RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 RALBP1Q15311 655 aa12.11□□□□□ -0.47
HMGCLL1-204ENST00000370852 MYH16Q9H6N6 1097 aa12.11□□□□□ -0.47
HMGCLL1-204ENST00000370852 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
HMGCLL1-204ENST00000370852 KDM5CP41229 1560 aa12.11□□□□□ -0.47
HMGCLL1-204ENST00000370852 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
HMGCLL1-204ENST00000370852 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
HMGCLL1-204ENST00000370852 ZHX1Q9UKY1 873 aaPredicted RBP12.1□□□□□ -0.47
HMGCLL1-204ENST00000370852 KDM2AQ9Y2K7 1162 aa12.1□□□□□ -0.47
HMGCLL1-204ENST00000370852 BECN1Q14457 450 aa12.1□□□□□ -0.47
HMGCLL1-204ENST00000370852 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
HMGCLL1-204ENST00000370852 BCAR3O75815 825 aa12.09□□□□□ -0.47
HMGCLL1-204ENST00000370852 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
HMGCLL1-204ENST00000370852 MRE11P49959 708 aa12.09□□□□□ -0.47
HMGCLL1-204ENST00000370852 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
HMGCLL1-204ENST00000370852 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
HMGCLL1-204ENST00000370852 ADAMTS8Q9UP79 889 aa12.08□□□□□ -0.48
HMGCLL1-204ENST00000370852 TPM2P07951 284 aa12.07□□□□□ -0.48
HMGCLL1-204ENST00000370852 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
HMGCLL1-204ENST00000370852 THOC2Q8NI27 1593 aaKnown RBP12.07□□□□□ -0.48
HMGCLL1-204ENST00000370852 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
HMGCLL1-204ENST00000370852 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
HMGCLL1-204ENST00000370852 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
HMGCLL1-204ENST00000370852 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
HMGCLL1-204ENST00000370852 PARD3Q8TEW0 1356 aa12.06□□□□□ -0.48
HMGCLL1-204ENST00000370852 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
HMGCLL1-204ENST00000370852 TRIM44Q96DX7 344 aaPredicted RBP12.05□□□□□ -0.48
HMGCLL1-204ENST00000370852 UGGT2Q9NYU1 1516 aa12.05□□□□□ -0.48
HMGCLL1-204ENST00000370852 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
HMGCLL1-204ENST00000370852 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-204ENST00000370852 BLMP54132 1417 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-204ENST00000370852 TBC1D32Q96NH3 1257 aa12.03□□□□□ -0.48
HMGCLL1-204ENST00000370852 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
HMGCLL1-204ENST00000370852 R3HCC1Q9Y3T6 440 aaKnown RBP12.02□□□□□ -0.48
HMGCLL1-204ENST00000370852 ZMYM4Q5VZL5 1548 aa12.02□□□□□ -0.48
HMGCLL1-204ENST00000370852 PANK1Q8TE04 598 aa12.02□□□□□ -0.49
HMGCLL1-204ENST00000370852 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
HMGCLL1-204ENST00000370852 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
HMGCLL1-204ENST00000370852 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
HMGCLL1-204ENST00000370852 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
HMGCLL1-204ENST00000370852 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-204ENST00000370852 TNNQ9UQP3 1299 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 GRIN2BQ13224 1484 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 E9PCH4 1651 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 PZPP20742 1482 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 SLC24A1O60721 1099 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 PDE4CQ08493 712 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 PKD2Q13563 968 aa12□□□□□ -0.49
HMGCLL1-204ENST00000370852 KIF14Q15058 1648 aa11.99□□□□□ -0.49
HMGCLL1-204ENST00000370852 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
HMGCLL1-204ENST00000370852 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
HMGCLL1-204ENST00000370852 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
HMGCLL1-204ENST00000370852 OFD1O75665 1012 aa11.98□□□□□ -0.49
HMGCLL1-204ENST00000370852 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
HMGCLL1-204ENST00000370852 EHBP1L1Q8N3D4 1523 aa11.98□□□□□ -0.49
HMGCLL1-204ENST00000370852 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
HMGCLL1-204ENST00000370852 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
HMGCLL1-204ENST00000370852 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 PANK3Q9H999 370 aa11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
HMGCLL1-204ENST00000370852 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
HMGCLL1-204ENST00000370852 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
HMGCLL1-204ENST00000370852 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.5
HMGCLL1-204ENST00000370852 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 TNPO1Q92973 898 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 UQCRHLA0A096LP55 91 aa11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 UQCRHP07919 91 aa11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 AEBP2Q6ZN18 517 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-204ENST00000370852 ABCC5O15440 1437 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 DAPK1P53355 1430 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 RALGAPBQ86X10 1494 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 ZSCAN30Q86W11 494 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 TSC1Q92574 1164 aa11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 UPF2Q9HAU5 1272 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-204ENST00000370852 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
HMGCLL1-204ENST00000370852 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
HMGCLL1-204ENST00000370852 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-204ENST00000370852 MAPK8IP3Q9UPT6 1336 aa11.92□□□□□ -0.5
HMGCLL1-204ENST00000370852 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
HMGCLL1-204ENST00000370852 CTTNBP2Q8WZ74 1663 aa11.92□□□□□ -0.5
HMGCLL1-204ENST00000370852 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
HMGCLL1-204ENST00000370852 C22orf23Q9BZE7 217 aa11.92□□□□□ -0.5
HMGCLL1-204ENST00000370852 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
HMGCLL1-204ENST00000370852 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
HMGCLL1-204ENST00000370852 APAF1O14727 1248 aa11.91□□□□□ -0.5
HMGCLL1-204ENST00000370852 RLBP1P12271 317 aa11.91□□□□□ -0.5
HMGCLL1-204ENST00000370852 KIAA1107Q9UPP5 1409 aa11.91□□□□□ -0.5
HMGCLL1-204ENST00000370852 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms