RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 CEP170BQ9Y4F5 1589 aaPredicted RBP22.41■■□□□ 1.18
EDF1-202ENST00000371648 PKD2Q13563 968 aa22.4■■□□□ 1.18
EDF1-202ENST00000371648 LTBP4Q8N2S1 1624 aa22.39■■□□□ 1.17
EDF1-202ENST00000371648 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
EDF1-202ENST00000371648 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
EDF1-202ENST00000371648 TNRQ92752 1358 aa22.37■■□□□ 1.17
EDF1-202ENST00000371648 ZNF335Q9H4Z2 1342 aaPredicted RBP22.36■■□□□ 1.17
EDF1-202ENST00000371648 MYOM3Q5VTT5 1437 aa22.36■■□□□ 1.17
EDF1-202ENST00000371648 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
EDF1-202ENST00000371648 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
EDF1-202ENST00000371648 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
EDF1-202ENST00000371648 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
EDF1-202ENST00000371648 PZPP20742 1482 aa22.34■■□□□ 1.17
EDF1-202ENST00000371648 TCOF1Q13428 1488 aaKnown RBP22.34■■□□□ 1.17
EDF1-202ENST00000371648 DNMT1P26358 1616 aaKnown RBP22.31■■□□□ 1.16
EDF1-202ENST00000371648 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
EDF1-202ENST00000371648 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
EDF1-202ENST00000371648 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
EDF1-202ENST00000371648 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
EDF1-202ENST00000371648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.151e-6■■□□□ 12.1
EDF1-202ENST00000371648 ANKLE2Q86XL3 938 aa22.24■■□□□ 1.15
EDF1-202ENST00000371648 ABCC3O15438 1527 aa22.23■■□□□ 1.15
EDF1-202ENST00000371648 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
EDF1-202ENST00000371648 FAM50AQ14320 339 aaKnown RBP22.23■■□□□ 1.15
EDF1-202ENST00000371648 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
EDF1-202ENST00000371648 RNF17Q9BXT8 1623 aaKnown RBP22.23■■□□□ 1.15
EDF1-202ENST00000371648 PTPN23Q9H3S7 1636 aa22.23■■□□□ 1.15
EDF1-202ENST00000371648 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
EDF1-202ENST00000371648 ABCC5O15440 1437 aa22.22■■□□□ 1.15
EDF1-202ENST00000371648 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
EDF1-202ENST00000371648 KIF15Q9NS87 1388 aa22.2■■□□□ 1.14
EDF1-202ENST00000371648 DUOX2Q9NRD8 1548 aa22.2■■□□□ 1.14
EDF1-202ENST00000371648 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
EDF1-202ENST00000371648 EIF2AK4Q9P2K8 1649 aaKnown RBP22.19■■□□□ 1.14
EDF1-202ENST00000371648 DISP3Q9P2K9 1392 aa22.18■■□□□ 1.14
EDF1-202ENST00000371648 NEURL4Q96JN8 1562 aa22.17■■□□□ 1.14
EDF1-202ENST00000371648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.146e-8■■■□□ 16
EDF1-202ENST00000371648 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
EDF1-202ENST00000371648 CHIC2Q9UKJ5 165 aa22.16■■□□□ 1.14
EDF1-202ENST00000371648 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
EDF1-202ENST00000371648 DAPK1P53355 1430 aa22.15■■□□□ 1.14
EDF1-202ENST00000371648 ZC3H13Q5T200 1668 aaKnown RBP22.15■■□□□ 1.14
EDF1-202ENST00000371648 SPATA31D1Q6ZQQ2 1576 aa22.15■■□□□ 1.14
EDF1-202ENST00000371648 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
EDF1-202ENST00000371648 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.14
EDF1-202ENST00000371648 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.13
EDF1-202ENST00000371648 ERBINQ96RT1 1412 aa22.12■■□□□ 1.13
EDF1-202ENST00000371648 CEP152O94986 1710 aa22.11■■□□□ 1.13
EDF1-202ENST00000371648 CROCC2H7BZ55 1655 aa22.1■■□□□ 1.13
EDF1-202ENST00000371648 MED14O60244 1454 aa22.09■■□□□ 1.13
EDF1-202ENST00000371648 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
EDF1-202ENST00000371648 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.13
EDF1-202ENST00000371648 CPS1P31327 1500 aa22.08■■□□□ 1.13
EDF1-202ENST00000371648 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
EDF1-202ENST00000371648 ILDR2Q71H61 639 aa22.07■■□□□ 1.12
EDF1-202ENST00000371648 KANK1Q14678 1352 aa22.07■■□□□ 1.12
EDF1-202ENST00000371648 PRDM15P57071 1507 aaPredicted RBP22.06■■□□□ 1.12
EDF1-202ENST00000371648 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
EDF1-202ENST00000371648 PIP4K2BP78356 416 aa22.06■■□□□ 1.12
EDF1-202ENST00000371648 ARHGAP31Q2M1Z3 1444 aa22.06■■□□□ 1.12
EDF1-202ENST00000371648 VWDEQ8N2E2 1590 aa22.05■■□□□ 1.12
EDF1-202ENST00000371648 TOM1O60784 492 aa22.05■■□□□ 1.12
EDF1-202ENST00000371648 ITGAEP38570 1179 aa22.05■■□□□ 1.12
EDF1-202ENST00000371648 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
EDF1-202ENST00000371648 LTKP29376 864 aa22.02■■□□□ 1.12
EDF1-202ENST00000371648 IQGAP1P46940 1657 aa22.01■■□□□ 1.11
EDF1-202ENST00000371648 STAG3Q9UJ98 1225 aa22.01■■□□□ 1.11
EDF1-202ENST00000371648 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
EDF1-202ENST00000371648 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
EDF1-202ENST00000371648 HSPA1LP34931 641 aa21.99■■□□□ 1.11
EDF1-202ENST00000371648 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
EDF1-202ENST00000371648 IDI1Q13907 227 aa21.97■■□□□ 1.11
EDF1-202ENST00000371648 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
EDF1-202ENST00000371648 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
EDF1-202ENST00000371648 SLIT1O75093 1534 aa21.95■■□□□ 1.1
EDF1-202ENST00000371648 LMTK2Q8IWU2 1503 aa21.95■■□□□ 1.1
EDF1-202ENST00000371648 PIK3C2BO00750 1634 aa21.93■■□□□ 1.1
EDF1-202ENST00000371648 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
EDF1-202ENST00000371648 TMEM2Q9UHN6 1383 aa21.93■■□□□ 1.1
EDF1-202ENST00000371648 ANKRD50Q9ULJ7 1429 aa21.92■■□□□ 1.1
EDF1-202ENST00000371648 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
EDF1-202ENST00000371648 SOCS7O14512 581 aa21.9■■□□□ 1.1
EDF1-202ENST00000371648 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
EDF1-202ENST00000371648 NOS1P29475 1434 aa21.89■■□□□ 1.09
EDF1-202ENST00000371648 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.09
EDF1-202ENST00000371648 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
EDF1-202ENST00000371648 SYNMO15061 1565 aa21.87■■□□□ 1.09
EDF1-202ENST00000371648 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
EDF1-202ENST00000371648 ALKQ9UM73 1620 aa21.87■■□□□ 1.09
EDF1-202ENST00000371648 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
EDF1-202ENST00000371648 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
EDF1-202ENST00000371648 BCANQ96GW7 911 aa21.83■■□□□ 1.09
EDF1-202ENST00000371648 KDM5AP29375 1690 aaKnown RBP21.8■■□□□ 1.08
EDF1-202ENST00000371648 RPRD2Q5VT52 1461 aaKnown RBP21.8■■□□□ 1.08
EDF1-202ENST00000371648 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
EDF1-202ENST00000371648 KCNA6P17658 529 aa21.79■■□□□ 1.08
EDF1-202ENST00000371648 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
EDF1-202ENST00000371648 RBM33Q96EV2 1170 aaKnown RBP21.77■■□□□ 1.08
EDF1-202ENST00000371648 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
EDF1-202ENST00000371648 PROSER2Q86WR7 435 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms