RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 TOM1O60784 492 aa9.21□□□□□ -0.93
RAB5B-201ENST00000360299 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.93
RAB5B-201ENST00000360299 CASKIN1Q8WXD9 1431 aa9.21□□□□□ -0.93
RAB5B-201ENST00000360299 ESCO1Q5FWF5 840 aa9.21□□□□□ -0.94
RAB5B-201ENST00000360299 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
RAB5B-201ENST00000360299 TARBP1Q13395 1621 aaKnown RBP9.21□□□□□ -0.94
RAB5B-201ENST00000360299 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
RAB5B-201ENST00000360299 MAPKBP1O60336 1514 aa9.2□□□□□ -0.94
RAB5B-201ENST00000360299 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
RAB5B-201ENST00000360299 MINK1Q8N4C8 1332 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-201ENST00000360299 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
RAB5B-201ENST00000360299 ARHGEF11O15085 1522 aa9.19□□□□□ -0.94
RAB5B-201ENST00000360299 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
RAB5B-201ENST00000360299 FYCO1Q9BQS8 1478 aa9.19□□□□□ -0.94
RAB5B-201ENST00000360299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
RAB5B-201ENST00000360299 RBM33Q96EV2 1170 aaKnown RBP9.18□□□□□ -0.94
RAB5B-201ENST00000360299 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
RAB5B-201ENST00000360299 SAMD9Q5K651 1589 aa9.18□□□□□ -0.94
RAB5B-201ENST00000360299 FANCAO15360 1455 aa9.17□□□□□ -0.94
RAB5B-201ENST00000360299 EIF3AQ14152 1382 aaKnown RBP9.17□□□□□ -0.94
RAB5B-201ENST00000360299 SYTL4Q96C24 671 aaPredicted RBP9.17□□□□□ -0.94
RAB5B-201ENST00000360299 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
RAB5B-201ENST00000360299 U2SURPO15042 1029 aaKnown RBP9.17□□□□□ -0.94
RAB5B-201ENST00000360299 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 PLEKHH2Q8IVE3 1493 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 L3MBTL2Q969R5 705 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
RAB5B-201ENST00000360299 CDK13Q14004 1512 aaKnown RBP9.16□□□□□ -0.94
RAB5B-201ENST00000360299 AMPHP49418 695 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 ADAMTS2O95450 1211 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 RALBP1Q15311 655 aa9.16□□□□□ -0.94
RAB5B-201ENST00000360299 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
RAB5B-201ENST00000360299 NUTM2GQ5VZR2 741 aa9.15□□□□□ -0.94
RAB5B-201ENST00000360299 CCDC144AA2RUR9 1427 aa9.15□□□□□ -0.94
RAB5B-201ENST00000360299 MS4A1P11836 297 aa9.15□□□□□ -0.95
RAB5B-201ENST00000360299 CHMP4BQ9H444 224 aaKnown RBP9.15□□□□□ -0.95
RAB5B-201ENST00000360299 STRN4Q9NRL3 753 aa9.15□□□□□ -0.95
RAB5B-201ENST00000360299 WDR7Q9Y4E6 1490 aa9.15□□□□□ -0.95
RAB5B-201ENST00000360299 PBRM1Q86U86 1689 aa9.15□□□□□ -0.95
RAB5B-201ENST00000360299 EIF5BO60841 1220 aaKnown RBP9.14□□□□□ -0.95
RAB5B-201ENST00000360299 PPP1R1BQ9UD71 204 aaPredicted RBP9.14□□□□□ -0.95
RAB5B-201ENST00000360299 LAS1LQ9Y4W2 734 aaKnown RBP9.14□□□□□ -0.95
RAB5B-201ENST00000360299 KTN1Q86UP2 1357 aaKnown RBP9.14□□□□□ -0.95
RAB5B-201ENST00000360299 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
RAB5B-201ENST00000360299 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
RAB5B-201ENST00000360299 NGLY1Q96IV0 654 aa9.13□□□□□ -0.95
RAB5B-201ENST00000360299 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
RAB5B-201ENST00000360299 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
RAB5B-201ENST00000360299 MAGI3Q5TCQ9 1506 aa9.12□□□□□ -0.95
RAB5B-201ENST00000360299 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
RAB5B-201ENST00000360299 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
RAB5B-201ENST00000360299 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
RAB5B-201ENST00000360299 MORC1Q86VD1 984 aa9.11□□□□□ -0.95
RAB5B-201ENST00000360299 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-201ENST00000360299 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
RAB5B-201ENST00000360299 HSP90AA1P07900 732 aaKnown RBP9.11□□□□□ -0.95
RAB5B-201ENST00000360299 NEUROD2Q15784 382 aa9.11□□□□□ -0.95
RAB5B-201ENST00000360299 ADAMTS12P58397 1594 aa9.11□□□□□ -0.95
RAB5B-201ENST00000360299 TMEM132EQ6IEE7 984 aa9.11□□□□□ -0.95
RAB5B-201ENST00000360299 SLC52A1Q9NWF4 448 aa9.1□□□□□ -0.95
RAB5B-201ENST00000360299 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
RAB5B-201ENST00000360299 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
RAB5B-201ENST00000360299 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
RAB5B-201ENST00000360299 PMFBP1Q8TBY8 1022 aa9.1□□□□□ -0.95
RAB5B-201ENST00000360299 PPP4R2Q9NY27 417 aa9.09□□□□□ -0.95
RAB5B-201ENST00000360299 CEP170Q5SW79 1584 aa9.09□□□□□ -0.95
RAB5B-201ENST00000360299 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
RAB5B-201ENST00000360299 ERICH6BQ5W0A0 696 aa9.09□□□□□ -0.95
RAB5B-201ENST00000360299 SUPT16HQ9Y5B9 1047 aaKnown RBP9.09□□□□□ -0.95
RAB5B-201ENST00000360299 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
RAB5B-201ENST00000360299 ANKRD50Q9ULJ7 1429 aa9.09□□□□□ -0.95
RAB5B-201ENST00000360299 C9orf84Q5VXU9 1444 aa9.08□□□□□ -0.96
RAB5B-201ENST00000360299 RTF1Q92541 710 aaKnown RBP9.08□□□□□ -0.96
RAB5B-201ENST00000360299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
RAB5B-201ENST00000360299 KIF14Q15058 1648 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 FTSJ3Q8IY81 847 aaKnown RBP9.07□□□□□ -0.96
RAB5B-201ENST00000360299 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 TNRQ92752 1358 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 UHRF1BP1Q6BDS2 1440 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 EHBP1L1Q8N3D4 1523 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 NUP160Q12769 1436 aa9.07□□□□□ -0.96
RAB5B-201ENST00000360299 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
RAB5B-201ENST00000360299 IRX6P78412 446 aaPredicted RBP9.06□□□□□ -0.96
RAB5B-201ENST00000360299 NLRP13Q86W25 1043 aa9.06□□□□□ -0.96
RAB5B-201ENST00000360299 PRDM11Q9NQV5 511 aa9.06□□□□□ -0.96
RAB5B-201ENST00000360299 CALD1Q05682 793 aaKnown RBP9.05□□□□□ -0.96
RAB5B-201ENST00000360299 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
RAB5B-201ENST00000360299 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
RAB5B-201ENST00000360299 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
RAB5B-201ENST00000360299 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
RAB5B-201ENST00000360299 COG3Q96JB2 828 aa9.05□□□□□ -0.96
RAB5B-201ENST00000360299 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
RAB5B-201ENST00000360299 SUPT6HQ7KZ85 1726 aaKnown RBP9.05□□□□□ -0.96
RAB5B-201ENST00000360299 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 NLRP6P59044 892 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 MSH6P52701 1360 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 PTPN23Q9H3S7 1636 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms