RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
TOP1-201ENST00000361337 ABCC10Q5T3U5 1492 aa12.29□□□□□ -0.44
TOP1-201ENST00000361337 PLXNC1O60486 1568 aa12.29□□□□□ -0.44
TOP1-201ENST00000361337 UNC13BO14795 1591 aa12.28□□□□□ -0.44
TOP1-201ENST00000361337 NEURL4Q96JN8 1562 aa12.28□□□□□ -0.44
TOP1-201ENST00000361337 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
TOP1-201ENST00000361337 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
TOP1-201ENST00000361337 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
TOP1-201ENST00000361337 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
TOP1-201ENST00000361337 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
TOP1-201ENST00000361337 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
TOP1-201ENST00000361337 NUP155O75694 1391 aa12.26□□□□□ -0.45
TOP1-201ENST00000361337 ANP32AP39687 249 aaKnown RBP12.26□□□□□ -0.45
TOP1-201ENST00000361337 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
TOP1-201ENST00000361337 KIF14Q15058 1648 aa12.25□□□□□ -0.45
TOP1-201ENST00000361337 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
TOP1-201ENST00000361337 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
TOP1-201ENST00000361337 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
TOP1-201ENST00000361337 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
TOP1-201ENST00000361337 RAPGEF3O95398 923 aa12.23□□□□□ -0.45
TOP1-201ENST00000361337 E9PCH4 1651 aa12.23□□□□□ -0.45
TOP1-201ENST00000361337 LAMC1P11047 1609 aa12.23□□□□□ -0.45
TOP1-201ENST00000361337 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
TOP1-201ENST00000361337 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
TOP1-201ENST00000361337 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
TOP1-201ENST00000361337 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.45
TOP1-201ENST00000361337 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
TOP1-201ENST00000361337 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
TOP1-201ENST00000361337 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOP1-201ENST00000361337 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
TOP1-201ENST00000361337 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
TOP1-201ENST00000361337 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
TOP1-201ENST00000361337 ZCCHC11Q5TAX3 1644 aaKnown RBP12.18□□□□□ -0.46
TOP1-201ENST00000361337 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
TOP1-201ENST00000361337 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
TOP1-201ENST00000361337 RPRD2Q5VT52 1461 aaKnown RBP12.18□□□□□ -0.46
TOP1-201ENST00000361337 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
TOP1-201ENST00000361337 VWDEQ8N2E2 1590 aa12.18□□□□□ -0.46
TOP1-201ENST00000361337 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
TOP1-201ENST00000361337 RNF17Q9BXT8 1623 aaKnown RBP12.16□□□□□ -0.46
TOP1-201ENST00000361337 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
TOP1-201ENST00000361337 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
TOP1-201ENST00000361337 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
TOP1-201ENST00000361337 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
TOP1-201ENST00000361337 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
TOP1-201ENST00000361337 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
TOP1-201ENST00000361337 INO80Q9ULG1 1556 aaPredicted RBP12.13□□□□□ -0.47
TOP1-201ENST00000361337 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
TOP1-201ENST00000361337 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
TOP1-201ENST00000361337 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
TOP1-201ENST00000361337 STK26Q9P289 416 aa12.12□□□□□ -0.47
TOP1-201ENST00000361337 ABCC5O15440 1437 aa12.12□□□□□ -0.47
TOP1-201ENST00000361337 DAPK1P53355 1430 aa12.12□□□□□ -0.47
TOP1-201ENST00000361337 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
TOP1-201ENST00000361337 USP47Q96K76 1375 aa12.11□□□□□ -0.47
TOP1-201ENST00000361337 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
TOP1-201ENST00000361337 TTC37Q6PGP7 1564 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
TOP1-201ENST00000361337 NEFMP07197 916 aa12.1□□□□□ -0.47
TOP1-201ENST00000361337 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
TOP1-201ENST00000361337 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.47
TOP1-201ENST00000361337 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
TOP1-201ENST00000361337 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
TOP1-201ENST00000361337 PZPP20742 1482 aa12.07□□□□□ -0.48
TOP1-201ENST00000361337 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
TOP1-201ENST00000361337 CEP152O94986 1710 aa12.07□□□□□ -0.48
TOP1-201ENST00000361337 ROCK1Q13464 1354 aa12.06□□□□□ -0.48
TOP1-201ENST00000361337 ARHGAP5Q13017 1502 aa12.05□□□□□ -0.48
TOP1-201ENST00000361337 TNNT2P45379 298 aaPredicted RBP12.05□□□□□ -0.48
TOP1-201ENST00000361337 ATP10BO94823 1461 aa12.05□□□□□ -0.48
TOP1-201ENST00000361337 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
TOP1-201ENST00000361337 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
TOP1-201ENST00000361337 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
TOP1-201ENST00000361337 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
TOP1-201ENST00000361337 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
TOP1-201ENST00000361337 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
TOP1-201ENST00000361337 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
TOP1-201ENST00000361337 PLIN1O60240 522 aa12.02□□□□□ -0.48
TOP1-201ENST00000361337 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.48
TOP1-201ENST00000361337 ANKRD50Q9ULJ7 1429 aa12.02□□□□□ -0.48
TOP1-201ENST00000361337 PDE4AP27815 886 aa12.02□□□□□ -0.49
TOP1-201ENST00000361337 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
TOP1-201ENST00000361337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.02□□□□□ -0.49
TOP1-201ENST00000361337 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
TOP1-201ENST00000361337 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
TOP1-201ENST00000361337 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
TOP1-201ENST00000361337 KDM5CP41229 1560 aa12.01□□□□□ -0.49
TOP1-201ENST00000361337 KANK1Q14678 1352 aa12□□□□□ -0.49
TOP1-201ENST00000361337 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
TOP1-201ENST00000361337 ABCC1P33527 1531 aa12□□□□□ -0.49
TOP1-201ENST00000361337 KIAA1107Q9UPP5 1409 aa12□□□□□ -0.49
TOP1-201ENST00000361337 SPHKAPQ2M3C7 1700 aa11.99□□□□□ -0.49
TOP1-201ENST00000361337 TRAK1Q9UPV9 953 aa11.99□□□□□ -0.49
TOP1-201ENST00000361337 BACH2Q9BYV9 841 aa11.98□□□□□ -0.49
TOP1-201ENST00000361337 SOX12O15370 315 aa11.98□□□□□ -0.49
TOP1-201ENST00000361337 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms