RNA–Protein interactions for RNA: ENST00000367165.3

CLDN20-201, Transcript of claudin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN20, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20-201ENST00000367165 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
CLDN20-201ENST00000367165 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
CLDN20-201ENST00000367165 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
CLDN20-201ENST00000367165 C3P01024 1663 aa15.13■□□□□ 0.01
CLDN20-201ENST00000367165 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
CLDN20-201ENST00000367165 STRCQ7RTU9 1775 aa15.12■□□□□ 0.01
CLDN20-201ENST00000367165 KIDINS220Q9ULH0 1771 aa15.12■□□□□ 0.01
CLDN20-201ENST00000367165 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
CLDN20-201ENST00000367165 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
CLDN20-201ENST00000367165 PTPRTO14522 1441 aa15.11■□□□□ 0.01
CLDN20-201ENST00000367165 SYCP2Q9BX26 1530 aa15.11■□□□□ 0.01
CLDN20-201ENST00000367165 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
CLDN20-201ENST00000367165 NPATQ14207 1427 aa15.09■□□□□ 0.01
CLDN20-201ENST00000367165 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0.01
CLDN20-201ENST00000367165 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
CLDN20-201ENST00000367165 NCOA1Q15788 1441 aa15.08■□□□□ 0
CLDN20-201ENST00000367165 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
CLDN20-201ENST00000367165 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
CLDN20-201ENST00000367165 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
CLDN20-201ENST00000367165 POTEIP0CG38 1075 aa15.06■□□□□ 0
CLDN20-201ENST00000367165 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
CLDN20-201ENST00000367165 ATP7AQ04656 1500 aa15.06■□□□□ 0
CLDN20-201ENST00000367165 MROH2AA6NES4 1674 aa15.06■□□□□ 0
CLDN20-201ENST00000367165 PLXNC1O60486 1568 aa15.05■□□□□ -0
CLDN20-201ENST00000367165 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ -0
CLDN20-201ENST00000367165 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
CLDN20-201ENST00000367165 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
CLDN20-201ENST00000367165 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
CLDN20-201ENST00000367165 A2MP01023 1474 aa15.02■□□□□ -0
CLDN20-201ENST00000367165 IQSEC2Q5JU85 1478 aa15.02■□□□□ -0
CLDN20-201ENST00000367165 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
CLDN20-201ENST00000367165 LTBP4Q8N2S1 1624 aa15.02□□□□□ -0.01
CLDN20-201ENST00000367165 ZMYM3Q14202 1370 aa15.01□□□□□ -0.01
CLDN20-201ENST00000367165 MTUS2Q5JR59 1369 aa15.01□□□□□ -0.01
CLDN20-201ENST00000367165 CAMSAP1Q5T5Y3 1602 aa15.01□□□□□ -0.01
CLDN20-201ENST00000367165 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
CLDN20-201ENST00000367165 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
CLDN20-201ENST00000367165 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
CLDN20-201ENST00000367165 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
CLDN20-201ENST00000367165 MYO3AQ8NEV4 1616 aa14.98□□□□□ -0.01
CLDN20-201ENST00000367165 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
CLDN20-201ENST00000367165 PTPRKQ15262 1439 aa14.97□□□□□ -0.01
CLDN20-201ENST00000367165 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
CLDN20-201ENST00000367165 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
CLDN20-201ENST00000367165 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.01
CLDN20-201ENST00000367165 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
CLDN20-201ENST00000367165 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
CLDN20-201ENST00000367165 GGT6Q6P531 493 aa14.94□□□□□ -0.02
CLDN20-201ENST00000367165 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
CLDN20-201ENST00000367165 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
CLDN20-201ENST00000367165 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
CLDN20-201ENST00000367165 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
CLDN20-201ENST00000367165 PKD2Q13563 968 aa14.93□□□□□ -0.02
CLDN20-201ENST00000367165 ZNF644Q9H582 1327 aaPredicted RBP14.92□□□□□ -0.02
CLDN20-201ENST00000367165 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
CLDN20-201ENST00000367165 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
CLDN20-201ENST00000367165 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
CLDN20-201ENST00000367165 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CLDN20-201ENST00000367165 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
CLDN20-201ENST00000367165 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
CLDN20-201ENST00000367165 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
CLDN20-201ENST00000367165 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
CLDN20-201ENST00000367165 KDM5DQ9BY66 1539 aa14.87□□□□□ -0.03
CLDN20-201ENST00000367165 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
CLDN20-201ENST00000367165 SOCS7O14512 581 aa14.86□□□□□ -0.03
CLDN20-201ENST00000367165 CLCN6P51797 869 aa14.86□□□□□ -0.03
CLDN20-201ENST00000367165 PZPP20742 1482 aa14.86□□□□□ -0.03
CLDN20-201ENST00000367165 NCOA2Q15596 1464 aa14.86□□□□□ -0.03
CLDN20-201ENST00000367165 TNRQ92752 1358 aa14.85□□□□□ -0.03
CLDN20-201ENST00000367165 DNMT1P26358 1616 aaKnown RBP14.85□□□□□ -0.03
CLDN20-201ENST00000367165 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
CLDN20-201ENST00000367165 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
CLDN20-201ENST00000367165 KIF3BO15066 747 aa14.83□□□□□ -0.04
CLDN20-201ENST00000367165 RSPH4AQ5TD94 716 aa14.83□□□□□ -0.04
CLDN20-201ENST00000367165 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
CLDN20-201ENST00000367165 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
CLDN20-201ENST00000367165 NLRP1Q9C000 1473 aa14.8□□□□□ -0.04
CLDN20-201ENST00000367165 CPS1P31327 1500 aa14.8□□□□□ -0.04
CLDN20-201ENST00000367165 POLR1AO95602 1720 aaPredicted RBP14.79□□□□□ -0.04
CLDN20-201ENST00000367165 FBXO31Q5XUX0 539 aaPredicted RBP14.79□□□□□ -0.04
CLDN20-201ENST00000367165 WASHC2CQ9Y4E1 1318 aa14.79□□□□□ -0.04
CLDN20-201ENST00000367165 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
CLDN20-201ENST00000367165 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
CLDN20-201ENST00000367165 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
CLDN20-201ENST00000367165 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
CLDN20-201ENST00000367165 UGGT1Q9NYU2 1555 aa14.76□□□□□ -0.05
CLDN20-201ENST00000367165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLDN20-201ENST00000367165 RNF17Q9BXT8 1623 aaKnown RBP14.75□□□□□ -0.05
CLDN20-201ENST00000367165 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
CLDN20-201ENST00000367165 ANKLE2Q86XL3 938 aa14.75□□□□□ -0.05
CLDN20-201ENST00000367165 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
CLDN20-201ENST00000367165 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
CLDN20-201ENST00000367165 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
CLDN20-201ENST00000367165 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
CLDN20-201ENST00000367165 THEMISQ8N1K5 641 aaPredicted RBP14.74□□□□□ -0.05
CLDN20-201ENST00000367165 ABCC3O15438 1527 aa14.74□□□□□ -0.05
CLDN20-201ENST00000367165 MED14O60244 1454 aa14.74□□□□□ -0.05
CLDN20-201ENST00000367165 ZC3H13Q5T200 1668 aaKnown RBP14.74□□□□□ -0.05
CLDN20-201ENST00000367165 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
CLDN20-201ENST00000367165 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms