RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CCDC144AA2RUR9 1427 aa35.26■■■■□ 3.23
CTSA-203ENST00000372459 DEPDC5O75140 1603 aa35.25■■■■□ 3.23
CTSA-203ENST00000372459 KIDINS220Q9ULH0 1771 aa35.22■■■■□ 3.23
CTSA-203ENST00000372459 EIF2AK4Q9P2K8 1649 aaKnown RBP35.22■■■■□ 3.23
CTSA-203ENST00000372459 DHX29Q7Z478 1369 aaKnown RBP35.22■■■■□ 3.23
CTSA-203ENST00000372459 NEO1Q92859 1461 aa35.22■■■■□ 3.23
CTSA-203ENST00000372459 POGZQ7Z3K3 1410 aa35.22■■■■□ 3.23
CTSA-203ENST00000372459 PLA2R1Q13018 1463 aa35.21■■■■□ 3.23
CTSA-203ENST00000372459 ATP10AO60312 1499 aa35.2■■■■□ 3.23
CTSA-203ENST00000372459 UHRF1BP1Q6BDS2 1440 aa35.2■■■■□ 3.23
CTSA-203ENST00000372459 KDM5CP41229 1560 aa35.2■■■■□ 3.23
CTSA-203ENST00000372459 MAP3K4Q9Y6R4 1608 aa35.15■■■■□ 3.22
CTSA-203ENST00000372459 GLI2P10070 1586 aa35.15■■■■□ 3.22
CTSA-203ENST00000372459 KANK1Q14678 1352 aa35.14■■■■□ 3.22
CTSA-203ENST00000372459 MLH3Q9UHC1 1453 aa35.13■■■■□ 3.21
CTSA-203ENST00000372459 KIF3BO15066 747 aa35.12■■■■□ 3.21
CTSA-203ENST00000372459 ZNF326Q5BKZ1 582 aaKnown RBP35.11■■■■□ 3.21
CTSA-203ENST00000372459 VWDEQ8N2E2 1590 aa35.11■■■■□ 3.21
CTSA-203ENST00000372459 HECW2Q9P2P5 1572 aa35.1■■■■□ 3.21
CTSA-203ENST00000372459 E9PCH4 1651 aa35.1■■■■□ 3.21
CTSA-203ENST00000372459 SPATA31E1Q6ZUB1 1445 aa35.09■■■■□ 3.21
CTSA-203ENST00000372459 PRDM15P57071 1507 aaPredicted RBP35.09■■■■□ 3.21
CTSA-203ENST00000372459 TET3O43151 1660 aa35.09■■■■□ 3.21
CTSA-203ENST00000372459 DCAF11Q8TEB1 546 aa35.08■■■■□ 3.21
CTSA-203ENST00000372459 A2MP01023 1474 aa35.08■■■■□ 3.21
CTSA-203ENST00000372459 RALGAPBQ86X10 1494 aa35.08■■■■□ 3.21
CTSA-203ENST00000372459 YTHDC1Q96MU7 727 aaKnown RBP35.07■■■■□ 3.21
CTSA-203ENST00000372459 WASHC2AQ641Q2 1341 aa35.04■■■■□ 3.2
CTSA-203ENST00000372459 MROH1Q8NDA8 1641 aa35.04■■■■□ 3.2
CTSA-203ENST00000372459 KDM2AQ9Y2K7 1162 aa35.04■■■■□ 3.2
CTSA-203ENST00000372459 TRPM2O94759 1503 aa35■■■■□ 3.19
CTSA-203ENST00000372459 DIP2BQ9P265 1576 aa34.98■■■■□ 3.19
CTSA-203ENST00000372459 SPHKAPQ2M3C7 1700 aa34.98■■■■□ 3.19
CTSA-203ENST00000372459 PTPRTO14522 1441 aa34.98■■■■□ 3.19
CTSA-203ENST00000372459 USP47Q96K76 1375 aa34.97■■■■□ 3.19
CTSA-203ENST00000372459 RGL3Q3MIN7 710 aa34.97■■■■□ 3.19
CTSA-203ENST00000372459 RNF17Q9BXT8 1623 aaKnown RBP34.97■■■■□ 3.19
CTSA-203ENST00000372459 PELP1Q8IZL8 1130 aaKnown RBP34.96■■■■□ 3.19
CTSA-203ENST00000372459 FRMPD1Q5SYB0 1578 aa34.95■■■■□ 3.19
CTSA-203ENST00000372459 ANP32CO43423 234 aa34.95■■■■□ 3.19
CTSA-203ENST00000372459 ABCA6Q8N139 1617 aa34.95■■■■□ 3.19
CTSA-203ENST00000372459 RAPGEF3O95398 923 aa34.94■■■■□ 3.18
CTSA-203ENST00000372459 FAM69CQ0P6D2 419 aa34.94■■■■□ 3.18
CTSA-203ENST00000372459 RICTORQ6R327 1708 aa34.94■■■■□ 3.18
CTSA-203ENST00000372459 CCDC7Q96M83 1385 aa34.94■■■■□ 3.18
CTSA-203ENST00000372459 PRAG1Q86YV5 1406 aa34.93■■■■□ 3.18
CTSA-203ENST00000372459 POLR1AO95602 1720 aaPredicted RBP34.93■■■■□ 3.18
CTSA-203ENST00000372459 CARD11Q9BXL7 1154 aa34.91■■■■□ 3.18
CTSA-203ENST00000372459 BCORL1Q5H9F3 1711 aa34.91■■■■□ 3.18
CTSA-203ENST00000372459 LMTK2Q8IWU2 1503 aa34.9■■■■□ 3.18
CTSA-203ENST00000372459 C11orf95C9JLR9 678 aaPredicted RBP34.89■■■■□ 3.18
CTSA-203ENST00000372459 EFCAB6Q5THR3 1501 aa34.88■■■■□ 3.17
CTSA-203ENST00000372459 TRPM1Q7Z4N2 1603 aa34.87■■■■□ 3.17
CTSA-203ENST00000372459 CEP152O94986 1710 aa34.87■■■■□ 3.17
CTSA-203ENST00000372459 GTF3C3Q9Y5Q9 886 aa34.86■■■■□ 3.17
CTSA-203ENST00000372459 ROCK2O75116 1388 aaKnown RBP34.86■■■■□ 3.17
CTSA-203ENST00000372459 CLTCL1P53675 1640 aa34.85■■■■□ 3.17
CTSA-203ENST00000372459 DIP2CQ9Y2E4 1556 aa34.85■■■■□ 3.17
CTSA-203ENST00000372459 CNTLNQ9NXG0 1405 aa34.84■■■■□ 3.17
CTSA-203ENST00000372459 KIF7Q2M1P5 1343 aa34.82■■■■□ 3.17
CTSA-203ENST00000372459 PPRC1Q5VV67 1664 aaKnown RBP34.82■■■■□ 3.16
CTSA-203ENST00000372459 CCER2I3L3R5 266 aa34.81■■■■□ 3.16
CTSA-203ENST00000372459 GGT6Q6P531 493 aa34.77■■■■□ 3.16
CTSA-203ENST00000372459 NEURL4Q96JN8 1562 aa34.76■■■■□ 3.16
CTSA-203ENST00000372459 ARID4BQ4LE39 1312 aaPredicted RBP34.76■■■■□ 3.15
CTSA-203ENST00000372459 GPRASP1Q5JY77 1395 aa34.76■■■■□ 3.15
CTSA-203ENST00000372459 STAC3Q96MF2 364 aa34.75■■■■□ 3.15
CTSA-203ENST00000372459 TSPOAP1O95153 1857 aa34.75■■■■□ 3.15
CTSA-203ENST00000372459 LAMC1P11047 1609 aa34.75■■■■□ 3.15
CTSA-203ENST00000372459 ZMYM4Q5VZL5 1548 aa34.74■■■■□ 3.15
CTSA-203ENST00000372459 YEATS2Q9ULM3 1422 aa34.71■■■■□ 3.15
CTSA-203ENST00000372459 ABCC3O15438 1527 aa34.69■■■■□ 3.14
CTSA-203ENST00000372459 ST20-MTHFSA0A0A6YYL1 179 aa34.69■■■■□ 3.14
CTSA-203ENST00000372459 WASHC2CQ9Y4E1 1318 aa34.68■■■■□ 3.14
CTSA-203ENST00000372459 NBPF1Q3BBV0 1214 aa34.67■■■■□ 3.14
CTSA-203ENST00000372459 MADDQ8WXG6 1647 aa34.66■■■■□ 3.14
CTSA-203ENST00000372459 NPATQ14207 1427 aa34.66■■■■□ 3.14
CTSA-203ENST00000372459 KIF1BO60333 1816 aa34.66■■■■□ 3.14
CTSA-203ENST00000372459 UGGT1Q9NYU2 1555 aa34.64■■■■□ 3.14
CTSA-203ENST00000372459 CAMSAP1Q5T5Y3 1602 aa34.62■■■■□ 3.13
CTSA-203ENST00000372459 KIF13AQ9H1H9 1805 aa34.61■■■■□ 3.13
CTSA-203ENST00000372459 ZC3H13Q5T200 1668 aaKnown RBP34.59■■■■□ 3.13
CTSA-203ENST00000372459 POLR3GLQ9BT43 218 aa34.55■■■■□ 3.12
CTSA-203ENST00000372459 MYOM2P54296 1465 aa34.53■■■■□ 3.12
CTSA-203ENST00000372459 ARHGAP31Q2M1Z3 1444 aa34.52■■■■□ 3.12
CTSA-203ENST00000372459 ADGRB3O60242 1522 aa34.52■■■■□ 3.12
CTSA-203ENST00000372459 MROH2AA6NES4 1674 aa34.51■■■■□ 3.12
CTSA-203ENST00000372459 CFAP65Q6ZU64 1925 aaKnown RBP34.51■■■■□ 3.12
CTSA-203ENST00000372459 REREQ9P2R6 1566 aa34.51■■■■□ 3.11
CTSA-203ENST00000372459 NOS1P29475 1434 aa34.5■■■■□ 3.11
CTSA-203ENST00000372459 PRKRIP1Q9H875 184 aaPredicted RBP34.49■■■■□ 3.11
CTSA-203ENST00000372459 IFT172Q9UG01 1749 aa34.49■■■■□ 3.11
CTSA-203ENST00000372459 KIAA1210Q9ULL0 1709 aa34.49■■■■□ 3.11
CTSA-203ENST00000372459 SIGLEC1Q9BZZ2 1709 aa34.46■■■■□ 3.11
CTSA-203ENST00000372459 IQGAP1P46940 1657 aa34.44■■■■□ 3.1
CTSA-203ENST00000372459 AGLP35573 1532 aa34.43■■■■□ 3.1
CTSA-203ENST00000372459 CHGAP10645 457 aaKnown RBP34.42■■■■□ 3.1
CTSA-203ENST00000372459 TESK2Q96S53 571 aa34.42■■■■□ 3.1
CTSA-203ENST00000372459 COL17A1Q9UMD9 1497 aaPredicted RBP34.41■■■■□ 3.1
CTSA-203ENST00000372459 PIK3C2BO00750 1634 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms