RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
CALD1-201ENST00000361675 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
CALD1-201ENST00000361675 MYOM3Q5VTT5 1437 aa11.91□□□□□ -0.5
CALD1-201ENST00000361675 WASHC2CQ9Y4E1 1318 aa11.9□□□□□ -0.5
CALD1-201ENST00000361675 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.51
CALD1-201ENST00000361675 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.51
CALD1-201ENST00000361675 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
CALD1-201ENST00000361675 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
CALD1-201ENST00000361675 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
CALD1-201ENST00000361675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
CALD1-201ENST00000361675 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
CALD1-201ENST00000361675 FAM193AP78312 1265 aa11.88□□□□□ -0.51
CALD1-201ENST00000361675 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
CALD1-201ENST00000361675 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
CALD1-201ENST00000361675 NAIPQ13075 1403 aa11.87□□□□□ -0.51
CALD1-201ENST00000361675 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
CALD1-201ENST00000361675 EHBP1L1Q8N3D4 1523 aa11.87□□□□□ -0.51
CALD1-201ENST00000361675 CLSTN1O94985 981 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
CALD1-201ENST00000361675 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
CALD1-201ENST00000361675 KDM6BO15054 1643 aa11.86□□□□□ -0.51
CALD1-201ENST00000361675 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
CALD1-201ENST00000361675 TEX2Q8IWB9 1127 aa11.85□□□□□ -0.51
CALD1-201ENST00000361675 KIAA0556O60303 1618 aa11.85□□□□□ -0.51
CALD1-201ENST00000361675 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
CALD1-201ENST00000361675 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
CALD1-201ENST00000361675 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
CALD1-201ENST00000361675 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
CALD1-201ENST00000361675 SOX12O15370 315 aa11.83□□□□□ -0.52
CALD1-201ENST00000361675 FRAT2O75474 233 aaPredicted RBP11.83□□□□□ -0.52
CALD1-201ENST00000361675 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
CALD1-201ENST00000361675 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
CALD1-201ENST00000361675 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
CALD1-201ENST00000361675 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
CALD1-201ENST00000361675 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
CALD1-201ENST00000361675 FOXD1Q16676 465 aa11.81□□□□□ -0.52
CALD1-201ENST00000361675 PRG4Q92954 1404 aaPredicted RBP11.8□□□□□ -0.52
CALD1-201ENST00000361675 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
CALD1-201ENST00000361675 CCER2I3L3R5 266 aa11.8□□□□□ -0.52
CALD1-201ENST00000361675 RBM25P49756 843 aaKnown RBP11.8□□□□□ -0.52
CALD1-201ENST00000361675 DDRGK1Q96HY6 314 aa11.8□□□□□ -0.52
CALD1-201ENST00000361675 KCNG1Q9UIX4 513 aa11.79□□□□□ -0.52
CALD1-201ENST00000361675 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
CALD1-201ENST00000361675 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
CALD1-201ENST00000361675 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
CALD1-201ENST00000361675 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
CALD1-201ENST00000361675 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
CALD1-201ENST00000361675 VGLL3A8MV65 326 aa11.78□□□□□ -0.52
CALD1-201ENST00000361675 PDE4AP27815 886 aa11.78□□□□□ -0.52
CALD1-201ENST00000361675 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
CALD1-201ENST00000361675 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
CALD1-201ENST00000361675 RAPGEF6Q8TEU7 1601 aa11.77□□□□□ -0.53
CALD1-201ENST00000361675 GTF2E1P29083 439 aaPredicted RBP11.76□□□□□ -0.53
CALD1-201ENST00000361675 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
CALD1-201ENST00000361675 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
CALD1-201ENST00000361675 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
CALD1-201ENST00000361675 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
CALD1-201ENST00000361675 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
CALD1-201ENST00000361675 NUP160Q12769 1436 aa11.74□□□□□ -0.53
CALD1-201ENST00000361675 ABCC5O15440 1437 aa11.74□□□□□ -0.53
CALD1-201ENST00000361675 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
CALD1-201ENST00000361675 KIF14Q15058 1648 aa11.73□□□□□ -0.53
CALD1-201ENST00000361675 POGKQ9P215 609 aa11.73□□□□□ -0.53
CALD1-201ENST00000361675 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
CALD1-201ENST00000361675 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
CALD1-201ENST00000361675 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
CALD1-201ENST00000361675 DAPK1P53355 1430 aa11.72□□□□□ -0.53
CALD1-201ENST00000361675 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
CALD1-201ENST00000361675 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
CALD1-201ENST00000361675 TONSLQ96HA7 1378 aa11.71□□□□□ -0.53
CALD1-201ENST00000361675 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.54
CALD1-201ENST00000361675 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.54
CALD1-201ENST00000361675 PRDM16Q9HAZ2 1276 aa11.71□□□□□ -0.54
CALD1-201ENST00000361675 PDCL3Q9H2J4 239 aa11.7□□□□□ -0.54
CALD1-201ENST00000361675 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
CALD1-201ENST00000361675 RAD21O60216 631 aa11.69□□□□□ -0.54
CALD1-201ENST00000361675 STAC3Q96MF2 364 aa11.69□□□□□ -0.54
CALD1-201ENST00000361675 E9PSI1 815 aa11.69□□□□□ -0.54
CALD1-201ENST00000361675 GPATCH8Q9UKJ3 1502 aaKnown RBP11.69□□□□□ -0.54
CALD1-201ENST00000361675 TROQ12816 1431 aaPredicted RBP11.68□□□□□ -0.54
CALD1-201ENST00000361675 KDM4AO75164 1064 aa11.68□□□□□ -0.54
CALD1-201ENST00000361675 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
CALD1-201ENST00000361675 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
CALD1-201ENST00000361675 CFDP1Q9UEE9 299 aaPredicted RBP11.68□□□□□ -0.54
CALD1-201ENST00000361675 ANAPC15P60006 121 aa11.67□□□□□ -0.54
CALD1-201ENST00000361675 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
CALD1-201ENST00000361675 ATP10BO94823 1461 aa11.67□□□□□ -0.54
CALD1-201ENST00000361675 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
CALD1-201ENST00000361675 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
CALD1-201ENST00000361675 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
CALD1-201ENST00000361675 CAMSAP2Q08AD1 1489 aa11.66□□□□□ -0.54
CALD1-201ENST00000361675 TCERG1O14776 1098 aaKnown RBP11.65□□□□□ -0.54
CALD1-201ENST00000361675 L3MBTL2Q969R5 705 aa11.65□□□□□ -0.54
CALD1-201ENST00000361675 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
CALD1-201ENST00000361675 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
CALD1-201ENST00000361675 NECTIN2Q92692 538 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms