RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 FKBP8Q14318 412 aa25.89■■□□□ 1.73
USP49-202ENST00000373010 CCDC144AA2RUR9 1427 aa25.89■■□□□ 1.73
USP49-202ENST00000373010 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.73
USP49-202ENST00000373010 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
USP49-202ENST00000373010 BCANQ96GW7 911 aa25.84■■□□□ 1.73
USP49-202ENST00000373010 ERBINQ96RT1 1412 aa25.84■■□□□ 1.73
USP49-202ENST00000373010 RGL3Q3MIN7 710 aa25.83■■□□□ 1.73
USP49-202ENST00000373010 MRS2Q9HD23 443 aa25.83■■□□□ 1.73
USP49-202ENST00000373010 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
USP49-202ENST00000373010 MAGI2Q86UL8 1455 aa25.81■■□□□ 1.72
USP49-202ENST00000373010 ST20-MTHFSA0A0A6YYL1 179 aa25.8■■□□□ 1.72
USP49-202ENST00000373010 FAM9BQ8IZU0 186 aa25.8■■□□□ 1.72
USP49-202ENST00000373010 ARID4BQ4LE39 1312 aaPredicted RBP25.79■■□□□ 1.72
USP49-202ENST00000373010 ROCK2O75116 1388 aaKnown RBP25.79■■□□□ 1.72
USP49-202ENST00000373010 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
USP49-202ENST00000373010 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
USP49-202ENST00000373010 WDR7Q9Y4E6 1490 aa25.79■■□□□ 1.72
USP49-202ENST00000373010 PRAG1Q86YV5 1406 aa25.78■■□□□ 1.72
USP49-202ENST00000373010 NEFLP07196 543 aa25.78■■□□□ 1.72
USP49-202ENST00000373010 ARAP3Q8WWN8 1544 aa25.77■■□□□ 1.72
USP49-202ENST00000373010 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
USP49-202ENST00000373010 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
USP49-202ENST00000373010 A2MP01023 1474 aa25.76■■□□□ 1.72
USP49-202ENST00000373010 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
USP49-202ENST00000373010 NBPF1Q3BBV0 1214 aa25.72■■□□□ 1.71
USP49-202ENST00000373010 ATP10AO60312 1499 aa25.71■■□□□ 1.71
USP49-202ENST00000373010 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.71
USP49-202ENST00000373010 ABCA9Q8IUA7 1624 aa25.7■■□□□ 1.7
USP49-202ENST00000373010 FANCAO15360 1455 aa25.7■■□□□ 1.7
USP49-202ENST00000373010 E9PCH4 1651 aa25.66■■□□□ 1.7
USP49-202ENST00000373010 ASXL2Q76L83 1435 aa25.65■■□□□ 1.7
USP49-202ENST00000373010 ATP7AQ04656 1500 aa25.64■■□□□ 1.69
USP49-202ENST00000373010 GPRASP1Q5JY77 1395 aa25.63■■□□□ 1.69
USP49-202ENST00000373010 INO80Q9ULG1 1556 aaPredicted RBP25.63■■□□□ 1.69
USP49-202ENST00000373010 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
USP49-202ENST00000373010 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
USP49-202ENST00000373010 ZBED9Q6R2W3 1325 aa25.6■■□□□ 1.69
USP49-202ENST00000373010 DEPDC5O75140 1603 aa25.6■■□□□ 1.69
USP49-202ENST00000373010 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
USP49-202ENST00000373010 LAMC1P11047 1609 aa25.59■■□□□ 1.69
USP49-202ENST00000373010 EIF2AK4Q9P2K8 1649 aaKnown RBP25.59■■□□□ 1.69
USP49-202ENST00000373010 PRDM15P57071 1507 aaPredicted RBP25.59■■□□□ 1.69
USP49-202ENST00000373010 TSHZ2Q9NRE2 1034 aa25.56■■□□□ 1.68
USP49-202ENST00000373010 SPHKAPQ2M3C7 1700 aa25.56■■□□□ 1.68
USP49-202ENST00000373010 IRX6P78412 446 aaPredicted RBP25.55■■□□□ 1.68
USP49-202ENST00000373010 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
USP49-202ENST00000373010 TRPM2O94759 1503 aa25.55■■□□□ 1.68
USP49-202ENST00000373010 KIF3BO15066 747 aa25.54■■□□□ 1.68
USP49-202ENST00000373010 TET3O43151 1660 aa25.53■■□□□ 1.68
USP49-202ENST00000373010 TESK2Q96S53 571 aa25.52■■□□□ 1.68
USP49-202ENST00000373010 CLTCL1P53675 1640 aa25.52■■□□□ 1.68
USP49-202ENST00000373010 PTPRTO14522 1441 aa25.52■■□□□ 1.68
USP49-202ENST00000373010 CEP152O94986 1710 aa25.51■■□□□ 1.67
USP49-202ENST00000373010 DISP3Q9P2K9 1392 aa25.51■■□□□ 1.67
USP49-202ENST00000373010 COL17A1Q9UMD9 1497 aaPredicted RBP25.51■■□□□ 1.67
USP49-202ENST00000373010 VWDEQ8N2E2 1590 aa25.5■■□□□ 1.67
USP49-202ENST00000373010 KANK1Q14678 1352 aa25.5■■□□□ 1.67
USP49-202ENST00000373010 RNF17Q9BXT8 1623 aaKnown RBP25.5■■□□□ 1.67
USP49-202ENST00000373010 MADDQ8WXG6 1647 aa25.49■■□□□ 1.67
USP49-202ENST00000373010 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
USP49-202ENST00000373010 TMC1Q8TDI8 760 aa25.49■■□□□ 1.67
USP49-202ENST00000373010 PNISRQ8TF01 805 aaKnown RBP25.48■■□□□ 1.67
USP49-202ENST00000373010 MROH1Q8NDA8 1641 aa25.47■■□□□ 1.67
USP49-202ENST00000373010 KIDINS220Q9ULH0 1771 aa25.47■■□□□ 1.67
USP49-202ENST00000373010 RALBP1Q15311 655 aa25.46■■□□□ 1.67
USP49-202ENST00000373010 MYBBP1AQ9BQG0 1328 aaKnown RBP25.45■■□□□ 1.67
USP49-202ENST00000373010 KTN1Q86UP2 1357 aaKnown RBP25.43■■□□□ 1.66
USP49-202ENST00000373010 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
USP49-202ENST00000373010 PER1O15534 1290 aaPredicted RBP25.41■■□□□ 1.66
USP49-202ENST00000373010 BRD4O60885 1362 aaPredicted RBP25.41■■□□□ 1.66
USP49-202ENST00000373010 TMF1P82094 1093 aa25.41■■□□□ 1.66
USP49-202ENST00000373010 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
USP49-202ENST00000373010 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
USP49-202ENST00000373010 IQGAP1P46940 1657 aa25.39■■□□□ 1.66
USP49-202ENST00000373010 UGGT1Q9NYU2 1555 aa25.38■■□□□ 1.65
USP49-202ENST00000373010 PARD3Q8TEW0 1356 aa25.38■■□□□ 1.65
USP49-202ENST00000373010 PANK3Q9H999 370 aa25.37■■□□□ 1.65
USP49-202ENST00000373010 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
USP49-202ENST00000373010 SMG6Q86US8 1419 aaKnown RBP25.35■■□□□ 1.65
USP49-202ENST00000373010 EFCAB6Q5THR3 1501 aa25.35■■□□□ 1.65
USP49-202ENST00000373010 PPRC1Q5VV67 1664 aaKnown RBP25.34■■□□□ 1.65
USP49-202ENST00000373010 CC2D1BQ5T0F9 858 aaKnown RBP25.33■■□□□ 1.65
USP49-202ENST00000373010 STAC3Q96MF2 364 aa25.33■■□□□ 1.65
USP49-202ENST00000373010 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
USP49-202ENST00000373010 POGZQ7Z3K3 1410 aa25.32■■□□□ 1.64
USP49-202ENST00000373010 NLRP13Q86W25 1043 aa25.32■■□□□ 1.64
USP49-202ENST00000373010 SCAF11Q99590 1463 aaKnown RBP25.31■■□□□ 1.64
USP49-202ENST00000373010 ERICH6BQ5W0A0 696 aa25.3■■□□□ 1.64
USP49-202ENST00000373010 NUDCQ9Y266 331 aa25.3■■□□□ 1.64
USP49-202ENST00000373010 KIF1BO60333 1816 aa25.3■■□□□ 1.64
USP49-202ENST00000373010 NEURL4Q96JN8 1562 aa25.28■■□□□ 1.64
USP49-202ENST00000373010 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
USP49-202ENST00000373010 FRMPD1Q5SYB0 1578 aa25.27■■□□□ 1.64
USP49-202ENST00000373010 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
USP49-202ENST00000373010 MROH2AA6NES4 1674 aa25.27■■□□□ 1.64
USP49-202ENST00000373010 PPP4R2Q9NY27 417 aa25.26■■□□□ 1.63
USP49-202ENST00000373010 HECW2Q9P2P5 1572 aa25.26■■□□□ 1.63
USP49-202ENST00000373010 KIAA1210Q9ULL0 1709 aa25.26■■□□□ 1.63
USP49-202ENST00000373010 MLH3Q9UHC1 1453 aa25.26■■□□□ 1.63
USP49-202ENST00000373010 MAP3K4Q9Y6R4 1608 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms