RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RAB3GAP2Q9H2M9 1393 aa10.73□□□□□ -0.69
ABCA4-201ENST00000370225 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
ABCA4-201ENST00000370225 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
ABCA4-201ENST00000370225 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
ABCA4-201ENST00000370225 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
ABCA4-201ENST00000370225 NOC3LQ8WTT2 800 aaKnown RBP10.72□□□□□ -0.69
ABCA4-201ENST00000370225 FBXW7Q969H0 707 aa10.72□□□□□ -0.69
ABCA4-201ENST00000370225 NECTIN2Q92692 538 aa10.72□□□□□ -0.69
ABCA4-201ENST00000370225 ARID3AQ99856 593 aa10.72□□□□□ -0.69
ABCA4-201ENST00000370225 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
ABCA4-201ENST00000370225 MROH2BQ7Z745 1585 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 MARCH6O60337 910 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
ABCA4-201ENST00000370225 RALBP1Q15311 655 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 SMARCA2P51531 1590 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 JPH4Q96JJ6 628 aa10.7□□□□□ -0.7
ABCA4-201ENST00000370225 EIF2S2P20042 333 aaKnown RBP10.69□□□□□ -0.7
ABCA4-201ENST00000370225 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
ABCA4-201ENST00000370225 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
ABCA4-201ENST00000370225 L3MBTL2Q969R5 705 aa10.68□□□□□ -0.7
ABCA4-201ENST00000370225 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
ABCA4-201ENST00000370225 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
ABCA4-201ENST00000370225 WIZO95785 1651 aa10.68□□□□□ -0.7
ABCA4-201ENST00000370225 HMMRO75330 724 aa10.68□□□□□ -0.7
ABCA4-201ENST00000370225 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
ABCA4-201ENST00000370225 COG3Q96JB2 828 aa10.67□□□□□ -0.7
ABCA4-201ENST00000370225 PSME1Q06323 249 aa10.67□□□□□ -0.7
ABCA4-201ENST00000370225 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
ABCA4-201ENST00000370225 CENPJQ9HC77 1338 aaPredicted RBP10.66□□□□□ -0.7
ABCA4-201ENST00000370225 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 TTC5Q8N0Z6 440 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 SAMD1Q6SPF0 538 aaPredicted RBP10.65□□□□□ -0.7
ABCA4-201ENST00000370225 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 FOXD4L6Q3SYB3 417 aaPredicted RBP10.65□□□□□ -0.7
ABCA4-201ENST00000370225 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
ABCA4-201ENST00000370225 FOXD4L3Q6VB84 417 aaPredicted RBP10.65□□□□□ -0.7
ABCA4-201ENST00000370225 LMOD3Q0VAK6 560 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 GBP4Q96PP9 640 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 PANK3Q9H999 370 aa10.65□□□□□ -0.7
ABCA4-201ENST00000370225 PES1O00541 588 aaKnown RBP10.64□□□□□ -0.71
ABCA4-201ENST00000370225 HTATSF1O43719 755 aaKnown RBP10.64□□□□□ -0.71
ABCA4-201ENST00000370225 TCERG1O14776 1098 aaKnown RBP10.64□□□□□ -0.71
ABCA4-201ENST00000370225 TEFQ10587 303 aa10.64□□□□□ -0.71
ABCA4-201ENST00000370225 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
ABCA4-201ENST00000370225 CHMP4AQ9BY43 222 aa10.64□□□□□ -0.71
ABCA4-201ENST00000370225 TPM4P67936 248 aa10.63□□□□□ -0.71
ABCA4-201ENST00000370225 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
ABCA4-201ENST00000370225 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
ABCA4-201ENST00000370225 CTDP1Q9Y5B0 961 aaPredicted RBP10.62□□□□□ -0.71
ABCA4-201ENST00000370225 CCDC144AA2RUR9 1427 aa10.62□□□□□ -0.71
ABCA4-201ENST00000370225 HDAC5Q9UQL6 1122 aa10.62□□□□□ -0.71
ABCA4-201ENST00000370225 VPS37DQ86XT2 251 aa10.62□□□□□ -0.71
ABCA4-201ENST00000370225 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
ABCA4-201ENST00000370225 PLIN1O60240 522 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 TCEAL9Q9UHQ7 104 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
ABCA4-201ENST00000370225 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
ABCA4-201ENST00000370225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
ABCA4-201ENST00000370225 H3BQV1 296 aa10.6□□□□□ -0.71
ABCA4-201ENST00000370225 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
ABCA4-201ENST00000370225 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
ABCA4-201ENST00000370225 NOL10Q9BSC4 688 aaKnown RBP10.6□□□□□ -0.71
ABCA4-201ENST00000370225 C9orf78Q9NZ63 289 aaPredicted RBP10.6□□□□□ -0.71
ABCA4-201ENST00000370225 APPP05067 770 aa10.6□□□□□ -0.71
ABCA4-201ENST00000370225 USP35Q9P2H5 1018 aa10.6□□□□□ -0.71
ABCA4-201ENST00000370225 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
ABCA4-201ENST00000370225 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
ABCA4-201ENST00000370225 VGFO15240 615 aaPredicted RBP10.59□□□□□ -0.71
ABCA4-201ENST00000370225 DHX16O60231 1041 aaKnown RBP10.59□□□□□ -0.71
ABCA4-201ENST00000370225 ATF3P18847 181 aa10.59□□□□□ -0.71
ABCA4-201ENST00000370225 CWC22Q9HCG8 908 aaKnown RBP10.59□□□□□ -0.71
ABCA4-201ENST00000370225 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
ABCA4-201ENST00000370225 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
ABCA4-201ENST00000370225 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.72
ABCA4-201ENST00000370225 PTPRGP23470 1445 aa10.58□□□□□ -0.72
ABCA4-201ENST00000370225 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
ABCA4-201ENST00000370225 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
ABCA4-201ENST00000370225 TPD52L1Q16890 204 aaPredicted RBP10.58□□□□□ -0.72
ABCA4-201ENST00000370225 MCTP1Q6DN14 999 aa10.58□□□□□ -0.72
ABCA4-201ENST00000370225 CCDC34Q96HJ3 373 aa10.58□□□□□ -0.72
ABCA4-201ENST00000370225 PPP1R1BQ9UD71 204 aaPredicted RBP10.58□□□□□ -0.72
ABCA4-201ENST00000370225 FYB1O15117 783 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 NLRP13Q86W25 1043 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 FAM184AQ8NB25 1140 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 CADPSQ9ULU8 1353 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
ABCA4-201ENST00000370225 FAM177BA6PVY3 158 aa10.56□□□□□ -0.72
ABCA4-201ENST00000370225 AIMP1Q12904 312 aaKnown RBP10.56□□□□□ -0.72
ABCA4-201ENST00000370225 HMOX1P09601 288 aa10.56□□□□□ -0.72
ABCA4-201ENST00000370225 FOSBP53539 338 aa10.56□□□□□ -0.72
ABCA4-201ENST00000370225 ST18O60284 1047 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms