RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 MIA2Q96PC5 1412 aa27.71■■■□□ 2.03
C1orf43-204ENST00000368518 CEP170BQ9Y4F5 1589 aaPredicted RBP27.71■■■□□ 2.03
C1orf43-204ENST00000368518 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
C1orf43-204ENST00000368518 FBXO31Q5XUX0 539 aaPredicted RBP27.7■■■□□ 2.02
C1orf43-204ENST00000368518 KDM5DQ9BY66 1539 aa27.7■■■□□ 2.02
C1orf43-204ENST00000368518 MAST1Q9Y2H9 1570 aa27.68■■■□□ 2.02
C1orf43-204ENST00000368518 TNRQ92752 1358 aa27.63■■■□□ 2.01
C1orf43-204ENST00000368518 A2ML1A8K2U0 1454 aa27.63■■■□□ 2.01
C1orf43-204ENST00000368518 PZPP20742 1482 aa27.63■■■□□ 2.01
C1orf43-204ENST00000368518 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
C1orf43-204ENST00000368518 PKD2Q13563 968 aa27.61■■■□□ 2.01
C1orf43-204ENST00000368518 PLA2R1Q13018 1463 aa27.61■■■□□ 2.01
C1orf43-204ENST00000368518 DNMT1P26358 1616 aaKnown RBP27.59■■■□□ 2.01
C1orf43-204ENST00000368518 LTBP4Q8N2S1 1624 aa27.59■■■□□ 2.01
C1orf43-204ENST00000368518 PTPN23Q9H3S7 1636 aa27.59■■■□□ 2.01
C1orf43-204ENST00000368518 RNF17Q9BXT8 1623 aaKnown RBP27.58■■■□□ 2.01
C1orf43-204ENST00000368518 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
C1orf43-204ENST00000368518 ABCC5O15440 1437 aa27.56■■■□□ 2
C1orf43-204ENST00000368518 EIF2AK4Q9P2K8 1649 aaKnown RBP27.56■■■□□ 2
C1orf43-204ENST00000368518 ZNF335Q9H4Z2 1342 aaPredicted RBP27.55■■■□□ 2
C1orf43-204ENST00000368518 ABCC3O15438 1527 aa27.54■■■□□ 2
C1orf43-204ENST00000368518 DUOX2Q9NRD8 1548 aa27.54■■■□□ 2
C1orf43-204ENST00000368518 RRP7BPQ9NSQ0 103 aa27.54■■■□□ 2
C1orf43-204ENST00000368518 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
C1orf43-204ENST00000368518 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
C1orf43-204ENST00000368518 KIF15Q9NS87 1388 aa27.52■■■□□ 2
C1orf43-204ENST00000368518 ZC3H13Q5T200 1668 aaKnown RBP27.5■■□□□ 1.99
C1orf43-204ENST00000368518 MROH1Q8NDA8 1641 aa27.5■■□□□ 1.99
C1orf43-204ENST00000368518 SHANK2Q9UPX8 1470 aa27.5■■□□□ 1.99
C1orf43-204ENST00000368518 DAPK1P53355 1430 aa27.5■■□□□ 1.99
C1orf43-204ENST00000368518 CEP152O94986 1710 aa27.48■■□□□ 1.99
C1orf43-204ENST00000368518 CHIC2Q9UKJ5 165 aa27.48■■□□□ 1.99
C1orf43-204ENST00000368518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.48■■□□□ 1.99
C1orf43-204ENST00000368518 NLRP1Q9C000 1473 aa27.46■■□□□ 1.99
C1orf43-204ENST00000368518 POLR1AO95602 1720 aaPredicted RBP27.45■■□□□ 1.99
C1orf43-204ENST00000368518 THEMISQ8N1K5 641 aaPredicted RBP27.45■■□□□ 1.98
C1orf43-204ENST00000368518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.45■■□□□ 1.98
C1orf43-204ENST00000368518 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
C1orf43-204ENST00000368518 CFAP65Q6ZU64 1925 aaKnown RBP27.43■■□□□ 1.98
C1orf43-204ENST00000368518 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
C1orf43-204ENST00000368518 ERBINQ96RT1 1412 aa27.42■■□□□ 1.98
C1orf43-204ENST00000368518 ERVK-7P63135 1459 aa27.42■■□□□ 1.98
C1orf43-204ENST00000368518 IQSEC2Q5JU85 1478 aa27.42■■□□□ 1.98
C1orf43-204ENST00000368518 SPATA31D1Q6ZQQ2 1576 aa27.42■■□□□ 1.98
C1orf43-204ENST00000368518 NEURL4Q96JN8 1562 aa27.42■■□□□ 1.98
C1orf43-204ENST00000368518 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
C1orf43-204ENST00000368518 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
C1orf43-204ENST00000368518 PRDM15P57071 1507 aaPredicted RBP27.38■■□□□ 1.97
C1orf43-204ENST00000368518 UBAP1LF5GYI3 381 aa27.35■■□□□ 1.97
C1orf43-204ENST00000368518 KANK1Q14678 1352 aa27.33■■□□□ 1.97
C1orf43-204ENST00000368518 NPHP4O75161 1426 aaPredicted RBP27.33■■□□□ 1.96
C1orf43-204ENST00000368518 DEPDC5O75140 1603 aa27.32■■□□□ 1.96
C1orf43-204ENST00000368518 ARHGAP31Q2M1Z3 1444 aa27.29■■□□□ 1.96
C1orf43-204ENST00000368518 UBR1Q8IWV7 1749 aa27.28■■□□□ 1.96
C1orf43-204ENST00000368518 MED14O60244 1454 aa27.28■■□□□ 1.96
C1orf43-204ENST00000368518 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
C1orf43-204ENST00000368518 VWDEQ8N2E2 1590 aa27.25■■□□□ 1.95
C1orf43-204ENST00000368518 ADGRL2O95490 1459 aa27.25■■□□□ 1.95
C1orf43-204ENST00000368518 CPS1P31327 1500 aa27.24■■□□□ 1.95
C1orf43-204ENST00000368518 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
C1orf43-204ENST00000368518 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
C1orf43-204ENST00000368518 STAG3Q9UJ98 1225 aa27.2■■□□□ 1.94
C1orf43-204ENST00000368518 DISP3Q9P2K9 1392 aa27.2■■□□□ 1.94
C1orf43-204ENST00000368518 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
C1orf43-204ENST00000368518 SCAF1Q9H7N4 1312 aaKnown RBP27.19■■□□□ 1.94
C1orf43-204ENST00000368518 LTKP29376 864 aa27.19■■□□□ 1.94
C1orf43-204ENST00000368518 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
C1orf43-204ENST00000368518 ANKRD50Q9ULJ7 1429 aa27.18■■□□□ 1.94
C1orf43-204ENST00000368518 SCAF11Q99590 1463 aaKnown RBP27.18■■□□□ 1.94
C1orf43-204ENST00000368518 PIP4K2BP78356 416 aa27.17■■□□□ 1.94
C1orf43-204ENST00000368518 SLIT1O75093 1534 aa27.15■■□□□ 1.94
C1orf43-204ENST00000368518 EFCAB6Q5THR3 1501 aa27.15■■□□□ 1.94
C1orf43-204ENST00000368518 ARHGAP23Q9P227 1491 aa27.14■■□□□ 1.94
C1orf43-204ENST00000368518 IDI1Q13907 227 aa27.14■■□□□ 1.94
C1orf43-204ENST00000368518 EID1Q9Y6B2 187 aa27.14■■□□□ 1.94
C1orf43-204ENST00000368518 STRCP1A6NGW2 1772 aa27.13■■□□□ 1.93
C1orf43-204ENST00000368518 SYNMO15061 1565 aa27.13■■□□□ 1.93
C1orf43-204ENST00000368518 TOM1O60784 492 aa27.12■■□□□ 1.93
C1orf43-204ENST00000368518 ITGAEP38570 1179 aa27.12■■□□□ 1.93
C1orf43-204ENST00000368518 TMEM2Q9UHN6 1383 aa27.1■■□□□ 1.93
C1orf43-204ENST00000368518 NOS1P29475 1434 aa27.08■■□□□ 1.93
C1orf43-204ENST00000368518 LRRC7Q96NW7 1537 aa27.06■■□□□ 1.92
C1orf43-204ENST00000368518 HSPA1LP34931 641 aa27.04■■□□□ 1.92
C1orf43-204ENST00000368518 ILDR2Q71H61 639 aa27.04■■□□□ 1.92
C1orf43-204ENST00000368518 KDM5AP29375 1690 aaKnown RBP27.04■■□□□ 1.92
C1orf43-204ENST00000368518 TET3O43151 1660 aa27.03■■□□□ 1.92
C1orf43-204ENST00000368518 ROCK1Q13464 1354 aa27.03■■□□□ 1.92
C1orf43-204ENST00000368518 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
C1orf43-204ENST00000368518 ADGRB3O60242 1522 aa27.02■■□□□ 1.92
C1orf43-204ENST00000368518 UNC13BO14795 1591 aa27.01■■□□□ 1.92
C1orf43-204ENST00000368518 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
C1orf43-204ENST00000368518 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
C1orf43-204ENST00000368518 ALKQ9UM73 1620 aa26.99■■□□□ 1.91
C1orf43-204ENST00000368518 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
C1orf43-204ENST00000368518 BCANQ96GW7 911 aa26.97■■□□□ 1.91
C1orf43-204ENST00000368518 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
C1orf43-204ENST00000368518 MYO5BQ9ULV0 1848 aa26.94■■□□□ 1.9
C1orf43-204ENST00000368518 E9PCH4 1651 aa26.93■■□□□ 1.9
C1orf43-204ENST00000368518 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
C1orf43-204ENST00000368518 NUP155O75694 1391 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms