RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 KIF3BO15066 747 aa25.39■■□□□ 1.66
VMA21-202ENST00000370361 PLA2R1Q13018 1463 aa25.39■■□□□ 1.65
VMA21-202ENST00000370361 CEP170BQ9Y4F5 1589 aaPredicted RBP25.38■■□□□ 1.65
VMA21-202ENST00000370361 CAMSAP1Q5T5Y3 1602 aa25.37■■□□□ 1.65
VMA21-202ENST00000370361 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
VMA21-202ENST00000370361 PZPP20742 1482 aa25.34■■□□□ 1.65
VMA21-202ENST00000370361 EIF2AK4Q9P2K8 1649 aaKnown RBP25.34■■□□□ 1.65
VMA21-202ENST00000370361 PKD2Q13563 968 aa25.34■■□□□ 1.65
VMA21-202ENST00000370361 WASHC2CQ9Y4E1 1318 aa25.33■■□□□ 1.64
VMA21-202ENST00000370361 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
VMA21-202ENST00000370361 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
VMA21-202ENST00000370361 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
VMA21-202ENST00000370361 IQSEC2Q5JU85 1478 aa25.29■■□□□ 1.64
VMA21-202ENST00000370361 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
VMA21-202ENST00000370361 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
VMA21-202ENST00000370361 TNRQ92752 1358 aa25.27■■□□□ 1.64
VMA21-202ENST00000370361 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
VMA21-202ENST00000370361 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
VMA21-202ENST00000370361 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
VMA21-202ENST00000370361 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
VMA21-202ENST00000370361 LTBP4Q8N2S1 1624 aa25.23■■□□□ 1.63
VMA21-202ENST00000370361 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
VMA21-202ENST00000370361 ABCC3O15438 1527 aa25.21■■□□□ 1.63
VMA21-202ENST00000370361 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.63
VMA21-202ENST00000370361 ERBINQ96RT1 1412 aa25.2■■□□□ 1.63
VMA21-202ENST00000370361 NCKAP5LQ9HCH0 1330 aa25.19■■□□□ 1.62
VMA21-202ENST00000370361 ABCC5O15440 1437 aa25.18■■□□□ 1.62
VMA21-202ENST00000370361 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
VMA21-202ENST00000370361 FBXO31Q5XUX0 539 aaPredicted RBP25.17■■□□□ 1.62
VMA21-202ENST00000370361 DAPK1P53355 1430 aa25.16■■□□□ 1.62
VMA21-202ENST00000370361 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
VMA21-202ENST00000370361 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
VMA21-202ENST00000370361 SPATA31D1Q6ZQQ2 1576 aa25.15■■□□□ 1.62
VMA21-202ENST00000370361 THEMISQ8N1K5 641 aaPredicted RBP25.15■■□□□ 1.62
VMA21-202ENST00000370361 PRDM15P57071 1507 aaPredicted RBP25.14■■□□□ 1.62
VMA21-202ENST00000370361 UGGT1Q9NYU2 1555 aa25.13■■□□□ 1.61
VMA21-202ENST00000370361 ANKRD30AQ9BXX3 1397 aa25.11■■□□□ 1.61
VMA21-202ENST00000370361 ERVK-7P63135 1459 aa25.1■■□□□ 1.61
VMA21-202ENST00000370361 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
VMA21-202ENST00000370361 ANKLE2Q86XL3 938 aa25.09■■□□□ 1.61
VMA21-202ENST00000370361 DEPDC5O75140 1603 aa25.08■■□□□ 1.61
VMA21-202ENST00000370361 CEP152O94986 1710 aa25.07■■□□□ 1.6
VMA21-202ENST00000370361 ZNF335Q9H4Z2 1342 aaPredicted RBP25.07■■□□□ 1.6
VMA21-202ENST00000370361 KANK1Q14678 1352 aa25.06■■□□□ 1.6
VMA21-202ENST00000370361 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
VMA21-202ENST00000370361 RRP7BPQ9NSQ0 103 aa25.06■■□□□ 1.6
VMA21-202ENST00000370361 MED14O60244 1454 aa25.05■■□□□ 1.6
VMA21-202ENST00000370361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.6
VMA21-202ENST00000370361 ADGRL2O95490 1459 aa25.03■■□□□ 1.6
VMA21-202ENST00000370361 CPS1P31327 1500 aa25.03■■□□□ 1.6
VMA21-202ENST00000370361 LMTK2Q8IWU2 1503 aa25■■□□□ 1.59
VMA21-202ENST00000370361 NPHP4O75161 1426 aaPredicted RBP24.99■■□□□ 1.59
VMA21-202ENST00000370361 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
VMA21-202ENST00000370361 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
VMA21-202ENST00000370361 UBR1Q8IWV7 1749 aa24.95■■□□□ 1.59
VMA21-202ENST00000370361 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
VMA21-202ENST00000370361 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
VMA21-202ENST00000370361 CHIC2Q9UKJ5 165 aa24.93■■□□□ 1.58
VMA21-202ENST00000370361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.58
VMA21-202ENST00000370361 SLIT1O75093 1534 aa24.91■■□□□ 1.58
VMA21-202ENST00000370361 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
VMA21-202ENST00000370361 UBAP1LF5GYI3 381 aa24.91■■□□□ 1.58
VMA21-202ENST00000370361 SCAF11Q99590 1463 aaKnown RBP24.9■■□□□ 1.58
VMA21-202ENST00000370361 ARHGAP23Q9P227 1491 aa24.89■■□□□ 1.58
VMA21-202ENST00000370361 ANKRD50Q9ULJ7 1429 aa24.89■■□□□ 1.58
VMA21-202ENST00000370361 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.57
VMA21-202ENST00000370361 RPRD2Q5VT52 1461 aaKnown RBP24.89■■□□□ 1.57
VMA21-202ENST00000370361 EID1Q9Y6B2 187 aa24.86■■□□□ 1.57
VMA21-202ENST00000370361 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
VMA21-202ENST00000370361 TOM1O60784 492 aa24.84■■□□□ 1.57
VMA21-202ENST00000370361 SYNMO15061 1565 aa24.84■■□□□ 1.57
VMA21-202ENST00000370361 PIK3C2BO00750 1634 aa24.83■■□□□ 1.57
VMA21-202ENST00000370361 NOS1P29475 1434 aa24.83■■□□□ 1.57
VMA21-202ENST00000370361 STAG3Q9UJ98 1225 aa24.82■■□□□ 1.56
VMA21-202ENST00000370361 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
VMA21-202ENST00000370361 TXNDC2Q86VQ3 553 aa24.81■■□□□ 1.56
VMA21-202ENST00000370361 SLC52A1Q9NWF4 448 aa24.81■■□□□ 1.56
VMA21-202ENST00000370361 TET3O43151 1660 aa24.79■■□□□ 1.56
VMA21-202ENST00000370361 UNC13BO14795 1591 aa24.78■■□□□ 1.56
VMA21-202ENST00000370361 ADGRB3O60242 1522 aa24.76■■□□□ 1.55
VMA21-202ENST00000370361 LTKP29376 864 aa24.76■■□□□ 1.55
VMA21-202ENST00000370361 IDI1Q13907 227 aa24.76■■□□□ 1.55
VMA21-202ENST00000370361 DISP3Q9P2K9 1392 aa24.76■■□□□ 1.55
VMA21-202ENST00000370361 GCC2Q8IWJ2 1684 aa24.75■■□□□ 1.55
VMA21-202ENST00000370361 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
VMA21-202ENST00000370361 STRCP1A6NGW2 1772 aa24.71■■□□□ 1.55
VMA21-202ENST00000370361 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
VMA21-202ENST00000370361 HDGFP51858 240 aaKnown RBP24.68■■□□□ 1.54
VMA21-202ENST00000370361 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
VMA21-202ENST00000370361 PIP4K2BP78356 416 aa24.65■■□□□ 1.54
VMA21-202ENST00000370361 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
VMA21-202ENST00000370361 E9PCH4 1651 aa24.61■■□□□ 1.53
VMA21-202ENST00000370361 TMEM131LA2VDJ0 1609 aa24.6■■□□□ 1.53
VMA21-202ENST00000370361 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
VMA21-202ENST00000370361 NKTRP30414 1462 aaKnown RBP24.59■■□□□ 1.53
VMA21-202ENST00000370361 NUP155O75694 1391 aa24.59■■□□□ 1.53
VMA21-202ENST00000370361 KCNA6P17658 529 aa24.59■■□□□ 1.53
VMA21-202ENST00000370361 HSPA1LP34931 641 aa24.59■■□□□ 1.53
VMA21-202ENST00000370361 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
VMA21-202ENST00000370361 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms