ9NSQ0 103 aa19.2■□□□□ 0.66
TFAM-201ENST00000373895 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
TFAM-201ENST00000373895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
TFAM-201ENST00000373895 NLRP1Q9C000 1473 aa19.19■□□□□ 0.66
TFAM-201ENST00000373895 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
TFAM-201ENST00000373895 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
TFAM-201ENST00000373895 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
TFAM-201ENST00000373895 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
TFAM-201ENST00000373895 UGGT1Q9NYU2 1555 aa19.18■□□□□ 0.66
TFAM-201ENST00000373895 DAPK1P53355 1430 aa19.17■□□□□ 0.66
TFAM-201ENST00000373895 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
TFAM-201ENST00000373895 ANKLE2Q86XL3 938 aa19.16■□□□□ 0.66
TFAM-201ENST00000373895 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
TFAM-201ENST00000373895 SPATA31D1Q6ZQQ2 1576 aa19.15■□□□□ 0.66
TFAM-201ENST00000373895 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
TFAM-201ENST00000373895 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
TFAM-201ENST00000373895 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
TFAM-201ENST00000373895 PRDM15P57071 1507 aaPredicted RBP19.11■□□□□ 0.65
TFAM-201ENST00000373895 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
TFAM-201ENST00000373895 DEPDC5O75140 1603 aa19.09■□□□□ 0.65
TFAM-201ENST00000373895 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
TFAM-201ENST00000373895 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.64
TFAM-201ENST00000373895 MED14O60244 1454 aa19.08■□□□□ 0.64
TFAM-201ENST00000373895 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
TFAM-201ENST00000373895 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
TFAM-201ENST00000373895 ARHGAP31Q2M1Z3 1444 aa19.06■□□□□ 0.64
TFAM-201ENST00000373895 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
TFAM-201ENST00000373895 KANK1Q14678 1352 aa19.06■□□□□ 0.64
TFAM-201ENST00000373895 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
TFAM-201ENST00000373895 CPS1P31327 1500 aa19.05■□□□□ 0.64
TFAM-201ENST00000373895 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
TFAM-201ENST00000373895 ADGRL2O95490 1459 aa19.01■□□□□ 0.63
TFAM-201ENST00000373895 PIK3C2BO00750 1634 aa19■□□□□ 0.63
TFAM-201ENST00000373895 LTKP29376 864 aa19■□□□□ 0.63
TFAM-201ENST00000373895 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
TFAM-201ENST00000373895 PIP4K2BP78356 416 aa18.99■□□□□ 0.63
TFAM-201ENST00000373895 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
TFAM-201ENST00000373895 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
TFAM-201ENST00000373895 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
TFAM-201ENST00000373895 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
TFAM-201ENST00000373895 SLIT1O75093 1534 aa18.97■□□□□ 0.63
TFAM-201ENST00000373895 TOM1O60784 492 aa18.97■□□□□ 0.63
TFAM-201ENST00000373895 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
TFAM-201ENST00000373895 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
TFAM-201ENST00000373895 IDI1Q13907 227 aa18.96■□□□□ 0.63
TFAM-201ENST00000373895 ANKRD50Q9ULJ7 1429 aa18.95■□□□□ 0.62
TFAM-201ENST00000373895 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
TFAM-201ENST00000373895 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
TFAM-201ENST00000373895 SYNMO15061 1565 aa18.94■□□□□ 0.62
TFAM-201ENST00000373895 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
TFAM-201ENST00000373895 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms