RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 RTEL1-TNFRSF6BF6WH68 1400 aa14.07□□□□□ -0.16
TPM3-209ENST00000368527 MAGI2Q86UL8 1455 aa14.06□□□□□ -0.16
TPM3-209ENST00000368527 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
TPM3-209ENST00000368527 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
TPM3-209ENST00000368527 ZCCHC11Q5TAX3 1644 aaKnown RBP14.04□□□□□ -0.16
TPM3-209ENST00000368527 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
TPM3-209ENST00000368527 LAMC1P11047 1609 aa14.04□□□□□ -0.16
TPM3-209ENST00000368527 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
TPM3-209ENST00000368527 ABCC1P33527 1531 aa14.02□□□□□ -0.16
TPM3-209ENST00000368527 MYT1Q01538 1121 aa14.02□□□□□ -0.17
TPM3-209ENST00000368527 WDR7Q9Y4E6 1490 aa14.01□□□□□ -0.17
TPM3-209ENST00000368527 HNRNPUQ00839 825 aaKnown RBP eCLIP14□□□□□ -0.17
TPM3-209ENST00000368527 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
TPM3-209ENST00000368527 GPRASP1Q5JY77 1395 aa13.99□□□□□ -0.17
TPM3-209ENST00000368527 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
TPM3-209ENST00000368527 ERCC6L2Q5T890 1561 aa13.99□□□□□ -0.17
TPM3-209ENST00000368527 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
TPM3-209ENST00000368527 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
TPM3-209ENST00000368527 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
TPM3-209ENST00000368527 FKBP8Q14318 412 aa13.97□□□□□ -0.17
TPM3-209ENST00000368527 MRS2Q9HD23 443 aa13.97□□□□□ -0.17
TPM3-209ENST00000368527 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.17
TPM3-209ENST00000368527 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
TPM3-209ENST00000368527 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
TPM3-209ENST00000368527 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
TPM3-209ENST00000368527 RALBP1Q15311 655 aa13.94□□□□□ -0.18
TPM3-209ENST00000368527 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
TPM3-209ENST00000368527 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
TPM3-209ENST00000368527 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
TPM3-209ENST00000368527 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
TPM3-209ENST00000368527 KANK1Q14678 1352 aa13.93□□□□□ -0.18
TPM3-209ENST00000368527 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
TPM3-209ENST00000368527 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
TPM3-209ENST00000368527 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
TPM3-209ENST00000368527 ADRA2BP18089 450 aa13.92□□□□□ -0.18
TPM3-209ENST00000368527 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
TPM3-209ENST00000368527 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
TPM3-209ENST00000368527 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
TPM3-209ENST00000368527 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
TPM3-209ENST00000368527 A2MP01023 1474 aa13.9□□□□□ -0.18
TPM3-209ENST00000368527 TRPM2O94759 1503 aa13.9□□□□□ -0.19
TPM3-209ENST00000368527 INSRP06213 1382 aa13.89□□□□□ -0.19
TPM3-209ENST00000368527 PTPRTO14522 1441 aa13.89□□□□□ -0.19
TPM3-209ENST00000368527 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
TPM3-209ENST00000368527 E9PCH4 1651 aa13.88□□□□□ -0.19
TPM3-209ENST00000368527 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
TPM3-209ENST00000368527 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
TPM3-209ENST00000368527 FANCAO15360 1455 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 ZMYM4Q5VZL5 1548 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.194e-19■■■■■ 36
TPM3-209ENST00000368527 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 TET3O43151 1660 aa13.87□□□□□ -0.19
TPM3-209ENST00000368527 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
TPM3-209ENST00000368527 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
TPM3-209ENST00000368527 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
TPM3-209ENST00000368527 VWDEQ8N2E2 1590 aa13.86□□□□□ -0.19
TPM3-209ENST00000368527 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
TPM3-209ENST00000368527 SMG6Q86US8 1419 aaKnown RBP13.85□□□□□ -0.19
TPM3-209ENST00000368527 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
TPM3-209ENST00000368527 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
TPM3-209ENST00000368527 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
TPM3-209ENST00000368527 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
TPM3-209ENST00000368527 TMF1P82094 1093 aa13.83□□□□□ -0.2
TPM3-209ENST00000368527 CEP152O94986 1710 aa13.82□□□□□ -0.2
TPM3-209ENST00000368527 SPHKAPQ2M3C7 1700 aa13.82□□□□□ -0.2
TPM3-209ENST00000368527 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM3-209ENST00000368527 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
TPM3-209ENST00000368527 PPP4R2Q9NY27 417 aa13.82□□□□□ -0.2
TPM3-209ENST00000368527 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
TPM3-209ENST00000368527 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
TPM3-209ENST00000368527 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
TPM3-209ENST00000368527 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
TPM3-209ENST00000368527 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
TPM3-209ENST00000368527 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
TPM3-209ENST00000368527 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
TPM3-209ENST00000368527 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
TPM3-209ENST00000368527 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
TPM3-209ENST00000368527 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
TPM3-209ENST00000368527 PARD3Q8TEW0 1356 aa13.8□□□□□ -0.2
TPM3-209ENST00000368527 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
TPM3-209ENST00000368527 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
TPM3-209ENST00000368527 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
TPM3-209ENST00000368527 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
TPM3-209ENST00000368527 MYOM2P54296 1465 aa13.78□□□□□ -0.2
TPM3-209ENST00000368527 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
TPM3-209ENST00000368527 BCANQ96GW7 911 aa13.77□□□□□ -0.21
TPM3-209ENST00000368527 TESK2Q96S53 571 aa13.77□□□□□ -0.21
TPM3-209ENST00000368527 IQGAP1P46940 1657 aa13.76□□□□□ -0.21
TPM3-209ENST00000368527 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
TPM3-209ENST00000368527 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
TPM3-209ENST00000368527 NPC1L1Q9UHC9 1359 aa13.73□□□□□ -0.21
TPM3-209ENST00000368527 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
TPM3-209ENST00000368527 NEO1Q92859 1461 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms