RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
CLSTN1-201ENST00000361311 E9PSI1 815 aa20.07■□□□□ 0.8
CLSTN1-201ENST00000361311 APAF1O14727 1248 aa20.06■□□□□ 0.8
CLSTN1-201ENST00000361311 SKOR2Q2VWA4 1001 aaPredicted RBP20.06■□□□□ 0.8
CLSTN1-201ENST00000361311 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
CLSTN1-201ENST00000361311 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
CLSTN1-201ENST00000361311 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
CLSTN1-201ENST00000361311 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
CLSTN1-201ENST00000361311 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
CLSTN1-201ENST00000361311 BCL2L13Q9BXK5 485 aa20.05■□□□□ 0.8
CLSTN1-201ENST00000361311 MRE11P49959 708 aa20.04■□□□□ 0.8
CLSTN1-201ENST00000361311 HFM1A2PYH4 1435 aa20.03■□□□□ 0.8
CLSTN1-201ENST00000361311 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
CLSTN1-201ENST00000361311 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
CLSTN1-201ENST00000361311 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
CLSTN1-201ENST00000361311 FAM13BQ9NYF5 915 aa19.99■□□□□ 0.79
CLSTN1-201ENST00000361311 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
CLSTN1-201ENST00000361311 CUX1P39880 1505 aa19.98■□□□□ 0.79
CLSTN1-201ENST00000361311 TRAK2O60296 914 aa19.98■□□□□ 0.79
CLSTN1-201ENST00000361311 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
CLSTN1-201ENST00000361311 UBE2Q2Q8WVN8 375 aa19.98■□□□□ 0.79
CLSTN1-201ENST00000361311 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
CLSTN1-201ENST00000361311 ADAMTS8Q9UP79 889 aa19.97■□□□□ 0.79
CLSTN1-201ENST00000361311 SYAP1Q96A49 352 aaPredicted RBP19.96■□□□□ 0.79
CLSTN1-201ENST00000361311 APBB1O00213 710 aa19.96■□□□□ 0.79
CLSTN1-201ENST00000361311 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
CLSTN1-201ENST00000361311 MCCP23508 829 aa19.95■□□□□ 0.78
CLSTN1-201ENST00000361311 C22orf23Q9BZE7 217 aa19.95■□□□□ 0.78
CLSTN1-201ENST00000361311 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 POGKQ9P215 609 aa19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 EIF3AQ14152 1382 aaKnown RBP19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 ZRSR1Q15695 479 aaKnown RBP19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
CLSTN1-201ENST00000361311 MAPKBP1O60336 1514 aa19.92■□□□□ 0.78
CLSTN1-201ENST00000361311 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
CLSTN1-201ENST00000361311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLSTN1-201ENST00000361311 HNRNPMP52272 730 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLSTN1-201ENST00000361311 FYCO1Q9BQS8 1478 aa19.91■□□□□ 0.78
CLSTN1-201ENST00000361311 DRC7Q8IY82 874 aa19.91■□□□□ 0.78
CLSTN1-201ENST00000361311 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
CLSTN1-201ENST00000361311 GOLGA6L4A6NEF3 574 aa19.9■□□□□ 0.78
CLSTN1-201ENST00000361311 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
CLSTN1-201ENST00000361311 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
CLSTN1-201ENST00000361311 NAIPQ13075 1403 aa19.89■□□□□ 0.77
CLSTN1-201ENST00000361311 RRP9O43818 475 aaKnown RBP19.88■□□□□ 0.77
CLSTN1-201ENST00000361311 TPM2P07951 284 aa19.88■□□□□ 0.77
CLSTN1-201ENST00000361311 ST18O60284 1047 aa19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 CFTRP13569 1480 aa19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 FOXD4L5Q5VV16 416 aaPredicted RBP19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 FOXD4L4Q8WXT5 416 aaPredicted RBP19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
CLSTN1-201ENST00000361311 NASPP49321 788 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-201ENST00000361311 ANKRD45Q5TZF3 282 aa19.85■□□□□ 0.77
CLSTN1-201ENST00000361311 R3HCC1Q9Y3T6 440 aaKnown RBP19.84■□□□□ 0.77
CLSTN1-201ENST00000361311 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
CLSTN1-201ENST00000361311 ESPNB1AK53 854 aa19.84■□□□□ 0.77
CLSTN1-201ENST00000361311 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.77
CLSTN1-201ENST00000361311 SRPK2P78362 688 aaKnown RBP19.83■□□□□ 0.77
CLSTN1-201ENST00000361311 DZIP1LQ8IYY4 767 aaKnown RBP19.83■□□□□ 0.77
CLSTN1-201ENST00000361311 MCM4P33991 863 aa19.83■□□□□ 0.77
CLSTN1-201ENST00000361311 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
CLSTN1-201ENST00000361311 AAMPQ13685 434 aa19.83■□□□□ 0.76
CLSTN1-201ENST00000361311 CSPP1Q1MSJ5 1256 aa19.82■□□□□ 0.76
CLSTN1-201ENST00000361311 NRDCO43847 1150 aa19.82■□□□□ 0.76
CLSTN1-201ENST00000361311 MAP7D2Q96T17 732 aa19.82■□□□□ 0.76
CLSTN1-201ENST00000361311 GRPEL1Q9HAV7 217 aa19.82■□□□□ 0.76
CLSTN1-201ENST00000361311 DDX19BQ9UMR2 479 aa19.82■□□□□ 0.76
CLSTN1-201ENST00000361311 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
CLSTN1-201ENST00000361311 BCAR3O75815 825 aa19.81■□□□□ 0.76
CLSTN1-201ENST00000361311 KCNJ4P48050 445 aa19.81■□□□□ 0.76
CLSTN1-201ENST00000361311 PDZRN3Q9UPQ7 1066 aa19.81■□□□□ 0.76
CLSTN1-201ENST00000361311 PHF14O94880 888 aa19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 PDE3AQ14432 1141 aa19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 KANK1Q14678 1352 aa19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 C20orf194Q5TEA3 1177 aa19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 NOL8Q76FK4 1167 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 ISY1Q9ULR0 285 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
CLSTN1-201ENST00000361311 CARMIL2Q6F5E8 1435 aa19.78■□□□□ 0.76
CLSTN1-201ENST00000361311 PPP2R1AP30153 589 aa19.77■□□□□ 0.76
CLSTN1-201ENST00000361311 LNPKQ9C0E8 428 aa19.77■□□□□ 0.76
CLSTN1-201ENST00000361311 RBM10P98175 930 aaKnown RBP19.76■□□□□ 0.75
CLSTN1-201ENST00000361311 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
CLSTN1-201ENST00000361311 MCTP1Q6DN14 999 aa19.75■□□□□ 0.75
CLSTN1-201ENST00000361311 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
CLSTN1-201ENST00000361311 NUCB2P80303 420 aa19.75■□□□□ 0.75
CLSTN1-201ENST00000361311 CCDC173Q0VFZ6 552 aa19.74■□□□□ 0.75
CLSTN1-201ENST00000361311 OS9Q13438 667 aaPredicted RBP19.74■□□□□ 0.75
CLSTN1-201ENST00000361311 MTERF4Q7Z6M4 381 aaKnown RBP19.74■□□□□ 0.75
CLSTN1-201ENST00000361311 KIAA1211Q6ZU35 1233 aa19.74■□□□□ 0.75
CLSTN1-201ENST00000361311 FOXD4L6Q3SYB3 417 aaPredicted RBP19.73■□□□□ 0.75
CLSTN1-201ENST00000361311 FOXD4L3Q6VB84 417 aaPredicted RBP19.73■□□□□ 0.75
CLSTN1-201ENST00000361311 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
CLSTN1-201ENST00000361311 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
CLSTN1-201ENST00000361311 FGD1P98174 961 aa19.72■□□□□ 0.75
CLSTN1-201ENST00000361311 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms