RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
PRKN-204ENST00000366896 RTEL1-TNFRSF6BF6WH68 1400 aa20.46■□□□□ 0.87
PRKN-204ENST00000366896 PLXNC1O60486 1568 aa20.45■□□□□ 0.87
PRKN-204ENST00000366896 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
PRKN-204ENST00000366896 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
PRKN-204ENST00000366896 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
PRKN-204ENST00000366896 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
PRKN-204ENST00000366896 KIDINS220Q9ULH0 1771 aa20.42■□□□□ 0.86
PRKN-204ENST00000366896 HECW2Q9P2P5 1572 aa20.41■□□□□ 0.86
PRKN-204ENST00000366896 MLH3Q9UHC1 1453 aa20.41■□□□□ 0.86
PRKN-204ENST00000366896 COL17A1Q9UMD9 1497 aaPredicted RBP20.41■□□□□ 0.86
PRKN-204ENST00000366896 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
PRKN-204ENST00000366896 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.86
PRKN-204ENST00000366896 MPHOSPH9Q99550 1183 aa20.38■□□□□ 0.85
PRKN-204ENST00000366896 FOXD1Q16676 465 aa20.38■□□□□ 0.85
PRKN-204ENST00000366896 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
PRKN-204ENST00000366896 ANKRD50Q9ULJ7 1429 aa20.37■□□□□ 0.85
PRKN-204ENST00000366896 DUOX2Q9NRD8 1548 aa20.36■□□□□ 0.85
PRKN-204ENST00000366896 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
PRKN-204ENST00000366896 MSH5O43196 834 aa20.34■□□□□ 0.85
PRKN-204ENST00000366896 ABCA6Q8N139 1617 aa20.34■□□□□ 0.85
PRKN-204ENST00000366896 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.856e-6■■■■□ 25.1
PRKN-204ENST00000366896 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.84
PRKN-204ENST00000366896 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
PRKN-204ENST00000366896 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
PRKN-204ENST00000366896 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
PRKN-204ENST00000366896 MAGI2Q86UL8 1455 aa20.31■□□□□ 0.84
PRKN-204ENST00000366896 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
PRKN-204ENST00000366896 FANCIQ9NVI1 1328 aa20.31■□□□□ 0.84
PRKN-204ENST00000366896 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
PRKN-204ENST00000366896 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
PRKN-204ENST00000366896 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
PRKN-204ENST00000366896 DHX29Q7Z478 1369 aaKnown RBP20.28■□□□□ 0.84
PRKN-204ENST00000366896 A2MP01023 1474 aa20.27■□□□□ 0.84
PRKN-204ENST00000366896 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
PRKN-204ENST00000366896 EIF2AK4Q9P2K8 1649 aaKnown RBP20.25■□□□□ 0.83
PRKN-204ENST00000366896 NBPF8Q3BBV2 869 aa20.24■□□□□ 0.83
PRKN-204ENST00000366896 UNC13BO14795 1591 aa20.23■□□□□ 0.83
PRKN-204ENST00000366896 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
PRKN-204ENST00000366896 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
PRKN-204ENST00000366896 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
PRKN-204ENST00000366896 ATP10AO60312 1499 aa20.21■□□□□ 0.83
PRKN-204ENST00000366896 SPATA31E1Q6ZUB1 1445 aa20.21■□□□□ 0.83
PRKN-204ENST00000366896 KDM5DQ9BY66 1539 aa20.21■□□□□ 0.83
PRKN-204ENST00000366896 ERICH6BQ5W0A0 696 aa20.2■□□□□ 0.82
PRKN-204ENST00000366896 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
PRKN-204ENST00000366896 BCORL1Q5H9F3 1711 aa20.2■□□□□ 0.82
PRKN-204ENST00000366896 REREQ9P2R6 1566 aa20.19■□□□□ 0.82
PRKN-204ENST00000366896 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
PRKN-204ENST00000366896 PZPP20742 1482 aa20.19■□□□□ 0.82
PRKN-204ENST00000366896 NUP155O75694 1391 aa20.18■□□□□ 0.82
PRKN-204ENST00000366896 POLR1AO95602 1720 aaPredicted RBP20.18■□□□□ 0.82
PRKN-204ENST00000366896 KIF3BO15066 747 aa20.18■□□□□ 0.82
PRKN-204ENST00000366896 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
PRKN-204ENST00000366896 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
PRKN-204ENST00000366896 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
PRKN-204ENST00000366896 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
PRKN-204ENST00000366896 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
PRKN-204ENST00000366896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.82
PRKN-204ENST00000366896 SIGLEC1Q9BZZ2 1709 aa20.14■□□□□ 0.81
PRKN-204ENST00000366896 PRDM15P57071 1507 aaPredicted RBP20.14■□□□□ 0.81
PRKN-204ENST00000366896 FAM135AQ9P2D6 1515 aa20.13■□□□□ 0.81
PRKN-204ENST00000366896 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
PRKN-204ENST00000366896 AGLP35573 1532 aa20.12■□□□□ 0.81
PRKN-204ENST00000366896 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
PRKN-204ENST00000366896 ERICH6Q7L0X2 663 aa20.11■□□□□ 0.81
PRKN-204ENST00000366896 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
PRKN-204ENST00000366896 KANK1Q14678 1352 aa20.08■□□□□ 0.8
PRKN-204ENST00000366896 MRS2Q9HD23 443 aa20.08■□□□□ 0.8
PRKN-204ENST00000366896 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
PRKN-204ENST00000366896 GGT6Q6P531 493 aa20.07■□□□□ 0.8
PRKN-204ENST00000366896 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
PRKN-204ENST00000366896 PPP4R2Q9NY27 417 aa20.06■□□□□ 0.8
PRKN-204ENST00000366896 PKD2Q13563 968 aa20.06■□□□□ 0.8
PRKN-204ENST00000366896 CEP152O94986 1710 aa20.04■□□□□ 0.8
PRKN-204ENST00000366896 TET3O43151 1660 aa20.04■□□□□ 0.8
PRKN-204ENST00000366896 LMTK2Q8IWU2 1503 aa20.04■□□□□ 0.8
PRKN-204ENST00000366896 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
PRKN-204ENST00000366896 ABCC3O15438 1527 aa20.02■□□□□ 0.8
PRKN-204ENST00000366896 E9PCH4 1651 aa20■□□□□ 0.79
PRKN-204ENST00000366896 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
PRKN-204ENST00000366896 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
PRKN-204ENST00000366896 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
PRKN-204ENST00000366896 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
PRKN-204ENST00000366896 USP47Q96K76 1375 aa19.98■□□□□ 0.79
PRKN-204ENST00000366896 CAMSAP1Q5T5Y3 1602 aa19.97■□□□□ 0.79
PRKN-204ENST00000366896 MLECQ14165 292 aa19.97■□□□□ 0.79
PRKN-204ENST00000366896 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
PRKN-204ENST00000366896 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
PRKN-204ENST00000366896 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
PRKN-204ENST00000366896 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
PRKN-204ENST00000366896 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
PRKN-204ENST00000366896 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
PRKN-204ENST00000366896 CLTCQ00610 1675 aaKnown RBP19.93■□□□□ 0.78
PRKN-204ENST00000366896 NPATQ14207 1427 aa19.92■□□□□ 0.78
PRKN-204ENST00000366896 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
PRKN-204ENST00000366896 ARHGAP31Q2M1Z3 1444 aa19.91■□□□□ 0.78
PRKN-204ENST00000366896 PTPRTO14522 1441 aa19.9■□□□□ 0.78
PRKN-204ENST00000366896 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
PRKN-204ENST00000366896 DEKP35659 375 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms