RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PDS5BQ9NTI5 1447 aa8.87□□□□□ -0.99
SPTA1-201ENST00000368147 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
SPTA1-201ENST00000368147 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
SPTA1-201ENST00000368147 ARHGAP35Q9NRY4 1499 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 NUP155O75694 1391 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
SPTA1-201ENST00000368147 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 TCEAL9Q9UHQ7 104 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 RRP7AQ9Y3A4 280 aaKnown RBP8.86□□□□□ -0.99
SPTA1-201ENST00000368147 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 HSCBQ8IWL3 235 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 WIZO95785 1651 aa8.86□□□□□ -0.99
SPTA1-201ENST00000368147 FOXD4L5Q5VV16 416 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-201ENST00000368147 FOXD4L4Q8WXT5 416 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-201ENST00000368147 ATF3P18847 181 aa8.85□□□□□ -0.99
SPTA1-201ENST00000368147 CHMP4BQ9H444 224 aaKnown RBP8.85□□□□□ -0.99
SPTA1-201ENST00000368147 GPATCH3Q96I76 525 aa8.85□□□□□ -0.99
SPTA1-201ENST00000368147 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 FYB1O15117 783 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 ELL2O00472 640 aaPredicted RBP8.84□□□□□ -0.99
SPTA1-201ENST00000368147 RRP12Q5JTH9 1297 aaKnown RBP8.84□□□□□ -0.99
SPTA1-201ENST00000368147 EEA1Q15075 1411 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
SPTA1-201ENST00000368147 APPP05067 770 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 MS4A1P11836 297 aa8.84□□□□□ -0.99
SPTA1-201ENST00000368147 SF3B2Q13435 895 aaKnown RBP8.84□□□□□ -0.99
SPTA1-201ENST00000368147 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
SPTA1-201ENST00000368147 SLC4A3P48751 1232 aa8.83□□□□□ -1
SPTA1-201ENST00000368147 ARID3AQ99856 593 aa8.83□□□□□ -1
SPTA1-201ENST00000368147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.82□□□□□ -1
SPTA1-201ENST00000368147 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 MTMR7Q9Y216 660 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 STRN4Q9NRL3 753 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 PES1O00541 588 aaKnown RBP8.82□□□□□ -1
SPTA1-201ENST00000368147 FHAD1B1AJZ9 1412 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 TERF2IPQ9NYB0 399 aa8.82□□□□□ -1
SPTA1-201ENST00000368147 BAZ1AQ9NRL2 1556 aaPredicted RBP8.81□□□□□ -1
SPTA1-201ENST00000368147 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
SPTA1-201ENST00000368147 KTN1Q86UP2 1357 aaKnown RBP8.81□□□□□ -1
SPTA1-201ENST00000368147 PLIN1O60240 522 aa8.81□□□□□ -1
SPTA1-201ENST00000368147 KDM4AO75164 1064 aa8.81□□□□□ -1
SPTA1-201ENST00000368147 NOL10Q9BSC4 688 aaKnown RBP8.81□□□□□ -1
SPTA1-201ENST00000368147 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
SPTA1-201ENST00000368147 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
SPTA1-201ENST00000368147 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
SPTA1-201ENST00000368147 RILPL2Q969X0 211 aa8.8□□□□□ -1
SPTA1-201ENST00000368147 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
SPTA1-201ENST00000368147 IPO8O15397 1037 aaKnown RBP8.79□□□□□ -1
SPTA1-201ENST00000368147 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
SPTA1-201ENST00000368147 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
SPTA1-201ENST00000368147 JPH4Q96JJ6 628 aa8.79□□□□□ -1
SPTA1-201ENST00000368147 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
SPTA1-201ENST00000368147 TCERG1O14776 1098 aaKnown RBP8.78□□□□□ -1
SPTA1-201ENST00000368147 MFAP1P55081 439 aaKnown RBP8.78□□□□□ -1
SPTA1-201ENST00000368147 COG3Q96JB2 828 aa8.78□□□□□ -1
SPTA1-201ENST00000368147 CALD1Q05682 793 aaKnown RBP8.78□□□□□ -1
SPTA1-201ENST00000368147 KANK4Q5T7N3 995 aaPredicted RBP8.78□□□□□ -1
SPTA1-201ENST00000368147 FOSBP53539 338 aa8.78□□□□□ -1
SPTA1-201ENST00000368147 AIMP1Q12904 312 aaKnown RBP8.77□□□□□ -1.01
SPTA1-201ENST00000368147 HMMRO75330 724 aa8.77□□□□□ -1.01
SPTA1-201ENST00000368147 BCL2L13Q9BXK5 485 aa8.77□□□□□ -1.01
SPTA1-201ENST00000368147 NEFHP12036 1026 aa8.77□□□□□ -1.01
SPTA1-201ENST00000368147 CCDC27Q2M243 656 aa8.77□□□□□ -1.01
SPTA1-201ENST00000368147 FHOD3Q2V2M9 1422 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 ANKRD30AQ9BXX3 1397 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 TEFQ10587 303 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 CCDC88BA6NC98 1476 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 IBSPP21815 317 aaPredicted RBP8.76□□□□□ -1.01
SPTA1-201ENST00000368147 GOLGA6L3A6NEY3 463 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
SPTA1-201ENST00000368147 CCAR1Q8IX12 1150 aaKnown RBP8.75□□□□□ -1.01
SPTA1-201ENST00000368147 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
SPTA1-201ENST00000368147 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
SPTA1-201ENST00000368147 GPS2Q13227 327 aa8.74□□□□□ -1.01
SPTA1-201ENST00000368147 C9orf78Q9NZ63 289 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-201ENST00000368147 RBM42Q9BTD8 480 aaKnown RBP8.74□□□□□ -1.01
SPTA1-201ENST00000368147 SETD5Q9C0A6 1442 aa8.74□□□□□ -1.01
SPTA1-201ENST00000368147 AKAP17AQ02040 695 aaKnown RBP8.73□□□□□ -1.01
SPTA1-201ENST00000368147 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
SPTA1-201ENST00000368147 TPD52L1Q16890 204 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-201ENST00000368147 CFAP44Q96MT7 982 aa8.73□□□□□ -1.01
SPTA1-201ENST00000368147 TPM4P67936 248 aa8.73□□□□□ -1.01
SPTA1-201ENST00000368147 IKQ13123 557 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-201ENST00000368147 CEP89Q96ST8 783 aa8.73□□□□□ -1.01
SPTA1-201ENST00000368147 SLKQ9H2G2 1235 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-201ENST00000368147 HTATSF1O43719 755 aaKnown RBP8.72□□□□□ -1.01
SPTA1-201ENST00000368147 HMOX1P09601 288 aa8.72□□□□□ -1.01
SPTA1-201ENST00000368147 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
SPTA1-201ENST00000368147 CCDC34Q96HJ3 373 aa8.72□□□□□ -1.01
SPTA1-201ENST00000368147 H3BQV1 296 aa8.72□□□□□ -1.01
SPTA1-201ENST00000368147 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
SPTA1-201ENST00000368147 PAXIP1Q6ZW49 1069 aaPredicted RBP8.72□□□□□ -1.01
SPTA1-201ENST00000368147 MCTP1Q6DN14 999 aa8.71□□□□□ -1.01
SPTA1-201ENST00000368147 PPP4R2Q9NY27 417 aa8.71□□□□□ -1.01
SPTA1-201ENST00000368147 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.01
SPTA1-201ENST00000368147 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
SPTA1-201ENST00000368147 XPCQ01831 940 aaPredicted RBP8.71□□□□□ -1.02
SPTA1-201ENST00000368147 DDX54Q8TDD1 881 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms