RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TSPY10P0CW01 314 aa20.85■□□□□ 0.93
RPF1-201ENST00000370654 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
RPF1-201ENST00000370654 ZNF335Q9H4Z2 1342 aaPredicted RBP20.83■□□□□ 0.93
RPF1-201ENST00000370654 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.93
RPF1-201ENST00000370654 PLA2R1Q13018 1463 aa20.83■□□□□ 0.93
RPF1-201ENST00000370654 KDM5DQ9BY66 1539 aa20.83■□□□□ 0.93
RPF1-201ENST00000370654 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.92
RPF1-201ENST00000370654 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
RPF1-201ENST00000370654 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
RPF1-201ENST00000370654 MAST1Q9Y2H9 1570 aa20.82■□□□□ 0.92
RPF1-201ENST00000370654 PZPP20742 1482 aa20.81■□□□□ 0.92
RPF1-201ENST00000370654 TNRQ92752 1358 aa20.81■□□□□ 0.92
RPF1-201ENST00000370654 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
RPF1-201ENST00000370654 PKD2Q13563 968 aa20.79■□□□□ 0.92
RPF1-201ENST00000370654 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
RPF1-201ENST00000370654 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
RPF1-201ENST00000370654 MROH1Q8NDA8 1641 aa20.76■□□□□ 0.91
RPF1-201ENST00000370654 ABCC3O15438 1527 aa20.75■□□□□ 0.91
RPF1-201ENST00000370654 ABCC5O15440 1437 aa20.73■□□□□ 0.91
RPF1-201ENST00000370654 NEURL4Q96JN8 1562 aa20.73■□□□□ 0.91
RPF1-201ENST00000370654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPF1-201ENST00000370654 IQSEC2Q5JU85 1478 aa20.71■□□□□ 0.91
RPF1-201ENST00000370654 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
RPF1-201ENST00000370654 EIF2AK4Q9P2K8 1649 aaKnown RBP20.7■□□□□ 0.9
RPF1-201ENST00000370654 RRP7BPQ9NSQ0 103 aa20.69■□□□□ 0.9
RPF1-201ENST00000370654 CEP152O94986 1710 aa20.68■□□□□ 0.9
RPF1-201ENST00000370654 DUOX2Q9NRD8 1548 aa20.68■□□□□ 0.9
RPF1-201ENST00000370654 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
RPF1-201ENST00000370654 CROCC2H7BZ55 1655 aa20.67■□□□□ 0.9
RPF1-201ENST00000370654 SPATA31D1Q6ZQQ2 1576 aa20.67■□□□□ 0.9
RPF1-201ENST00000370654 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
RPF1-201ENST00000370654 APLP2Q06481 763 aa20.67■□□□□ 0.9
RPF1-201ENST00000370654 UGGT1Q9NYU2 1555 aa20.67■□□□□ 0.9
RPF1-201ENST00000370654 ERVK-7P63135 1459 aa20.66■□□□□ 0.9
RPF1-201ENST00000370654 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
RPF1-201ENST00000370654 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
RPF1-201ENST00000370654 DAPK1P53355 1430 aa20.66■□□□□ 0.9
RPF1-201ENST00000370654 FGD6Q6ZV73 1430 aa20.66■□□□□ 0.9
RPF1-201ENST00000370654 SHANK2Q9UPX8 1470 aa20.65■□□□□ 0.9
RPF1-201ENST00000370654 CFAP65Q6ZU64 1925 aaKnown RBP20.64■□□□□ 0.9
RPF1-201ENST00000370654 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.89
RPF1-201ENST00000370654 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
RPF1-201ENST00000370654 ANKLE2Q86XL3 938 aa20.63■□□□□ 0.89
RPF1-201ENST00000370654 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
RPF1-201ENST00000370654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
RPF1-201ENST00000370654 NPHP4O75161 1426 aaPredicted RBP20.6■□□□□ 0.89
RPF1-201ENST00000370654 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
RPF1-201ENST00000370654 PRDM15P57071 1507 aaPredicted RBP20.6■□□□□ 0.89
RPF1-201ENST00000370654 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
RPF1-201ENST00000370654 MED14O60244 1454 aa20.59■□□□□ 0.89
RPF1-201ENST00000370654 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
RPF1-201ENST00000370654 DISP3Q9P2K9 1392 aa20.58■□□□□ 0.89
RPF1-201ENST00000370654 DEPDC5O75140 1603 aa20.58■□□□□ 0.88
RPF1-201ENST00000370654 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
RPF1-201ENST00000370654 ARHGAP31Q2M1Z3 1444 aa20.55■□□□□ 0.88
RPF1-201ENST00000370654 IQGAP1P46940 1657 aa20.54■□□□□ 0.88
RPF1-201ENST00000370654 CPS1P31327 1500 aa20.54■□□□□ 0.88
RPF1-201ENST00000370654 STRCP1A6NGW2 1772 aa20.53■□□□□ 0.88
RPF1-201ENST00000370654 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
RPF1-201ENST00000370654 LTKP29376 864 aa20.52■□□□□ 0.88
RPF1-201ENST00000370654 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
RPF1-201ENST00000370654 ALKQ9UM73 1620 aa20.5■□□□□ 0.87
RPF1-201ENST00000370654 PIP4K2BP78356 416 aa20.49■□□□□ 0.87
RPF1-201ENST00000370654 ARHGAP23Q9P227 1491 aa20.49■□□□□ 0.87
RPF1-201ENST00000370654 PIK3C2BO00750 1634 aa20.48■□□□□ 0.87
RPF1-201ENST00000370654 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
RPF1-201ENST00000370654 LMTK2Q8IWU2 1503 aa20.47■□□□□ 0.87
RPF1-201ENST00000370654 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
RPF1-201ENST00000370654 SLIT1O75093 1534 aa20.47■□□□□ 0.87
RPF1-201ENST00000370654 HSPA1LP34931 641 aa20.46■□□□□ 0.87
RPF1-201ENST00000370654 TXNDC2Q86VQ3 553 aa20.46■□□□□ 0.87
RPF1-201ENST00000370654 KANK1Q14678 1352 aa20.46■□□□□ 0.87
RPF1-201ENST00000370654 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
RPF1-201ENST00000370654 IDI1Q13907 227 aa20.46■□□□□ 0.87
RPF1-201ENST00000370654 SYNMO15061 1565 aa20.46■□□□□ 0.87
RPF1-201ENST00000370654 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
RPF1-201ENST00000370654 TOM1O60784 492 aa20.43■□□□□ 0.86
RPF1-201ENST00000370654 NOS1P29475 1434 aa20.42■□□□□ 0.86
RPF1-201ENST00000370654 EFCAB6Q5THR3 1501 aa20.41■□□□□ 0.86
RPF1-201ENST00000370654 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
RPF1-201ENST00000370654 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
RPF1-201ENST00000370654 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
RPF1-201ENST00000370654 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
RPF1-201ENST00000370654 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
RPF1-201ENST00000370654 EID1Q9Y6B2 187 aa20.36■□□□□ 0.85
RPF1-201ENST00000370654 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
RPF1-201ENST00000370654 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
RPF1-201ENST00000370654 TET3O43151 1660 aa20.33■□□□□ 0.84
RPF1-201ENST00000370654 ADGRB3O60242 1522 aa20.33■□□□□ 0.84
RPF1-201ENST00000370654 SOCS7O14512 581 aa20.33■□□□□ 0.84
RPF1-201ENST00000370654 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.84
RPF1-201ENST00000370654 ITGAEP38570 1179 aa20.3■□□□□ 0.84
RPF1-201ENST00000370654 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
RPF1-201ENST00000370654 SLC52A1Q9NWF4 448 aa20.3■□□□□ 0.84
RPF1-201ENST00000370654 UNC13BO14795 1591 aa20.3■□□□□ 0.84
RPF1-201ENST00000370654 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
RPF1-201ENST00000370654 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
RPF1-201ENST00000370654 RPRD2Q5VT52 1461 aaKnown RBP20.29■□□□□ 0.84
RPF1-201ENST00000370654 ROCK1Q13464 1354 aa20.27■□□□□ 0.84
RPF1-201ENST00000370654 KCNA6P17658 529 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms