RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
TMCO1-201ENST00000367881 RAPGEF3O95398 923 aa15.29■□□□□ 0.04
TMCO1-201ENST00000367881 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
TMCO1-201ENST00000367881 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
TMCO1-201ENST00000367881 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
TMCO1-201ENST00000367881 MYT1LQ9UL68 1186 aa15.28■□□□□ 0.04
TMCO1-201ENST00000367881 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.03
TMCO1-201ENST00000367881 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
TMCO1-201ENST00000367881 UNC13BO14795 1591 aa15.26■□□□□ 0.03
TMCO1-201ENST00000367881 EIF2AK4Q9P2K8 1649 aaKnown RBP15.26■□□□□ 0.03
TMCO1-201ENST00000367881 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
TMCO1-201ENST00000367881 DIP2CQ9Y2E4 1556 aa15.25■□□□□ 0.03
TMCO1-201ENST00000367881 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
TMCO1-201ENST00000367881 KDM5DQ9BY66 1539 aa15.23■□□□□ 0.03
TMCO1-201ENST00000367881 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
TMCO1-201ENST00000367881 A2MP01023 1474 aa15.21■□□□□ 0.03
TMCO1-201ENST00000367881 PZPP20742 1482 aa15.21■□□□□ 0.03
TMCO1-201ENST00000367881 DHX29Q7Z478 1369 aaKnown RBP15.21■□□□□ 0.03
TMCO1-201ENST00000367881 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.02
TMCO1-201ENST00000367881 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
TMCO1-201ENST00000367881 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
TMCO1-201ENST00000367881 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
TMCO1-201ENST00000367881 MPHOSPH9Q99550 1183 aa15.19■□□□□ 0.02
TMCO1-201ENST00000367881 NUP155O75694 1391 aa15.18■□□□□ 0.02
TMCO1-201ENST00000367881 RNF17Q9BXT8 1623 aaKnown RBP15.18■□□□□ 0.02
TMCO1-201ENST00000367881 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
TMCO1-201ENST00000367881 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
TMCO1-201ENST00000367881 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
TMCO1-201ENST00000367881 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
TMCO1-201ENST00000367881 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
TMCO1-201ENST00000367881 PRDM15P57071 1507 aaPredicted RBP15.15■□□□□ 0.02
TMCO1-201ENST00000367881 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
TMCO1-201ENST00000367881 KIF3BO15066 747 aa15.14■□□□□ 0.01
TMCO1-201ENST00000367881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■■■□ 19.5
TMCO1-201ENST00000367881 CEP152O94986 1710 aa15.14■□□□□ 0.01
TMCO1-201ENST00000367881 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
TMCO1-201ENST00000367881 ATP10AO60312 1499 aa15.14■□□□□ 0.01
TMCO1-201ENST00000367881 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
TMCO1-201ENST00000367881 TET3O43151 1660 aa15.12■□□□□ 0.01
TMCO1-201ENST00000367881 E9PCH4 1651 aa15.11■□□□□ 0.01
TMCO1-201ENST00000367881 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
TMCO1-201ENST00000367881 PKD2Q13563 968 aa15.1■□□□□ 0.01
TMCO1-201ENST00000367881 KANK1Q14678 1352 aa15.09■□□□□ 0.01
TMCO1-201ENST00000367881 SIN3AQ96ST3 1273 aa15.08■□□□□ 0
TMCO1-201ENST00000367881 AGLP35573 1532 aa15.08■□□□□ 0
TMCO1-201ENST00000367881 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0
TMCO1-201ENST00000367881 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
TMCO1-201ENST00000367881 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
TMCO1-201ENST00000367881 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
TMCO1-201ENST00000367881 SPHKAPQ2M3C7 1700 aa15.06■□□□□ 0
TMCO1-201ENST00000367881 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
TMCO1-201ENST00000367881 LMTK2Q8IWU2 1503 aa15.05■□□□□ -0
TMCO1-201ENST00000367881 GGT6Q6P531 493 aa15.05■□□□□ -0
TMCO1-201ENST00000367881 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
TMCO1-201ENST00000367881 ABCC3O15438 1527 aa15.04■□□□□ -0
TMCO1-201ENST00000367881 TSHZ2Q9NRE2 1034 aa15.04■□□□□ -0
TMCO1-201ENST00000367881 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
TMCO1-201ENST00000367881 TONSLQ96HA7 1378 aa15.02□□□□□ -0.01
TMCO1-201ENST00000367881 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
TMCO1-201ENST00000367881 ANP32CO43423 234 aa15.01□□□□□ -0.01
TMCO1-201ENST00000367881 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
TMCO1-201ENST00000367881 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
TMCO1-201ENST00000367881 WASHC2CQ9Y4E1 1318 aa14.99□□□□□ -0.01
TMCO1-201ENST00000367881 NEFLP07196 543 aa14.98□□□□□ -0.01
TMCO1-201ENST00000367881 TRPM2O94759 1503 aa14.97□□□□□ -0.01
TMCO1-201ENST00000367881 CLTCL1P53675 1640 aa14.95□□□□□ -0.02
TMCO1-201ENST00000367881 CCDC144AA2RUR9 1427 aa14.95□□□□□ -0.02
TMCO1-201ENST00000367881 PTPRTO14522 1441 aa14.95□□□□□ -0.02
TMCO1-201ENST00000367881 NPATQ14207 1427 aa14.95□□□□□ -0.02
TMCO1-201ENST00000367881 KIF1BO60333 1816 aa14.94□□□□□ -0.02
TMCO1-201ENST00000367881 PREX1Q8TCU6 1659 aa14.94□□□□□ -0.02
TMCO1-201ENST00000367881 MLECQ14165 292 aa14.94□□□□□ -0.02
TMCO1-201ENST00000367881 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
TMCO1-201ENST00000367881 FER1L4A9Z1Z3 1794 aa14.93□□□□□ -0.02
TMCO1-201ENST00000367881 ARHGAP31Q2M1Z3 1444 aa14.93□□□□□ -0.02
TMCO1-201ENST00000367881 FKBP8Q14318 412 aa14.92□□□□□ -0.02
TMCO1-201ENST00000367881 MROH2AA6NES4 1674 aa14.91□□□□□ -0.02
TMCO1-201ENST00000367881 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
TMCO1-201ENST00000367881 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
TMCO1-201ENST00000367881 SYNMO15061 1565 aa14.9□□□□□ -0.02
TMCO1-201ENST00000367881 L3MBTL2Q969R5 705 aa14.89□□□□□ -0.03
TMCO1-201ENST00000367881 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
TMCO1-201ENST00000367881 NOS1P29475 1434 aa14.88□□□□□ -0.03
TMCO1-201ENST00000367881 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
TMCO1-201ENST00000367881 MYO5BQ9ULV0 1848 aa14.86□□□□□ -0.03
TMCO1-201ENST00000367881 ESF1Q9H501 851 aaKnown RBP14.86□□□□□ -0.03
TMCO1-201ENST00000367881 C3P01024 1663 aa14.85□□□□□ -0.03
TMCO1-201ENST00000367881 ERVK-7P63135 1459 aa14.85□□□□□ -0.03
TMCO1-201ENST00000367881 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
TMCO1-201ENST00000367881 SPATA31E1Q6ZUB1 1445 aa14.85□□□□□ -0.03
TMCO1-201ENST00000367881 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
TMCO1-201ENST00000367881 IFT172Q9UG01 1749 aa14.84□□□□□ -0.03
TMCO1-201ENST00000367881 ZMYM3Q14202 1370 aa14.83□□□□□ -0.04
TMCO1-201ENST00000367881 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
TMCO1-201ENST00000367881 ADAMTSL3P82987 1691 aa14.83□□□□□ -0.04
TMCO1-201ENST00000367881 RIMS1Q86UR5 1692 aaKnown RBP14.82□□□□□ -0.04
TMCO1-201ENST00000367881 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
TMCO1-201ENST00000367881 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
TMCO1-201ENST00000367881 MSH5O43196 834 aa14.81□□□□□ -0.04
TMCO1-201ENST00000367881 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms