RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
SCNM1-201ENST00000368902 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
SCNM1-201ENST00000368902 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
SCNM1-201ENST00000368902 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 KDM5DQ9BY66 1539 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 GGT6Q6P531 493 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.21
SCNM1-201ENST00000368902 MBD5Q9P267 1494 aa13.7□□□□□ -0.22
SCNM1-201ENST00000368902 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
SCNM1-201ENST00000368902 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
SCNM1-201ENST00000368902 CPS1P31327 1500 aa13.69□□□□□ -0.22
SCNM1-201ENST00000368902 PZPP20742 1482 aa13.68□□□□□ -0.22
SCNM1-201ENST00000368902 CCDC141Q6ZP82 1450 aa13.68□□□□□ -0.22
SCNM1-201ENST00000368902 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
SCNM1-201ENST00000368902 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
SCNM1-201ENST00000368902 TNRQ92752 1358 aa13.67□□□□□ -0.22
SCNM1-201ENST00000368902 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
SCNM1-201ENST00000368902 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
SCNM1-201ENST00000368902 TSPY4P0CV99 314 aa13.64□□□□□ -0.23
SCNM1-201ENST00000368902 TSPY10P0CW01 314 aa13.64□□□□□ -0.23
SCNM1-201ENST00000368902 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
SCNM1-201ENST00000368902 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
SCNM1-201ENST00000368902 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
SCNM1-201ENST00000368902 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
SCNM1-201ENST00000368902 UGGT1Q9NYU2 1555 aa13.61□□□□□ -0.23
SCNM1-201ENST00000368902 DEPDC5O75140 1603 aa13.61□□□□□ -0.23
SCNM1-201ENST00000368902 KIF3BO15066 747 aa13.6□□□□□ -0.23
SCNM1-201ENST00000368902 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
SCNM1-201ENST00000368902 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
SCNM1-201ENST00000368902 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
SCNM1-201ENST00000368902 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
SCNM1-201ENST00000368902 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
SCNM1-201ENST00000368902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCNM1-201ENST00000368902 SYNMO15061 1565 aa13.59□□□□□ -0.23
SCNM1-201ENST00000368902 NPHP4O75161 1426 aaPredicted RBP13.59□□□□□ -0.23
SCNM1-201ENST00000368902 MYOM3Q5VTT5 1437 aa13.59□□□□□ -0.23
SCNM1-201ENST00000368902 HSPA1LP34931 641 aa13.59□□□□□ -0.23
SCNM1-201ENST00000368902 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
SCNM1-201ENST00000368902 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
SCNM1-201ENST00000368902 ABCC3O15438 1527 aa13.58□□□□□ -0.24
SCNM1-201ENST00000368902 ALKQ9UM73 1620 aa13.57□□□□□ -0.24
SCNM1-201ENST00000368902 MED14O60244 1454 aa13.57□□□□□ -0.24
SCNM1-201ENST00000368902 TOM1O60784 492 aa13.57□□□□□ -0.24
SCNM1-201ENST00000368902 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
SCNM1-201ENST00000368902 EIF2AK4Q9P2K8 1649 aaKnown RBP13.56□□□□□ -0.24
SCNM1-201ENST00000368902 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
SCNM1-201ENST00000368902 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
SCNM1-201ENST00000368902 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
SCNM1-201ENST00000368902 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
SCNM1-201ENST00000368902 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
SCNM1-201ENST00000368902 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
SCNM1-201ENST00000368902 FAM50AQ14320 339 aaKnown RBP13.52□□□□□ -0.25
SCNM1-201ENST00000368902 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
SCNM1-201ENST00000368902 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
SCNM1-201ENST00000368902 FGD6Q6ZV73 1430 aa13.51□□□□□ -0.25
SCNM1-201ENST00000368902 CEP152O94986 1710 aa13.5□□□□□ -0.25
SCNM1-201ENST00000368902 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
SCNM1-201ENST00000368902 ABCC5O15440 1437 aa13.49□□□□□ -0.25
SCNM1-201ENST00000368902 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
SCNM1-201ENST00000368902 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
SCNM1-201ENST00000368902 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
SCNM1-201ENST00000368902 CHIC2Q9UKJ5 165 aa13.48□□□□□ -0.25
SCNM1-201ENST00000368902 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.25
SCNM1-201ENST00000368902 SLIT1O75093 1534 aa13.45□□□□□ -0.26
SCNM1-201ENST00000368902 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
SCNM1-201ENST00000368902 ARHGAP23Q9P227 1491 aa13.45□□□□□ -0.26
SCNM1-201ENST00000368902 DAPK1P53355 1430 aa13.44□□□□□ -0.26
SCNM1-201ENST00000368902 PTPN23Q9H3S7 1636 aa13.43□□□□□ -0.26
SCNM1-201ENST00000368902 ANKRD30AQ9BXX3 1397 aa13.43□□□□□ -0.26
SCNM1-201ENST00000368902 KIF15Q9NS87 1388 aa13.43□□□□□ -0.26
SCNM1-201ENST00000368902 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
SCNM1-201ENST00000368902 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
SCNM1-201ENST00000368902 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
SCNM1-201ENST00000368902 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
SCNM1-201ENST00000368902 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
SCNM1-201ENST00000368902 ITGAEP38570 1179 aa13.39□□□□□ -0.27
SCNM1-201ENST00000368902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCNM1-201ENST00000368902 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
SCNM1-201ENST00000368902 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
SCNM1-201ENST00000368902 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
SCNM1-201ENST00000368902 LTKP29376 864 aa13.36□□□□□ -0.27
SCNM1-201ENST00000368902 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
SCNM1-201ENST00000368902 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
SCNM1-201ENST00000368902 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
SCNM1-201ENST00000368902 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
SCNM1-201ENST00000368902 LMTK2Q8IWU2 1503 aa13.34□□□□□ -0.27
SCNM1-201ENST00000368902 KANK1Q14678 1352 aa13.34□□□□□ -0.27
SCNM1-201ENST00000368902 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
SCNM1-201ENST00000368902 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
SCNM1-201ENST00000368902 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
SCNM1-201ENST00000368902 FAM135BQ49AJ0 1406 aa13.33□□□□□ -0.28
SCNM1-201ENST00000368902 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
SCNM1-201ENST00000368902 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
SCNM1-201ENST00000368902 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
SCNM1-201ENST00000368902 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
SCNM1-201ENST00000368902 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
SCNM1-201ENST00000368902 TET3O43151 1660 aa13.29□□□□□ -0.28
SCNM1-201ENST00000368902 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms