RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ADGRL2O95490 1459 aa16.43■□□□□ 0.22
TSPAN1-201ENST00000372003 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
TSPAN1-201ENST00000372003 DUOX2Q9NRD8 1548 aa16.39■□□□□ 0.21
TSPAN1-201ENST00000372003 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
TSPAN1-201ENST00000372003 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
TSPAN1-201ENST00000372003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.21
TSPAN1-201ENST00000372003 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
TSPAN1-201ENST00000372003 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
TSPAN1-201ENST00000372003 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
TSPAN1-201ENST00000372003 AGLP35573 1532 aa16.37■□□□□ 0.21
TSPAN1-201ENST00000372003 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
TSPAN1-201ENST00000372003 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
TSPAN1-201ENST00000372003 NAIPQ13075 1403 aa16.35■□□□□ 0.21
TSPAN1-201ENST00000372003 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
TSPAN1-201ENST00000372003 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
TSPAN1-201ENST00000372003 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
TSPAN1-201ENST00000372003 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
TSPAN1-201ENST00000372003 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
TSPAN1-201ENST00000372003 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
TSPAN1-201ENST00000372003 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
TSPAN1-201ENST00000372003 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
TSPAN1-201ENST00000372003 KANK1Q14678 1352 aa16.28■□□□□ 0.2
TSPAN1-201ENST00000372003 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.2
TSPAN1-201ENST00000372003 NUP155O75694 1391 aa16.27■□□□□ 0.19
TSPAN1-201ENST00000372003 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
TSPAN1-201ENST00000372003 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
TSPAN1-201ENST00000372003 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
TSPAN1-201ENST00000372003 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
TSPAN1-201ENST00000372003 ZMYM3Q14202 1370 aa16.24■□□□□ 0.19
TSPAN1-201ENST00000372003 GCC2Q8IWJ2 1684 aa16.23■□□□□ 0.19
TSPAN1-201ENST00000372003 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
TSPAN1-201ENST00000372003 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
TSPAN1-201ENST00000372003 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
TSPAN1-201ENST00000372003 PTPRMP28827 1452 aa16.21■□□□□ 0.19
TSPAN1-201ENST00000372003 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
TSPAN1-201ENST00000372003 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
TSPAN1-201ENST00000372003 FBXO31Q5XUX0 539 aaPredicted RBP16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 ABCC3O15438 1527 aa16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
TSPAN1-201ENST00000372003 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
TSPAN1-201ENST00000372003 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
TSPAN1-201ENST00000372003 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
TSPAN1-201ENST00000372003 UNC13BO14795 1591 aa16.17■□□□□ 0.18
TSPAN1-201ENST00000372003 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
TSPAN1-201ENST00000372003 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
TSPAN1-201ENST00000372003 PKD2Q13563 968 aa16.15■□□□□ 0.18
TSPAN1-201ENST00000372003 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
TSPAN1-201ENST00000372003 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
TSPAN1-201ENST00000372003 FOXD1Q16676 465 aa16.14■□□□□ 0.17
TSPAN1-201ENST00000372003 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
TSPAN1-201ENST00000372003 CEP152O94986 1710 aa16.13■□□□□ 0.17
TSPAN1-201ENST00000372003 NPATQ14207 1427 aa16.13■□□□□ 0.17
TSPAN1-201ENST00000372003 PZPP20742 1482 aa16.11■□□□□ 0.17
TSPAN1-201ENST00000372003 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
TSPAN1-201ENST00000372003 IQGAP3Q86VI3 1631 aa16.1■□□□□ 0.17
TSPAN1-201ENST00000372003 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
TSPAN1-201ENST00000372003 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
TSPAN1-201ENST00000372003 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
TSPAN1-201ENST00000372003 C3P01024 1663 aa16.1■□□□□ 0.17
TSPAN1-201ENST00000372003 MROH2AA6NES4 1674 aa16.09■□□□□ 0.17
TSPAN1-201ENST00000372003 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.17
TSPAN1-201ENST00000372003 TNRQ92752 1358 aa16.08■□□□□ 0.16
TSPAN1-201ENST00000372003 TET3O43151 1660 aa16.07■□□□□ 0.16
TSPAN1-201ENST00000372003 ERVK-7P63135 1459 aa16.06■□□□□ 0.16
TSPAN1-201ENST00000372003 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
TSPAN1-201ENST00000372003 CCER2I3L3R5 266 aa16.05■□□□□ 0.16
TSPAN1-201ENST00000372003 IDI1Q13907 227 aa16.04■□□□□ 0.16
TSPAN1-201ENST00000372003 E9PCH4 1651 aa16.03■□□□□ 0.16
TSPAN1-201ENST00000372003 NOS1P29475 1434 aa16.03■□□□□ 0.16
TSPAN1-201ENST00000372003 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
TSPAN1-201ENST00000372003 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
TSPAN1-201ENST00000372003 SPATA31D1Q6ZQQ2 1576 aa16.02■□□□□ 0.15
TSPAN1-201ENST00000372003 SLC52A1Q9NWF4 448 aa16.01■□□□□ 0.15
TSPAN1-201ENST00000372003 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
TSPAN1-201ENST00000372003 CFAP65Q6ZU64 1925 aaKnown RBP16.01■□□□□ 0.15
TSPAN1-201ENST00000372003 HSPA2P54652 639 aa16■□□□□ 0.15
TSPAN1-201ENST00000372003 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
TSPAN1-201ENST00000372003 PTPRTO14522 1441 aa15.99■□□□□ 0.15
TSPAN1-201ENST00000372003 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
TSPAN1-201ENST00000372003 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
TSPAN1-201ENST00000372003 SYNMO15061 1565 aa15.97■□□□□ 0.15
TSPAN1-201ENST00000372003 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
TSPAN1-201ENST00000372003 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
TSPAN1-201ENST00000372003 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
TSPAN1-201ENST00000372003 ANKRD30BQ9BXX2 1392 aa15.95■□□□□ 0.14
TSPAN1-201ENST00000372003 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
TSPAN1-201ENST00000372003 LMTK3Q96Q04 1460 aa15.95■□□□□ 0.14
TSPAN1-201ENST00000372003 NEFLP07196 543 aa15.94■□□□□ 0.14
TSPAN1-201ENST00000372003 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
TSPAN1-201ENST00000372003 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
TSPAN1-201ENST00000372003 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
TSPAN1-201ENST00000372003 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
TSPAN1-201ENST00000372003 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
TSPAN1-201ENST00000372003 TRPM2O94759 1503 aa15.92■□□□□ 0.14
TSPAN1-201ENST00000372003 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
TSPAN1-201ENST00000372003 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
TSPAN1-201ENST00000372003 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms