RNA–Protein interactions for RNA: ENST00000368638.4

LAMA4-203, Transcript of laminin subunit alpha 4, humanhuman

TSL 2 BASIC

Gene LAMA4, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-203ENST00000368638 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
LAMA4-203ENST00000368638 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
LAMA4-203ENST00000368638 A2ML1A8K2U0 1454 aa23.65■■□□□ 1.38
LAMA4-203ENST00000368638 KIF3BO15066 747 aa23.65■■□□□ 1.38
LAMA4-203ENST00000368638 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
LAMA4-203ENST00000368638 PZPP20742 1482 aa23.64■■□□□ 1.38
LAMA4-203ENST00000368638 IQSEC2Q5JU85 1478 aa23.63■■□□□ 1.37
LAMA4-203ENST00000368638 RNF17Q9BXT8 1623 aaKnown RBP23.63■■□□□ 1.37
LAMA4-203ENST00000368638 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
LAMA4-203ENST00000368638 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
LAMA4-203ENST00000368638 EIF2AK4Q9P2K8 1649 aaKnown RBP23.6■■□□□ 1.37
LAMA4-203ENST00000368638 TNRQ92752 1358 aa23.58■■□□□ 1.37
LAMA4-203ENST00000368638 TSPY4P0CV99 314 aa23.58■■□□□ 1.37
LAMA4-203ENST00000368638 TSPY10P0CW01 314 aa23.58■■□□□ 1.37
LAMA4-203ENST00000368638 PKD2Q13563 968 aa23.58■■□□□ 1.37
LAMA4-203ENST00000368638 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
LAMA4-203ENST00000368638 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
LAMA4-203ENST00000368638 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
LAMA4-203ENST00000368638 POLR1AO95602 1720 aaPredicted RBP23.56■■□□□ 1.36
LAMA4-203ENST00000368638 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
LAMA4-203ENST00000368638 ZNF335Q9H4Z2 1342 aaPredicted RBP23.55■■□□□ 1.36
LAMA4-203ENST00000368638 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
LAMA4-203ENST00000368638 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
LAMA4-203ENST00000368638 ABCC3O15438 1527 aa23.54■■□□□ 1.36
LAMA4-203ENST00000368638 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
LAMA4-203ENST00000368638 SPATA31D1Q6ZQQ2 1576 aa23.5■■□□□ 1.35
LAMA4-203ENST00000368638 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
LAMA4-203ENST00000368638 SHANK2Q9UPX8 1470 aa23.49■■□□□ 1.35
LAMA4-203ENST00000368638 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
LAMA4-203ENST00000368638 CEP152O94986 1710 aa23.48■■□□□ 1.35
LAMA4-203ENST00000368638 UGGT1Q9NYU2 1555 aa23.47■■□□□ 1.35
LAMA4-203ENST00000368638 ABCC5O15440 1437 aa23.46■■□□□ 1.35
LAMA4-203ENST00000368638 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
LAMA4-203ENST00000368638 ERVK-7P63135 1459 aa23.44■■□□□ 1.34
LAMA4-203ENST00000368638 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
LAMA4-203ENST00000368638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
LAMA4-203ENST00000368638 FGD6Q6ZV73 1430 aa23.42■■□□□ 1.34
LAMA4-203ENST00000368638 MED14O60244 1454 aa23.42■■□□□ 1.34
LAMA4-203ENST00000368638 DAPK1P53355 1430 aa23.42■■□□□ 1.34
LAMA4-203ENST00000368638 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
LAMA4-203ENST00000368638 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
LAMA4-203ENST00000368638 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
LAMA4-203ENST00000368638 THEMISQ8N1K5 641 aaPredicted RBP23.38■■□□□ 1.33
LAMA4-203ENST00000368638 CPS1P31327 1500 aa23.38■■□□□ 1.33
LAMA4-203ENST00000368638 UBR1Q8IWV7 1749 aa23.37■■□□□ 1.33
LAMA4-203ENST00000368638 IQGAP1P46940 1657 aa23.36■■□□□ 1.33
LAMA4-203ENST00000368638 NPHP4O75161 1426 aaPredicted RBP23.35■■□□□ 1.33
LAMA4-203ENST00000368638 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
LAMA4-203ENST00000368638 APLP2Q06481 763 aa23.35■■□□□ 1.33
LAMA4-203ENST00000368638 ANKLE2Q86XL3 938 aa23.35■■□□□ 1.33
LAMA4-203ENST00000368638 RRP7BPQ9NSQ0 103 aa23.33■■□□□ 1.33
LAMA4-203ENST00000368638 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
LAMA4-203ENST00000368638 CFAP65Q6ZU64 1925 aaKnown RBP23.31■■□□□ 1.32
LAMA4-203ENST00000368638 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
LAMA4-203ENST00000368638 LMTK2Q8IWU2 1503 aa23.29■■□□□ 1.32
LAMA4-203ENST00000368638 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
LAMA4-203ENST00000368638 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
LAMA4-203ENST00000368638 ARHGAP23Q9P227 1491 aa23.28■■□□□ 1.32
LAMA4-203ENST00000368638 SLIT1O75093 1534 aa23.27■■□□□ 1.32
LAMA4-203ENST00000368638 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.31
LAMA4-203ENST00000368638 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
LAMA4-203ENST00000368638 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
LAMA4-203ENST00000368638 ILDR2Q71H61 639 aa23.24■■□□□ 1.31
LAMA4-203ENST00000368638 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
LAMA4-203ENST00000368638 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
LAMA4-203ENST00000368638 SYNMO15061 1565 aa23.23■■□□□ 1.31
LAMA4-203ENST00000368638 KDM5AP29375 1690 aaKnown RBP23.22■■□□□ 1.31
LAMA4-203ENST00000368638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
LAMA4-203ENST00000368638 KANK1Q14678 1352 aa23.21■■□□□ 1.31
LAMA4-203ENST00000368638 EFCAB6Q5THR3 1501 aa23.21■■□□□ 1.31
LAMA4-203ENST00000368638 LRRC7Q96NW7 1537 aa23.19■■□□□ 1.3
LAMA4-203ENST00000368638 LTKP29376 864 aa23.17■■□□□ 1.3
LAMA4-203ENST00000368638 NOS1P29475 1434 aa23.16■■□□□ 1.3
LAMA4-203ENST00000368638 TOM1O60784 492 aa23.15■■□□□ 1.3
LAMA4-203ENST00000368638 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
LAMA4-203ENST00000368638 PIP4K2BP78356 416 aa23.12■■□□□ 1.29
LAMA4-203ENST00000368638 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
LAMA4-203ENST00000368638 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
LAMA4-203ENST00000368638 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
LAMA4-203ENST00000368638 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
LAMA4-203ENST00000368638 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
LAMA4-203ENST00000368638 HSPA1LP34931 641 aa23.11■■□□□ 1.29
LAMA4-203ENST00000368638 IDI1Q13907 227 aa23.1■■□□□ 1.29
LAMA4-203ENST00000368638 UNC13BO14795 1591 aa23.1■■□□□ 1.29
LAMA4-203ENST00000368638 TET3O43151 1660 aa23.09■■□□□ 1.29
LAMA4-203ENST00000368638 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
LAMA4-203ENST00000368638 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
LAMA4-203ENST00000368638 MED1Q15648 1581 aaPredicted RBP23.06■■□□□ 1.28
LAMA4-203ENST00000368638 EID1Q9Y6B2 187 aa23.06■■□□□ 1.28
LAMA4-203ENST00000368638 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
LAMA4-203ENST00000368638 SOCS7O14512 581 aa23.05■■□□□ 1.28
LAMA4-203ENST00000368638 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
LAMA4-203ENST00000368638 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
LAMA4-203ENST00000368638 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
LAMA4-203ENST00000368638 E9PCH4 1651 aa23■■□□□ 1.27
LAMA4-203ENST00000368638 SLC52A1Q9NWF4 448 aa23■■□□□ 1.27
LAMA4-203ENST00000368638 NWD1Q149M9 1564 aa23■■□□□ 1.27
LAMA4-203ENST00000368638 TMEM131LA2VDJ0 1609 aa22.99■■□□□ 1.27
LAMA4-203ENST00000368638 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
LAMA4-203ENST00000368638 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms