RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
PHGDH-202ENST00000369409 PKD2Q13563 968 aa24.32■■□□□ 1.48
PHGDH-202ENST00000369409 FRMPD1Q5SYB0 1578 aa24.31■■□□□ 1.48
PHGDH-202ENST00000369409 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
PHGDH-202ENST00000369409 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
PHGDH-202ENST00000369409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.485e-16■■□□□ 13.6
PHGDH-202ENST00000369409 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
PHGDH-202ENST00000369409 DHX29Q7Z478 1369 aaKnown RBP24.26■■□□□ 1.47
PHGDH-202ENST00000369409 A2MP01023 1474 aa24.25■■□□□ 1.47
PHGDH-202ENST00000369409 DIP2CQ9Y2E4 1556 aa24.25■■□□□ 1.47
PHGDH-202ENST00000369409 MROH1Q8NDA8 1641 aa24.24■■□□□ 1.47
PHGDH-202ENST00000369409 PRDM15P57071 1507 aaPredicted RBP24.24■■□□□ 1.47
PHGDH-202ENST00000369409 ZMYM4Q5VZL5 1548 aa24.22■■□□□ 1.47
PHGDH-202ENST00000369409 RNF17Q9BXT8 1623 aaKnown RBP24.21■■□□□ 1.47
PHGDH-202ENST00000369409 PPP1R15AO75807 674 aaPredicted RBP24.21■■□□□ 1.47
PHGDH-202ENST00000369409 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
PHGDH-202ENST00000369409 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.46
PHGDH-202ENST00000369409 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
PHGDH-202ENST00000369409 E9PCH4 1651 aa24.19■■□□□ 1.46
PHGDH-202ENST00000369409 TET3O43151 1660 aa24.19■■□□□ 1.46
PHGDH-202ENST00000369409 KIF3BO15066 747 aa24.18■■□□□ 1.46
PHGDH-202ENST00000369409 CEP152O94986 1710 aa24.15■■□□□ 1.46
PHGDH-202ENST00000369409 YEATS2Q9ULM3 1422 aa24.15■■□□□ 1.46
PHGDH-202ENST00000369409 KANK1Q14678 1352 aa24.14■■□□□ 1.46
PHGDH-202ENST00000369409 SPHKAPQ2M3C7 1700 aa24.12■■□□□ 1.45
PHGDH-202ENST00000369409 L3MBTL2Q969R5 705 aa24.11■■□□□ 1.45
PHGDH-202ENST00000369409 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
PHGDH-202ENST00000369409 CCDC144AA2RUR9 1427 aa24.08■■□□□ 1.45
PHGDH-202ENST00000369409 EFCAB6Q5THR3 1501 aa24.07■■□□□ 1.44
PHGDH-202ENST00000369409 ATP10AO60312 1499 aa24.07■■□□□ 1.44
PHGDH-202ENST00000369409 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
PHGDH-202ENST00000369409 LMTK2Q8IWU2 1503 aa24.05■■□□□ 1.44
PHGDH-202ENST00000369409 TRPM2O94759 1503 aa24.04■■□□□ 1.44
PHGDH-202ENST00000369409 ARHGEF40Q8TER5 1519 aa24.03■■□□□ 1.44
PHGDH-202ENST00000369409 REREQ9P2R6 1566 aa24.02■■□□□ 1.44
PHGDH-202ENST00000369409 ABCC3O15438 1527 aa24■■□□□ 1.43
PHGDH-202ENST00000369409 CAMSAP1Q5T5Y3 1602 aa24■■□□□ 1.43
PHGDH-202ENST00000369409 GGT6Q6P531 493 aa24■■□□□ 1.43
PHGDH-202ENST00000369409 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
PHGDH-202ENST00000369409 ZC3H13Q5T200 1668 aaKnown RBP24■■□□□ 1.43
PHGDH-202ENST00000369409 CLTCL1P53675 1640 aa23.99■■□□□ 1.43
PHGDH-202ENST00000369409 PTPRTO14522 1441 aa23.98■■□□□ 1.43
PHGDH-202ENST00000369409 SIGLEC1Q9BZZ2 1709 aa23.97■■□□□ 1.43
PHGDH-202ENST00000369409 DIEXFQ68CQ4 756 aaKnown RBP23.96■■□□□ 1.43
PHGDH-202ENST00000369409 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
PHGDH-202ENST00000369409 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
PHGDH-202ENST00000369409 AGLP35573 1532 aa23.92■■□□□ 1.42
PHGDH-202ENST00000369409 TRHP20396 242 aaPredicted RBP23.91■■□□□ 1.42
PHGDH-202ENST00000369409 NPATQ14207 1427 aa23.9■■□□□ 1.42
PHGDH-202ENST00000369409 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
PHGDH-202ENST00000369409 UGGT1Q9NYU2 1555 aa23.9■■□□□ 1.42
PHGDH-202ENST00000369409 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
PHGDH-202ENST00000369409 KIF1BO60333 1816 aa23.89■■□□□ 1.42
PHGDH-202ENST00000369409 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
PHGDH-202ENST00000369409 SPATA31E1Q6ZUB1 1445 aa23.87■■□□□ 1.41
PHGDH-202ENST00000369409 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
PHGDH-202ENST00000369409 DCAF11Q8TEB1 546 aa23.86■■□□□ 1.41
PHGDH-202ENST00000369409 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
PHGDH-202ENST00000369409 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
PHGDH-202ENST00000369409 MROH2AA6NES4 1674 aa23.84■■□□□ 1.41
PHGDH-202ENST00000369409 KDM2AQ9Y2K7 1162 aa23.84■■□□□ 1.41
PHGDH-202ENST00000369409 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.4
PHGDH-202ENST00000369409 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
PHGDH-202ENST00000369409 CLTCQ00610 1675 aaKnown RBP23.82■■□□□ 1.4
PHGDH-202ENST00000369409 CNTLNQ9NXG0 1405 aa23.81■■□□□ 1.4
PHGDH-202ENST00000369409 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
PHGDH-202ENST00000369409 ARHGAP31Q2M1Z3 1444 aa23.8■■□□□ 1.4
PHGDH-202ENST00000369409 PREX1Q8TCU6 1659 aa23.8■■□□□ 1.4
PHGDH-202ENST00000369409 SYNMO15061 1565 aa23.8■■□□□ 1.4
PHGDH-202ENST00000369409 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
PHGDH-202ENST00000369409 PIK3C2BO00750 1634 aa23.77■■□□□ 1.4
PHGDH-202ENST00000369409 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
PHGDH-202ENST00000369409 EIF4G2P78344 907 aaKnown RBP eCLIP23.77■■□□□ 1.47e-14■■■■■ 63.8
PHGDH-202ENST00000369409 NOS1P29475 1434 aa23.77■■□□□ 1.4
PHGDH-202ENST00000369409 MADDQ8WXG6 1647 aa23.77■■□□□ 1.4
PHGDH-202ENST00000369409 ADGRB3O60242 1522 aa23.76■■□□□ 1.39
PHGDH-202ENST00000369409 MLECQ14165 292 aa23.72■■□□□ 1.39
PHGDH-202ENST00000369409 POLR1AO95602 1720 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-202ENST00000369409 USP47Q96K76 1375 aa23.7■■□□□ 1.38
PHGDH-202ENST00000369409 PPP6R1Q9UPN7 881 aa23.7■■□□□ 1.38
PHGDH-202ENST00000369409 LAMC1P11047 1609 aa23.69■■□□□ 1.38
PHGDH-202ENST00000369409 ROCK2O75116 1388 aaKnown RBP23.69■■□□□ 1.38
PHGDH-202ENST00000369409 PPLO60437 1756 aa23.69■■□□□ 1.38
PHGDH-202ENST00000369409 ERVK-7P63135 1459 aa23.67■■□□□ 1.38
PHGDH-202ENST00000369409 MYOM2P54296 1465 aa23.66■■□□□ 1.38
PHGDH-202ENST00000369409 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
PHGDH-202ENST00000369409 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
PHGDH-202ENST00000369409 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
PHGDH-202ENST00000369409 CHGAP10645 457 aaKnown RBP23.64■■□□□ 1.37
PHGDH-202ENST00000369409 KIAA1210Q9ULL0 1709 aa23.63■■□□□ 1.37
PHGDH-202ENST00000369409 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
PHGDH-202ENST00000369409 SPATA31D1Q6ZQQ2 1576 aa23.62■■□□□ 1.37
PHGDH-202ENST00000369409 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
PHGDH-202ENST00000369409 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
PHGDH-202ENST00000369409 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
PHGDH-202ENST00000369409 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
PHGDH-202ENST00000369409 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
PHGDH-202ENST00000369409 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
PHGDH-202ENST00000369409 MIER1Q8N108 512 aa23.58■■□□□ 1.37
PHGDH-202ENST00000369409 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms