RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
TPM3-210ENST00000368530 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
TPM3-210ENST00000368530 FBXO31Q5XUX0 539 aaPredicted RBP15.59■□□□□ 0.09
TPM3-210ENST00000368530 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
TPM3-210ENST00000368530 KIF3BO15066 747 aa15.58■□□□□ 0.08
TPM3-210ENST00000368530 A2ML1A8K2U0 1454 aa15.57■□□□□ 0.08
TPM3-210ENST00000368530 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
TPM3-210ENST00000368530 DNMT1P26358 1616 aaKnown RBP15.56■□□□□ 0.08
TPM3-210ENST00000368530 CCDC141Q6ZP82 1450 aa15.56■□□□□ 0.08
TPM3-210ENST00000368530 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
TPM3-210ENST00000368530 SOCS7O14512 581 aa15.54■□□□□ 0.08
TPM3-210ENST00000368530 TNRQ92752 1358 aa15.54■□□□□ 0.08
TPM3-210ENST00000368530 PZPP20742 1482 aa15.53■□□□□ 0.08
TPM3-210ENST00000368530 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
TPM3-210ENST00000368530 WASHC2CQ9Y4E1 1318 aa15.51■□□□□ 0.07
TPM3-210ENST00000368530 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
TPM3-210ENST00000368530 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
TPM3-210ENST00000368530 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
TPM3-210ENST00000368530 NEURL4Q96JN8 1562 aa15.51■□□□□ 0.07
TPM3-210ENST00000368530 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
TPM3-210ENST00000368530 ARHGEF5Q12774 1597 aa15.5■□□□□ 0.07
TPM3-210ENST00000368530 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
TPM3-210ENST00000368530 TSPY4P0CV99 314 aa15.48■□□□□ 0.07
TPM3-210ENST00000368530 TSPY10P0CW01 314 aa15.48■□□□□ 0.07
TPM3-210ENST00000368530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■■□□□ 11.8
TPM3-210ENST00000368530 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
TPM3-210ENST00000368530 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
TPM3-210ENST00000368530 KCNA4P22459 653 aa15.46■□□□□ 0.07
TPM3-210ENST00000368530 ANKLE2Q86XL3 938 aa15.46■□□□□ 0.07
TPM3-210ENST00000368530 NLRP1Q9C000 1473 aa15.46■□□□□ 0.07
TPM3-210ENST00000368530 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
TPM3-210ENST00000368530 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
TPM3-210ENST00000368530 MED14O60244 1454 aa15.45■□□□□ 0.06
TPM3-210ENST00000368530 CPS1P31327 1500 aa15.43■□□□□ 0.06
TPM3-210ENST00000368530 VWDEQ8N2E2 1590 aa15.43■□□□□ 0.06
TPM3-210ENST00000368530 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
TPM3-210ENST00000368530 POLR1AO95602 1720 aaPredicted RBP15.43■□□□□ 0.06
TPM3-210ENST00000368530 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
TPM3-210ENST00000368530 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
TPM3-210ENST00000368530 ABCC3O15438 1527 aa15.42■□□□□ 0.06
TPM3-210ENST00000368530 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
TPM3-210ENST00000368530 HSPA1LP34931 641 aa15.41■□□□□ 0.06
TPM3-210ENST00000368530 PPARGC1BQ86YN6 1023 aaKnown RBP15.41■□□□□ 0.06
TPM3-210ENST00000368530 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
TPM3-210ENST00000368530 MAP3K1Q13233 1512 aa15.41■□□□□ 0.06
TPM3-210ENST00000368530 DEPDC5O75140 1603 aa15.4■□□□□ 0.06
TPM3-210ENST00000368530 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
TPM3-210ENST00000368530 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
TPM3-210ENST00000368530 TOM1O60784 492 aa15.39■□□□□ 0.05
TPM3-210ENST00000368530 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
TPM3-210ENST00000368530 PIP4K2BP78356 416 aa15.38■□□□□ 0.05
TPM3-210ENST00000368530 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
TPM3-210ENST00000368530 ERVK-7P63135 1459 aa15.38■□□□□ 0.05
TPM3-210ENST00000368530 EIF2AK4Q9P2K8 1649 aaKnown RBP15.36■□□□□ 0.05
TPM3-210ENST00000368530 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
TPM3-210ENST00000368530 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
TPM3-210ENST00000368530 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
TPM3-210ENST00000368530 DUOX2Q9NRD8 1548 aa15.34■□□□□ 0.05
TPM3-210ENST00000368530 ABCC5O15440 1437 aa15.34■□□□□ 0.05
TPM3-210ENST00000368530 LTKP29376 864 aa15.33■□□□□ 0.05
TPM3-210ENST00000368530 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
TPM3-210ENST00000368530 IQGAP1P46940 1657 aa15.33■□□□□ 0.04
TPM3-210ENST00000368530 ARHGAP31Q2M1Z3 1444 aa15.33■□□□□ 0.04
TPM3-210ENST00000368530 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
TPM3-210ENST00000368530 ARHGAP23Q9P227 1491 aa15.31■□□□□ 0.04
TPM3-210ENST00000368530 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
TPM3-210ENST00000368530 MED1Q15648 1581 aaPredicted RBP15.3■□□□□ 0.04
TPM3-210ENST00000368530 UBR1Q8IWV7 1749 aa15.3■□□□□ 0.04
TPM3-210ENST00000368530 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
TPM3-210ENST00000368530 CEP152O94986 1710 aa15.29■□□□□ 0.04
TPM3-210ENST00000368530 PRDM15P57071 1507 aaPredicted RBP15.29■□□□□ 0.04
TPM3-210ENST00000368530 SLIT1O75093 1534 aa15.29■□□□□ 0.04
TPM3-210ENST00000368530 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
TPM3-210ENST00000368530 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
TPM3-210ENST00000368530 TXNDC2Q86VQ3 553 aa15.27■□□□□ 0.04
TPM3-210ENST00000368530 DAPK1P53355 1430 aa15.26■□□□□ 0.03
TPM3-210ENST00000368530 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
TPM3-210ENST00000368530 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
TPM3-210ENST00000368530 CROCC2H7BZ55 1655 aa15.24■□□□□ 0.03
TPM3-210ENST00000368530 SYNMO15061 1565 aa15.24■□□□□ 0.03
TPM3-210ENST00000368530 TMEM2Q9UHN6 1383 aa15.24■□□□□ 0.03
TPM3-210ENST00000368530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.031e-11■■■■■ 30.9
TPM3-210ENST00000368530 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
TPM3-210ENST00000368530 IDI1Q13907 227 aa15.23■□□□□ 0.03
TPM3-210ENST00000368530 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
TPM3-210ENST00000368530 LMTK2Q8IWU2 1503 aa15.22■□□□□ 0.03
TPM3-210ENST00000368530 PIK3C2BO00750 1634 aa15.21■□□□□ 0.03
TPM3-210ENST00000368530 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
TPM3-210ENST00000368530 EID1Q9Y6B2 187 aa15.21■□□□□ 0.03
TPM3-210ENST00000368530 NOS1P29475 1434 aa15.19■□□□□ 0.02
TPM3-210ENST00000368530 XIRP1Q702N8 1843 aaKnown RBP15.19■□□□□ 0.02
TPM3-210ENST00000368530 APLP2Q06481 763 aa15.19■□□□□ 0.02
TPM3-210ENST00000368530 KANK1Q14678 1352 aa15.19■□□□□ 0.02
TPM3-210ENST00000368530 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
TPM3-210ENST00000368530 TET3O43151 1660 aa15.18■□□□□ 0.02
TPM3-210ENST00000368530 RGS17Q9UGC6 210 aaPredicted RBP15.17■□□□□ 0.02
TPM3-210ENST00000368530 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
TPM3-210ENST00000368530 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
TPM3-210ENST00000368530 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
TPM3-210ENST00000368530 KCNA6P17658 529 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms