RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 FAM135AQ9P2D6 1515 aa31.95■■■□□ 2.7
SMNDC1-201ENST00000369592 NPATQ14207 1427 aa31.94■■■□□ 2.7
SMNDC1-201ENST00000369592 ILDR2Q71H61 639 aa31.93■■■□□ 2.7
SMNDC1-201ENST00000369592 RNF17Q9BXT8 1623 aaKnown RBP31.93■■■□□ 2.7
SMNDC1-201ENST00000369592 EIF2AK4Q9P2K8 1649 aaKnown RBP31.93■■■□□ 2.7
SMNDC1-201ENST00000369592 DUOX2Q9NRD8 1548 aa31.9■■■□□ 2.7
SMNDC1-201ENST00000369592 PTPRKQ15262 1439 aa31.89■■■□□ 2.7
SMNDC1-201ENST00000369592 UHRF1BP1Q6BDS2 1440 aa31.89■■■□□ 2.7
SMNDC1-201ENST00000369592 SOCS7O14512 581 aa31.87■■■□□ 2.69
SMNDC1-201ENST00000369592 KDM5DQ9BY66 1539 aa31.86■■■□□ 2.69
SMNDC1-201ENST00000369592 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
SMNDC1-201ENST00000369592 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
SMNDC1-201ENST00000369592 ADGRL2O95490 1459 aa31.81■■■□□ 2.68
SMNDC1-201ENST00000369592 NCOA1Q15788 1441 aa31.81■■■□□ 2.68
SMNDC1-201ENST00000369592 ERBINQ96RT1 1412 aa31.8■■■□□ 2.68
SMNDC1-201ENST00000369592 STRCQ7RTU9 1775 aa31.79■■■□□ 2.68
SMNDC1-201ENST00000369592 ABCC3O15438 1527 aa31.77■■■□□ 2.68
SMNDC1-201ENST00000369592 RRP7BPQ9NSQ0 103 aa31.77■■■□□ 2.68
SMNDC1-201ENST00000369592 PZPP20742 1482 aa31.77■■■□□ 2.68
SMNDC1-201ENST00000369592 WASHC2CQ9Y4E1 1318 aa31.76■■■□□ 2.68
SMNDC1-201ENST00000369592 ANKRD30AQ9BXX3 1397 aa31.76■■■□□ 2.67
SMNDC1-201ENST00000369592 ZC3H13Q5T200 1668 aaKnown RBP31.76■■■□□ 2.67
SMNDC1-201ENST00000369592 ZNF142P52746 1687 aaPredicted RBP31.74■■■□□ 2.67
SMNDC1-201ENST00000369592 FAM50AQ14320 339 aaKnown RBP31.74■■■□□ 2.67
SMNDC1-201ENST00000369592 DEPDC5O75140 1603 aa31.74■■■□□ 2.67
SMNDC1-201ENST00000369592 MYO3AQ8NEV4 1616 aa31.74■■■□□ 2.67
SMNDC1-201ENST00000369592 PRDM15P57071 1507 aaPredicted RBP31.73■■■□□ 2.67
SMNDC1-201ENST00000369592 SPATA31D1Q6ZQQ2 1576 aa31.73■■■□□ 2.67
SMNDC1-201ENST00000369592 CHIC2Q9UKJ5 165 aa31.72■■■□□ 2.67
SMNDC1-201ENST00000369592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.7■■■□□ 2.67
SMNDC1-201ENST00000369592 PPARGC1BQ86YN6 1023 aaKnown RBP31.69■■■□□ 2.66
SMNDC1-201ENST00000369592 FBXO31Q5XUX0 539 aaPredicted RBP31.68■■■□□ 2.66
SMNDC1-201ENST00000369592 CEP152O94986 1710 aa31.67■■■□□ 2.66
SMNDC1-201ENST00000369592 CEP170BQ9Y4F5 1589 aaPredicted RBP31.67■■■□□ 2.66
SMNDC1-201ENST00000369592 DMRT2Q9Y5R5 561 aa31.66■■■□□ 2.66
SMNDC1-201ENST00000369592 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.65
SMNDC1-201ENST00000369592 TNRQ92752 1358 aa31.63■■■□□ 2.65
SMNDC1-201ENST00000369592 CAMSAP1Q5T5Y3 1602 aa31.63■■■□□ 2.65
SMNDC1-201ENST00000369592 A2ML1A8K2U0 1454 aa31.62■■■□□ 2.65
SMNDC1-201ENST00000369592 ROCK1Q13464 1354 aa31.6■■■□□ 2.65
SMNDC1-201ENST00000369592 ARHGAP31Q2M1Z3 1444 aa31.59■■■□□ 2.65
SMNDC1-201ENST00000369592 RRBP1Q9P2E9 1410 aaKnown RBP31.58■■■□□ 2.65
SMNDC1-201ENST00000369592 PLA2R1Q13018 1463 aa31.58■■■□□ 2.65
SMNDC1-201ENST00000369592 LMTK2Q8IWU2 1503 aa31.57■■■□□ 2.64
SMNDC1-201ENST00000369592 PTPRTO14522 1441 aa31.57■■■□□ 2.64
SMNDC1-201ENST00000369592 ANKRD50Q9ULJ7 1429 aa31.57■■■□□ 2.64
SMNDC1-201ENST00000369592 ERVK-7P63135 1459 aa31.56■■■□□ 2.64
SMNDC1-201ENST00000369592 NLRP1Q9C000 1473 aa31.54■■■□□ 2.64
SMNDC1-201ENST00000369592 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
SMNDC1-201ENST00000369592 KANK1Q14678 1352 aa31.48■■■□□ 2.63
SMNDC1-201ENST00000369592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.48■■■□□ 2.632e-7■■■□□ 14.7
SMNDC1-201ENST00000369592 UNC13BO14795 1591 aa31.45■■■□□ 2.63
SMNDC1-201ENST00000369592 LTBP4Q8N2S1 1624 aa31.45■■■□□ 2.62
SMNDC1-201ENST00000369592 PKD2Q13563 968 aa31.44■■■□□ 2.62
SMNDC1-201ENST00000369592 NCKAP5LQ9HCH0 1330 aa31.44■■■□□ 2.62
SMNDC1-201ENST00000369592 EFCAB6Q5THR3 1501 aa31.43■■■□□ 2.62
SMNDC1-201ENST00000369592 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
SMNDC1-201ENST00000369592 IQSEC2Q5JU85 1478 aa31.4■■■□□ 2.62
SMNDC1-201ENST00000369592 ITGAEP38570 1179 aa31.37■■■□□ 2.61
SMNDC1-201ENST00000369592 NEURL4Q96JN8 1562 aa31.37■■■□□ 2.61
SMNDC1-201ENST00000369592 POLR1AO95602 1720 aaPredicted RBP31.36■■■□□ 2.61
SMNDC1-201ENST00000369592 UBR1Q8IWV7 1749 aa31.36■■■□□ 2.61
SMNDC1-201ENST00000369592 TET3O43151 1660 aa31.36■■■□□ 2.61
SMNDC1-201ENST00000369592 NOS1P29475 1434 aa31.36■■■□□ 2.61
SMNDC1-201ENST00000369592 THEMISQ8N1K5 641 aaPredicted RBP31.36■■■□□ 2.61
SMNDC1-201ENST00000369592 RPRD2Q5VT52 1461 aaKnown RBP31.33■■■□□ 2.61
SMNDC1-201ENST00000369592 SYNMO15061 1565 aa31.33■■■□□ 2.61
SMNDC1-201ENST00000369592 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
SMNDC1-201ENST00000369592 IQGAP3Q86VI3 1631 aa31.31■■■□□ 2.6
SMNDC1-201ENST00000369592 MED14O60244 1454 aa31.29■■■□□ 2.6
SMNDC1-201ENST00000369592 KDM5AP29375 1690 aaKnown RBP31.28■■■□□ 2.6
SMNDC1-201ENST00000369592 PIK3C2BO00750 1634 aa31.27■■■□□ 2.6
SMNDC1-201ENST00000369592 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
SMNDC1-201ENST00000369592 NAIPQ13075 1403 aa31.26■■■□□ 2.6
SMNDC1-201ENST00000369592 ANKLE2Q86XL3 938 aa31.26■■■□□ 2.59
SMNDC1-201ENST00000369592 SLIT1O75093 1534 aa31.24■■■□□ 2.59
SMNDC1-201ENST00000369592 E9PCH4 1651 aa31.24■■■□□ 2.59
SMNDC1-201ENST00000369592 IDI1Q13907 227 aa31.23■■■□□ 2.59
SMNDC1-201ENST00000369592 NUP155O75694 1391 aa31.2■■■□□ 2.59
SMNDC1-201ENST00000369592 HFM1A2PYH4 1435 aa31.19■■■□□ 2.58
SMNDC1-201ENST00000369592 NPHP4O75161 1426 aaPredicted RBP31.18■■■□□ 2.58
SMNDC1-201ENST00000369592 SLC52A1Q9NWF4 448 aa31.18■■■□□ 2.58
SMNDC1-201ENST00000369592 ZNF335Q9H4Z2 1342 aaPredicted RBP31.18■■■□□ 2.58
SMNDC1-201ENST00000369592 UBAP1LF5GYI3 381 aa31.17■■■□□ 2.58
SMNDC1-201ENST00000369592 IQGAP1P46940 1657 aa31.16■■■□□ 2.58
SMNDC1-201ENST00000369592 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
SMNDC1-201ENST00000369592 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.57
SMNDC1-201ENST00000369592 ADGRB3O60242 1522 aa31.14■■■□□ 2.57
SMNDC1-201ENST00000369592 LTKP29376 864 aa31.13■■■□□ 2.57
SMNDC1-201ENST00000369592 TMEM131LA2VDJ0 1609 aa31.07■■■□□ 2.56
SMNDC1-201ENST00000369592 MYO5BQ9ULV0 1848 aa31.07■■■□□ 2.56
SMNDC1-201ENST00000369592 TXNDC2Q86VQ3 553 aa31.06■■■□□ 2.56
SMNDC1-201ENST00000369592 STAG3Q9UJ98 1225 aa31.02■■■□□ 2.56
SMNDC1-201ENST00000369592 ZFYVE9O95405 1425 aa31■■■□□ 2.55
SMNDC1-201ENST00000369592 STRCP1A6NGW2 1772 aa31■■■□□ 2.55
SMNDC1-201ENST00000369592 CPS1P31327 1500 aa31■■■□□ 2.55
SMNDC1-201ENST00000369592 EID1Q9Y6B2 187 aa31■■■□□ 2.55
SMNDC1-201ENST00000369592 SPHKAPQ2M3C7 1700 aa31■■■□□ 2.55
SMNDC1-201ENST00000369592 MED1Q15648 1581 aaPredicted RBP30.97■■■□□ 2.55
SMNDC1-201ENST00000369592 SCAF1Q9H7N4 1312 aaKnown RBP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms