RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 MAGI2Q86UL8 1455 aa38.14■■■■□ 3.7
EFNA1-202ENST00000368407 DIP2CQ9Y2E4 1556 aa38.11■■■■□ 3.69
EFNA1-202ENST00000368407 DHX29Q7Z478 1369 aaKnown RBP38.07■■■■□ 3.69
EFNA1-202ENST00000368407 A2MP01023 1474 aa38.07■■■■□ 3.68
EFNA1-202ENST00000368407 ERBINQ96RT1 1412 aa38.05■■■■□ 3.68
EFNA1-202ENST00000368407 ARHGEF40Q8TER5 1519 aa38■■■■□ 3.67
EFNA1-202ENST00000368407 ATP10AO60312 1499 aa37.99■■■■□ 3.67
EFNA1-202ENST00000368407 TRIM52Q96A61 297 aa37.95■■■■□ 3.66
EFNA1-202ENST00000368407 KIF3BO15066 747 aa37.94■■■■□ 3.66
EFNA1-202ENST00000368407 EIF2AK4Q9P2K8 1649 aaKnown RBP37.87■■■■□ 3.65
EFNA1-202ENST00000368407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.87■■■■□ 3.653e-18■■□□□ 11.6
EFNA1-202ENST00000368407 REREQ9P2R6 1566 aa37.86■■■■□ 3.65
EFNA1-202ENST00000368407 NUP155O75694 1391 aa37.85■■■■□ 3.65
EFNA1-202ENST00000368407 SIGLEC1Q9BZZ2 1709 aa37.84■■■■□ 3.65
EFNA1-202ENST00000368407 UNC13BO14795 1591 aa37.82■■■■□ 3.65
EFNA1-202ENST00000368407 GGT6Q6P531 493 aa37.79■■■■□ 3.64
EFNA1-202ENST00000368407 DEPDC5O75140 1603 aa37.78■■■■□ 3.64
EFNA1-202ENST00000368407 BCORL1Q5H9F3 1711 aa37.77■■■■□ 3.64
EFNA1-202ENST00000368407 AGLP35573 1532 aa37.77■■■■□ 3.64
EFNA1-202ENST00000368407 PZPP20742 1482 aa37.77■■■■□ 3.64
EFNA1-202ENST00000368407 MROH1Q8NDA8 1641 aa37.77■■■■□ 3.64
EFNA1-202ENST00000368407 KDM5DQ9BY66 1539 aa37.75■■■■□ 3.63
EFNA1-202ENST00000368407 RNF17Q9BXT8 1623 aaKnown RBP37.75■■■■□ 3.63
EFNA1-202ENST00000368407 MPHOSPH9Q99550 1183 aa37.75■■■■□ 3.63
EFNA1-202ENST00000368407 SLC4A1APQ9BWU0 796 aaKnown RBP37.73■■■■□ 3.63
EFNA1-202ENST00000368407 PRDM15P57071 1507 aaPredicted RBP37.72■■■■□ 3.63
EFNA1-202ENST00000368407 FAM135AQ9P2D6 1515 aa37.71■■■■□ 3.63
EFNA1-202ENST00000368407 ARID4BQ4LE39 1312 aaPredicted RBP37.71■■■■□ 3.63
EFNA1-202ENST00000368407 MLECQ14165 292 aa37.67■■■■□ 3.62
EFNA1-202ENST00000368407 IQGAP3Q86VI3 1631 aa37.67■■■■□ 3.62
EFNA1-202ENST00000368407 KANK1Q14678 1352 aa37.66■■■■□ 3.62
EFNA1-202ENST00000368407 VWDEQ8N2E2 1590 aa37.66■■■■□ 3.62
EFNA1-202ENST00000368407 FOXD1Q16676 465 aa37.63■■■■□ 3.62
EFNA1-202ENST00000368407 PKD2Q13563 968 aa37.61■■■■□ 3.61
EFNA1-202ENST00000368407 SUPT16HQ9Y5B9 1047 aaKnown RBP37.59■■■■□ 3.61
EFNA1-202ENST00000368407 WASHC2CQ9Y4E1 1318 aa37.58■■■■□ 3.61
EFNA1-202ENST00000368407 ABCC3O15438 1527 aa37.55■■■■□ 3.6
EFNA1-202ENST00000368407 CEP152O94986 1710 aa37.52■■■■□ 3.6
EFNA1-202ENST00000368407 LMTK2Q8IWU2 1503 aa37.52■■■■□ 3.6
EFNA1-202ENST00000368407 TIMELESSQ9UNS1 1208 aa37.51■■■■□ 3.59
EFNA1-202ENST00000368407 PPP6R1Q9UPN7 881 aa37.49■■■■□ 3.59
EFNA1-202ENST00000368407 TET3O43151 1660 aa37.48■■■■□ 3.59
EFNA1-202ENST00000368407 EFCAB6Q5THR3 1501 aa37.45■■■■□ 3.58
EFNA1-202ENST00000368407 ZC3H13Q5T200 1668 aaKnown RBP37.43■■■■□ 3.58
EFNA1-202ENST00000368407 E9PCH4 1651 aa37.42■■■■□ 3.58
EFNA1-202ENST00000368407 ANKRD30BQ9BXX2 1392 aa37.42■■■■□ 3.58
EFNA1-202ENST00000368407 CAMSAP1Q5T5Y3 1602 aa37.4■■■■□ 3.58
EFNA1-202ENST00000368407 NPATQ14207 1427 aa37.39■■■■□ 3.58
EFNA1-202ENST00000368407 CLTCQ00610 1675 aaKnown RBP37.38■■■■□ 3.58
EFNA1-202ENST00000368407 SIN3AQ96ST3 1273 aa37.38■■■■□ 3.57
EFNA1-202ENST00000368407 ESF1Q9H501 851 aaKnown RBP37.38■■■■□ 3.57
EFNA1-202ENST00000368407 PLA2R1Q13018 1463 aa37.34■■■■□ 3.57
EFNA1-202ENST00000368407 ARHGAP31Q2M1Z3 1444 aa37.32■■■■□ 3.57
EFNA1-202ENST00000368407 RPRD2Q5VT52 1461 aaKnown RBP37.3■■■■□ 3.56
EFNA1-202ENST00000368407 ZMYM3Q14202 1370 aa37.29■■■■□ 3.56
EFNA1-202ENST00000368407 CNTLNQ9NXG0 1405 aa37.28■■■■□ 3.56
EFNA1-202ENST00000368407 PTPRTO14522 1441 aa37.27■■■■□ 3.56
EFNA1-202ENST00000368407 FER1L4A9Z1Z3 1794 aa37.25■■■■□ 3.55
EFNA1-202ENST00000368407 FBXO31Q5XUX0 539 aaPredicted RBP37.24■■■■□ 3.55
EFNA1-202ENST00000368407 MADDQ8WXG6 1647 aa37.24■■■■□ 3.55
EFNA1-202ENST00000368407 CFAP65Q6ZU64 1925 aaKnown RBP37.22■■■■□ 3.55
EFNA1-202ENST00000368407 ADAMTSL3P82987 1691 aa37.22■■■■□ 3.55
EFNA1-202ENST00000368407 SPHKAPQ2M3C7 1700 aa37.21■■■■□ 3.55
EFNA1-202ENST00000368407 TRPM2O94759 1503 aa37.2■■■■□ 3.54
EFNA1-202ENST00000368407 NOS1P29475 1434 aa37.19■■■■□ 3.54
EFNA1-202ENST00000368407 CCDC144AA2RUR9 1427 aa37.18■■■■□ 3.54
EFNA1-202ENST00000368407 CEBPAP49715 358 aaPredicted RBP37.18■■■■□ 3.54
EFNA1-202ENST00000368407 MROH2AA6NES4 1674 aa37.17■■■■□ 3.54
EFNA1-202ENST00000368407 ERVK-7P63135 1459 aa37.16■■■■□ 3.54
EFNA1-202ENST00000368407 UGGT1Q9NYU2 1555 aa37.15■■■■□ 3.54
EFNA1-202ENST00000368407 PREX1Q8TCU6 1659 aa37.14■■■■□ 3.54
EFNA1-202ENST00000368407 RIMS1Q86UR5 1692 aaKnown RBP37.13■■■■□ 3.53
EFNA1-202ENST00000368407 PLPPR3Q6T4P5 718 aa37.12■■■■□ 3.53
EFNA1-202ENST00000368407 SYNMO15061 1565 aa37.12■■■■□ 3.53
EFNA1-202ENST00000368407 TSHZ2Q9NRE2 1034 aa37.11■■■■□ 3.53
EFNA1-202ENST00000368407 CCER2I3L3R5 266 aa37.1■■■■□ 3.53
EFNA1-202ENST00000368407 CLTCL1P53675 1640 aa37.09■■■■□ 3.53
EFNA1-202ENST00000368407 C3P01024 1663 aa37.09■■■■□ 3.53
EFNA1-202ENST00000368407 SPATA31D1Q6ZQQ2 1576 aa37.08■■■■□ 3.53
EFNA1-202ENST00000368407 PPP1R15AO75807 674 aaPredicted RBP37.08■■■■□ 3.53
EFNA1-202ENST00000368407 IDI1Q13907 227 aa37.01■■■■□ 3.52
EFNA1-202ENST00000368407 TONSLQ96HA7 1378 aa37.01■■■■□ 3.52
EFNA1-202ENST00000368407 SLC52A1Q9NWF4 448 aa36.99■■■■□ 3.51
EFNA1-202ENST00000368407 TNRQ92752 1358 aa36.99■■■■□ 3.51
EFNA1-202ENST00000368407 PIK3C2BO00750 1634 aa36.99■■■■□ 3.51
EFNA1-202ENST00000368407 KDM4FA0A1W2PPD8 638 aa36.97■■■■□ 3.51
EFNA1-202ENST00000368407 PTPRMP28827 1452 aa36.96■■■■□ 3.51
EFNA1-202ENST00000368407 RGL3Q3MIN7 710 aa36.96■■■■□ 3.51
EFNA1-202ENST00000368407 L3MBTL2Q969R5 705 aa36.95■■■■□ 3.51
EFNA1-202ENST00000368407 SPATA31E1Q6ZUB1 1445 aa36.95■■■■□ 3.51
EFNA1-202ENST00000368407 CHGAP10645 457 aaKnown RBP36.93■■■■□ 3.5
EFNA1-202ENST00000368407 DDX10Q13206 875 aaKnown RBP36.88■■■■□ 3.49
EFNA1-202ENST00000368407 ADGRB3O60242 1522 aa36.86■■■■□ 3.49
EFNA1-202ENST00000368407 KIF1BO60333 1816 aa36.86■■■■□ 3.49
EFNA1-202ENST00000368407 DCAF11Q8TEB1 546 aa36.81■■■■□ 3.48
EFNA1-202ENST00000368407 NEURL4Q96JN8 1562 aa36.8■■■■□ 3.48
EFNA1-202ENST00000368407 ZNF326Q5BKZ1 582 aaKnown RBP36.8■■■■□ 3.48
EFNA1-202ENST00000368407 STAG3Q9UJ98 1225 aa36.8■■■■□ 3.48
EFNA1-202ENST00000368407 TMEM131LA2VDJ0 1609 aa36.8■■■■□ 3.48
EFNA1-202ENST00000368407 NLRP1Q9C000 1473 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms