RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-204ENST00000361796 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
CTNND1-204ENST00000361796 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-204ENST00000361796 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
CTNND1-204ENST00000361796 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
CTNND1-204ENST00000361796 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
CTNND1-204ENST00000361796 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
CTNND1-204ENST00000361796 KIF3BO15066 747 aa10.05□□□□□ -0.8
CTNND1-204ENST00000361796 RILPL2Q969X0 211 aa10.05□□□□□ -0.8
CTNND1-204ENST00000361796 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
CTNND1-204ENST00000361796 A0A0U1RQG5 324 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-204ENST00000361796 TPM4P67936 248 aa10.04□□□□□ -0.8
CTNND1-204ENST00000361796 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
CTNND1-204ENST00000361796 PTMSP20962 102 aa10.04□□□□□ -0.8
CTNND1-204ENST00000361796 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
CTNND1-204ENST00000361796 HTATSF1O43719 755 aaKnown RBP10.03□□□□□ -0.8
CTNND1-204ENST00000361796 NGDNQ8NEJ9 315 aaKnown RBP10.03□□□□□ -0.8
CTNND1-204ENST00000361796 AMPHP49418 695 aa10.03□□□□□ -0.8
CTNND1-204ENST00000361796 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
CTNND1-204ENST00000361796 PES1O00541 588 aaKnown RBP10.03□□□□□ -0.8
CTNND1-204ENST00000361796 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
CTNND1-204ENST00000361796 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
CTNND1-204ENST00000361796 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.81
CTNND1-204ENST00000361796 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
CTNND1-204ENST00000361796 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
CTNND1-204ENST00000361796 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
CTNND1-204ENST00000361796 ANKRD45Q5TZF3 282 aa10.02□□□□□ -0.81
CTNND1-204ENST00000361796 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-204ENST00000361796 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-204ENST00000361796 HMMRO75330 724 aa10.01□□□□□ -0.81
CTNND1-204ENST00000361796 TNNT3P45378 269 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-204ENST00000361796 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
CTNND1-204ENST00000361796 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
CTNND1-204ENST00000361796 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
CTNND1-204ENST00000361796 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CTNND1-204ENST00000361796 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
CTNND1-204ENST00000361796 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
CTNND1-204ENST00000361796 WWC1Q8IX03 1113 aa10□□□□□ -0.81
CTNND1-204ENST00000361796 FHOD3Q2V2M9 1422 aa10□□□□□ -0.81
CTNND1-204ENST00000361796 TERF2IPQ9NYB0 399 aa10□□□□□ -0.81
CTNND1-204ENST00000361796 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
CTNND1-204ENST00000361796 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
CTNND1-204ENST00000361796 H3BQV1 296 aa9.99□□□□□ -0.81
CTNND1-204ENST00000361796 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
CTNND1-204ENST00000361796 ST18O60284 1047 aa9.99□□□□□ -0.81
CTNND1-204ENST00000361796 CCAR2Q8N163 923 aaKnown RBP9.99□□□□□ -0.81
CTNND1-204ENST00000361796 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 ST20-MTHFSA0A0A6YYL1 179 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 NACADO15069 1562 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 MARCH6O60337 910 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 NLRP13Q86W25 1043 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 RAD21O60216 631 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 FOSBP53539 338 aa9.98□□□□□ -0.81
CTNND1-204ENST00000361796 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
CTNND1-204ENST00000361796 PDE4AP27815 886 aa9.97□□□□□ -0.81
CTNND1-204ENST00000361796 CSPP1Q1MSJ5 1256 aa9.97□□□□□ -0.81
CTNND1-204ENST00000361796 MCTP1Q6DN14 999 aa9.97□□□□□ -0.81
CTNND1-204ENST00000361796 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
CTNND1-204ENST00000361796 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-204ENST00000361796 ZNF592Q92610 1267 aa9.96□□□□□ -0.81
CTNND1-204ENST00000361796 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.81
CTNND1-204ENST00000361796 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
CTNND1-204ENST00000361796 TPD52L1Q16890 204 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-204ENST00000361796 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.81
CTNND1-204ENST00000361796 MYBBP1AQ9BQG0 1328 aaKnown RBP9.96□□□□□ -0.82
CTNND1-204ENST00000361796 KIF15Q9NS87 1388 aa9.96□□□□□ -0.82
CTNND1-204ENST00000361796 FAM184AQ8NB25 1140 aa9.95□□□□□ -0.82
CTNND1-204ENST00000361796 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
CTNND1-204ENST00000361796 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
CTNND1-204ENST00000361796 PHF14O94880 888 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 TPM3P06753 285 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-204ENST00000361796 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
CTNND1-204ENST00000361796 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-204ENST00000361796 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
CTNND1-204ENST00000361796 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
CTNND1-204ENST00000361796 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-204ENST00000361796 KDM4AO75164 1064 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 APAF1O14727 1248 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 GOLGA6L19H0YKK7 550 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 GSE1Q14687 1217 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 C1orf141Q5JVX7 400 aa9.92□□□□□ -0.82
CTNND1-204ENST00000361796 ZKSCAN2Q63HK3 967 aa9.91□□□□□ -0.82
CTNND1-204ENST00000361796 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
CTNND1-204ENST00000361796 CEP89Q96ST8 783 aa9.91□□□□□ -0.82
CTNND1-204ENST00000361796 DIAPH3Q9NSV4 1193 aa9.91□□□□□ -0.82
CTNND1-204ENST00000361796 PDE3BQ13370 1112 aa9.91□□□□□ -0.82
CTNND1-204ENST00000361796 COG3Q96JB2 828 aa9.91□□□□□ -0.82
CTNND1-204ENST00000361796 BECN2A8MW95 431 aa9.9□□□□□ -0.82
CTNND1-204ENST00000361796 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-204ENST00000361796 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-204ENST00000361796 APPP05067 770 aa9.89□□□□□ -0.83
CTNND1-204ENST00000361796 AKAP17AQ02040 695 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms