RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 ZNF592Q92610 1267 aa11.21□□□□□ -0.62
PTPRT-206ENST00000373198 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
PTPRT-206ENST00000373198 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
PTPRT-206ENST00000373198 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
PTPRT-206ENST00000373198 NAP1L1P55209 391 aaKnown RBP11.2□□□□□ -0.62
PTPRT-206ENST00000373198 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
PTPRT-206ENST00000373198 EVA1CP58658 441 aa11.19□□□□□ -0.62
PTPRT-206ENST00000373198 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
PTPRT-206ENST00000373198 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPRT-206ENST00000373198 GGT6Q6P531 493 aa11.19□□□□□ -0.62
PTPRT-206ENST00000373198 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
PTPRT-206ENST00000373198 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 ZFYVE27Q5T4F4 411 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 GOLGA6L19H0YKK7 550 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
PTPRT-206ENST00000373198 CLIP1P30622 1438 aa11.17□□□□□ -0.62
PTPRT-206ENST00000373198 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
PTPRT-206ENST00000373198 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
PTPRT-206ENST00000373198 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
PTPRT-206ENST00000373198 RILPL2Q969X0 211 aa11.16□□□□□ -0.62
PTPRT-206ENST00000373198 FOSBP53539 338 aa11.16□□□□□ -0.62
PTPRT-206ENST00000373198 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
PTPRT-206ENST00000373198 HMMRO75330 724 aa11.16□□□□□ -0.62
PTPRT-206ENST00000373198 APPP05067 770 aa11.16□□□□□ -0.62
PTPRT-206ENST00000373198 SYNE3Q6ZMZ3 975 aa11.16□□□□□ -0.62
PTPRT-206ENST00000373198 AEBP2Q6ZN18 517 aaPredicted RBP11.15□□□□□ -0.62
PTPRT-206ENST00000373198 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
PTPRT-206ENST00000373198 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
PTPRT-206ENST00000373198 BECN2A8MW95 431 aa11.14□□□□□ -0.63
PTPRT-206ENST00000373198 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
PTPRT-206ENST00000373198 EPS15P42566 896 aa11.14□□□□□ -0.63
PTPRT-206ENST00000373198 AMPHP49418 695 aa11.14□□□□□ -0.63
PTPRT-206ENST00000373198 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
PTPRT-206ENST00000373198 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
PTPRT-206ENST00000373198 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
PTPRT-206ENST00000373198 GPS2Q13227 327 aa11.13□□□□□ -0.63
PTPRT-206ENST00000373198 ST18O60284 1047 aa11.13□□□□□ -0.63
PTPRT-206ENST00000373198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPRT-206ENST00000373198 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
PTPRT-206ENST00000373198 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
PTPRT-206ENST00000373198 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
PTPRT-206ENST00000373198 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
PTPRT-206ENST00000373198 FYB1O15117 783 aa11.12□□□□□ -0.63
PTPRT-206ENST00000373198 RUFY1Q96T51 708 aa11.12□□□□□ -0.63
PTPRT-206ENST00000373198 MAP7D2Q96T17 732 aa11.12□□□□□ -0.63
PTPRT-206ENST00000373198 TRIM29Q14134 588 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 SKIDA1Q1XH10 827 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 ANKRD20A12PQ8NF67 263 aa11.11□□□□□ -0.63
PTPRT-206ENST00000373198 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
PTPRT-206ENST00000373198 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
PTPRT-206ENST00000373198 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
PTPRT-206ENST00000373198 HDAC5Q9UQL6 1122 aa11.1□□□□□ -0.63
PTPRT-206ENST00000373198 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
PTPRT-206ENST00000373198 TCERG1O14776 1098 aaKnown RBP11.09□□□□□ -0.63
PTPRT-206ENST00000373198 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
PTPRT-206ENST00000373198 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
PTPRT-206ENST00000373198 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
PTPRT-206ENST00000373198 PPM1FP49593 454 aaPredicted RBP11.09□□□□□ -0.63
PTPRT-206ENST00000373198 AK7Q96M32 723 aa11.09□□□□□ -0.63
PTPRT-206ENST00000373198 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
PTPRT-206ENST00000373198 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
PTPRT-206ENST00000373198 EID1Q9Y6B2 187 aa11.08□□□□□ -0.63
PTPRT-206ENST00000373198 CCNB3Q8WWL7 1395 aa11.08□□□□□ -0.64
PTPRT-206ENST00000373198 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.64
PTPRT-206ENST00000373198 PLCD4Q9BRC7 762 aa11.08□□□□□ -0.64
PTPRT-206ENST00000373198 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
PTPRT-206ENST00000373198 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
PTPRT-206ENST00000373198 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
PTPRT-206ENST00000373198 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
PTPRT-206ENST00000373198 KDM4AO75164 1064 aa11.07□□□□□ -0.64
PTPRT-206ENST00000373198 IKQ13123 557 aaPredicted RBP11.07□□□□□ -0.64
PTPRT-206ENST00000373198 PMFBP1Q8TBY8 1022 aa11.07□□□□□ -0.64
PTPRT-206ENST00000373198 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
PTPRT-206ENST00000373198 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
PTPRT-206ENST00000373198 CPLX1O14810 134 aa11.06□□□□□ -0.64
PTPRT-206ENST00000373198 TEX35Q5T0J7 233 aa11.06□□□□□ -0.64
PTPRT-206ENST00000373198 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
PTPRT-206ENST00000373198 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
PTPRT-206ENST00000373198 FOXD1Q16676 465 aa11.05□□□□□ -0.64
PTPRT-206ENST00000373198 IBSPP21815 317 aaPredicted RBP11.05□□□□□ -0.64
PTPRT-206ENST00000373198 DIAPH3Q9NSV4 1193 aa11.05□□□□□ -0.64
PTPRT-206ENST00000373198 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
PTPRT-206ENST00000373198 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
PTPRT-206ENST00000373198 OFD1O75665 1012 aa11.04□□□□□ -0.64
PTPRT-206ENST00000373198 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
PTPRT-206ENST00000373198 EIF2S2P20042 333 aaKnown RBP11.03□□□□□ -0.64
PTPRT-206ENST00000373198 DHX37Q8IY37 1157 aaKnown RBP11.03□□□□□ -0.64
PTPRT-206ENST00000373198 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
PTPRT-206ENST00000373198 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
PTPRT-206ENST00000373198 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
PTPRT-206ENST00000373198 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
PTPRT-206ENST00000373198 ERICH2A1L162 156 aa11.03□□□□□ -0.64
PTPRT-206ENST00000373198 CDR1P51861 262 aa11.03□□□□□ -0.64
PTPRT-206ENST00000373198 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms