RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 EIF2S2P20042 333 aaKnown RBP25.54■■□□□ 1.68
CDC42BPB-201ENST00000361246 FAM69CQ0P6D2 419 aa25.54■■□□□ 1.68
CDC42BPB-201ENST00000361246 GZF1Q9H116 711 aaPredicted RBP25.54■■□□□ 1.68
CDC42BPB-201ENST00000361246 MFAP1P55081 439 aaKnown RBP25.53■■□□□ 1.68
CDC42BPB-201ENST00000361246 CALD1Q05682 793 aaKnown RBP25.52■■□□□ 1.68
CDC42BPB-201ENST00000361246 WIZO95785 1651 aa25.52■■□□□ 1.68
CDC42BPB-201ENST00000361246 GPATCH3Q96I76 525 aa25.52■■□□□ 1.68
CDC42BPB-201ENST00000361246 PSME1Q06323 249 aa25.51■■□□□ 1.67
CDC42BPB-201ENST00000361246 EIF3AQ14152 1382 aaKnown RBP25.51■■□□□ 1.67
CDC42BPB-201ENST00000361246 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
CDC42BPB-201ENST00000361246 NOP58Q9Y2X3 529 aaKnown RBP25.49■■□□□ 1.67
CDC42BPB-201ENST00000361246 MARCH6O60337 910 aa25.49■■□□□ 1.67
CDC42BPB-201ENST00000361246 BCL2L13Q9BXK5 485 aa25.48■■□□□ 1.67
CDC42BPB-201ENST00000361246 ARID3AQ99856 593 aa25.47■■□□□ 1.67
CDC42BPB-201ENST00000361246 SLKQ9H2G2 1235 aaPredicted RBP25.47■■□□□ 1.67
CDC42BPB-201ENST00000361246 PPP1R1BQ9UD71 204 aaPredicted RBP25.46■■□□□ 1.67
CDC42BPB-201ENST00000361246 NRDCO43847 1150 aa25.46■■□□□ 1.67
CDC42BPB-201ENST00000361246 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
CDC42BPB-201ENST00000361246 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
CDC42BPB-201ENST00000361246 RAB3GAP2Q9H2M9 1393 aa25.46■■□□□ 1.67
CDC42BPB-201ENST00000361246 RCAN3Q9UKA8 241 aa25.45■■□□□ 1.67
CDC42BPB-201ENST00000361246 USP35Q9P2H5 1018 aa25.45■■□□□ 1.66
CDC42BPB-201ENST00000361246 KIAA2012Q0VF49 1180 aa25.44■■□□□ 1.66
CDC42BPB-201ENST00000361246 TCERG1O14776 1098 aaKnown RBP25.44■■□□□ 1.66
CDC42BPB-201ENST00000361246 NOC3LQ8WTT2 800 aaKnown RBP25.42■■□□□ 1.66
CDC42BPB-201ENST00000361246 COG3Q96JB2 828 aa25.42■■□□□ 1.66
CDC42BPB-201ENST00000361246 RILPL2Q969X0 211 aa25.42■■□□□ 1.66
CDC42BPB-201ENST00000361246 TRIM34Q9BYJ4 488 aa25.4■■□□□ 1.66
CDC42BPB-201ENST00000361246 FOXD4L6Q3SYB3 417 aaPredicted RBP25.39■■□□□ 1.66
CDC42BPB-201ENST00000361246 FOXD4L3Q6VB84 417 aaPredicted RBP25.39■■□□□ 1.66
CDC42BPB-201ENST00000361246 L3MBTL2Q969R5 705 aa25.39■■□□□ 1.66
CDC42BPB-201ENST00000361246 TTC5Q8N0Z6 440 aa25.39■■□□□ 1.65
CDC42BPB-201ENST00000361246 RWDD1Q9H446 243 aaPredicted RBP25.39■■□□□ 1.65
CDC42BPB-201ENST00000361246 ZNF428Q96B54 188 aa25.37■■□□□ 1.65
CDC42BPB-201ENST00000361246 L1TD1Q5T7N2 865 aaKnown RBP25.36■■□□□ 1.65
CDC42BPB-201ENST00000361246 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
CDC42BPB-201ENST00000361246 FBXO3Q9UK99 471 aa25.35■■□□□ 1.65
CDC42BPB-201ENST00000361246 ATF3P18847 181 aa25.35■■□□□ 1.65
CDC42BPB-201ENST00000361246 TEFQ10587 303 aa25.35■■□□□ 1.65
CDC42BPB-201ENST00000361246 FAM177BA6PVY3 158 aa25.34■■□□□ 1.65
CDC42BPB-201ENST00000361246 PANK3Q9H999 370 aa25.34■■□□□ 1.65
CDC42BPB-201ENST00000361246 CTDP1Q9Y5B0 961 aaPredicted RBP25.34■■□□□ 1.65
CDC42BPB-201ENST00000361246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.34■■□□□ 1.65
CDC42BPB-201ENST00000361246 NUTM2BA6NNL0 878 aaPredicted RBP25.33■■□□□ 1.65
CDC42BPB-201ENST00000361246 NUTM2EB1AL46 878 aaPredicted RBP25.33■■□□□ 1.65
CDC42BPB-201ENST00000361246 NUTM2AQ8IVF1 878 aaPredicted RBP25.33■■□□□ 1.65
CDC42BPB-201ENST00000361246 PES1O00541 588 aaKnown RBP25.33■■□□□ 1.64
CDC42BPB-201ENST00000361246 CWC22Q9HCG8 908 aaKnown RBP25.33■■□□□ 1.64
CDC42BPB-201ENST00000361246 VPS37DQ86XT2 251 aa25.32■■□□□ 1.64
CDC42BPB-201ENST00000361246 MSNP26038 577 aaKnown RBP25.31■■□□□ 1.64
CDC42BPB-201ENST00000361246 RALBP1Q15311 655 aa25.3■■□□□ 1.64
CDC42BPB-201ENST00000361246 HMMRO75330 724 aa25.3■■□□□ 1.64
CDC42BPB-201ENST00000361246 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
CDC42BPB-201ENST00000361246 CHAF1AQ13111 956 aaPredicted RBP25.29■■□□□ 1.64
CDC42BPB-201ENST00000361246 CCDC18Q5T9S5 1454 aa25.29■■□□□ 1.64
CDC42BPB-201ENST00000361246 FYB1O15117 783 aa25.28■■□□□ 1.64
CDC42BPB-201ENST00000361246 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
CDC42BPB-201ENST00000361246 CENPJQ9HC77 1338 aaPredicted RBP25.27■■□□□ 1.64
CDC42BPB-201ENST00000361246 ST20-MTHFSA0A0A6YYL1 179 aa25.27■■□□□ 1.64
CDC42BPB-201ENST00000361246 TCEAL9Q9UHQ7 104 aa25.26■■□□□ 1.64
CDC42BPB-201ENST00000361246 APPP05067 770 aa25.26■■□□□ 1.63
CDC42BPB-201ENST00000361246 PLIN1O60240 522 aa25.26■■□□□ 1.63
CDC42BPB-201ENST00000361246 PTPRGP23470 1445 aa25.25■■□□□ 1.63
CDC42BPB-201ENST00000361246 AIMP1Q12904 312 aaKnown RBP25.25■■□□□ 1.63
CDC42BPB-201ENST00000361246 DHX16O60231 1041 aaKnown RBP25.25■■□□□ 1.63
CDC42BPB-201ENST00000361246 LMOD3Q0VAK6 560 aa25.25■■□□□ 1.63
CDC42BPB-201ENST00000361246 NOL10Q9BSC4 688 aaKnown RBP25.24■■□□□ 1.63
CDC42BPB-201ENST00000361246 MTMR7Q9Y216 660 aa25.24■■□□□ 1.63
CDC42BPB-201ENST00000361246 C9orf78Q9NZ63 289 aaPredicted RBP25.24■■□□□ 1.63
CDC42BPB-201ENST00000361246 PMFBP1Q8TBY8 1022 aa25.23■■□□□ 1.63
CDC42BPB-201ENST00000361246 KDM4AO75164 1064 aa25.22■■□□□ 1.63
CDC42BPB-201ENST00000361246 HMOX1P09601 288 aa25.22■■□□□ 1.63
CDC42BPB-201ENST00000361246 STRN4Q9NRL3 753 aa25.22■■□□□ 1.63
CDC42BPB-201ENST00000361246 CCDC144AA2RUR9 1427 aa25.22■■□□□ 1.63
CDC42BPB-201ENST00000361246 ANKRD45Q5TZF3 282 aa25.22■■□□□ 1.63
CDC42BPB-201ENST00000361246 FOSBP53539 338 aa25.21■■□□□ 1.63
CDC42BPB-201ENST00000361246 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
CDC42BPB-201ENST00000361246 EVC2Q86UK5 1308 aa25.21■■□□□ 1.63
CDC42BPB-201ENST00000361246 VGFO15240 615 aaPredicted RBP25.2■■□□□ 1.62
CDC42BPB-201ENST00000361246 CNKSR2Q8WXI2 1034 aa25.19■■□□□ 1.62
CDC42BPB-201ENST00000361246 KRI1Q8N9T8 703 aaKnown RBP25.19■■□□□ 1.62
CDC42BPB-201ENST00000361246 SF3A1Q15459 793 aaKnown RBP25.19■■□□□ 1.62
CDC42BPB-201ENST00000361246 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
CDC42BPB-201ENST00000361246 NLRP2Q9NX02 1062 aa25.18■■□□□ 1.62
CDC42BPB-201ENST00000361246 CFAP44Q96MT7 982 aa25.18■■□□□ 1.62
CDC42BPB-201ENST00000361246 H3BQV1 296 aa25.17■■□□□ 1.62
CDC42BPB-201ENST00000361246 IFFO2Q5TF58 517 aa25.17■■□□□ 1.62
CDC42BPB-201ENST00000361246 A0A0U1RQG5 324 aaPredicted RBP25.16■■□□□ 1.62
CDC42BPB-201ENST00000361246 RBM33Q96EV2 1170 aaKnown RBP25.16■■□□□ 1.62
CDC42BPB-201ENST00000361246 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 AKAP17AQ02040 695 aaKnown RBP25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 MCTP1Q6DN14 999 aa25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 DCAF8L1A6NGE4 600 aa25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 NEXNQ0ZGT2 675 aa25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 KIF16BQ96L93 1317 aa25.15■■□□□ 1.62
CDC42BPB-201ENST00000361246 CHMP4AQ9BY43 222 aa25.14■■□□□ 1.62
CDC42BPB-201ENST00000361246 HTATSF1O43719 755 aaKnown RBP25.14■■□□□ 1.62
CDC42BPB-201ENST00000361246 TPM4P67936 248 aa25.14■■□□□ 1.61
CDC42BPB-201ENST00000361246 SLC4A3P48751 1232 aa25.13■■□□□ 1.61
CDC42BPB-201ENST00000361246 GBP4Q96PP9 640 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms