RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SPAG9O60271 1321 aaKnown RBP25.6■■□□□ 1.69
PDLIM7-203ENST00000359895 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
PDLIM7-203ENST00000359895 RALGAPBQ86X10 1494 aa25.59■■□□□ 1.69
PDLIM7-203ENST00000359895 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
PDLIM7-203ENST00000359895 CCDC144AA2RUR9 1427 aa25.57■■□□□ 1.68
PDLIM7-203ENST00000359895 CCDC7Q96M83 1385 aa25.57■■□□□ 1.68
PDLIM7-203ENST00000359895 CFAP74Q9C0B2 1584 aa25.56■■□□□ 1.68
PDLIM7-203ENST00000359895 ATP7AQ04656 1500 aa25.56■■□□□ 1.68
PDLIM7-203ENST00000359895 ATP10AO60312 1499 aa25.56■■□□□ 1.68
PDLIM7-203ENST00000359895 CNTLNQ9NXG0 1405 aa25.55■■□□□ 1.68
PDLIM7-203ENST00000359895 KDM5CP41229 1560 aa25.55■■□□□ 1.68
PDLIM7-203ENST00000359895 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
PDLIM7-203ENST00000359895 ADGRL1O94910 1474 aa25.54■■□□□ 1.68
PDLIM7-203ENST00000359895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.68
PDLIM7-203ENST00000359895 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
PDLIM7-203ENST00000359895 PLA2R1Q13018 1463 aa25.51■■□□□ 1.67
PDLIM7-203ENST00000359895 AFAP1Q8N556 730 aa25.5■■□□□ 1.67
PDLIM7-203ENST00000359895 SCAPERQ9BY12 1400 aa25.5■■□□□ 1.67
PDLIM7-203ENST00000359895 USP47Q96K76 1375 aa25.49■■□□□ 1.67
PDLIM7-203ENST00000359895 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
PDLIM7-203ENST00000359895 E9PCH4 1651 aa25.46■■□□□ 1.67
PDLIM7-203ENST00000359895 TET3O43151 1660 aa25.46■■□□□ 1.67
PDLIM7-203ENST00000359895 C11orf95C9JLR9 678 aaPredicted RBP25.45■■□□□ 1.66
PDLIM7-203ENST00000359895 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.66
PDLIM7-203ENST00000359895 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
PDLIM7-203ENST00000359895 ARID4BQ4LE39 1312 aaPredicted RBP25.45■■□□□ 1.66
PDLIM7-203ENST00000359895 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
PDLIM7-203ENST00000359895 TSPOAP1O95153 1857 aa25.44■■□□□ 1.66
PDLIM7-203ENST00000359895 BCORL1Q5H9F3 1711 aa25.44■■□□□ 1.66
PDLIM7-203ENST00000359895 KIF7Q2M1P5 1343 aa25.43■■□□□ 1.66
PDLIM7-203ENST00000359895 GLI2P10070 1586 aa25.43■■□□□ 1.66
PDLIM7-203ENST00000359895 VWDEQ8N2E2 1590 aa25.42■■□□□ 1.66
PDLIM7-203ENST00000359895 SPHKAPQ2M3C7 1700 aa25.42■■□□□ 1.66
PDLIM7-203ENST00000359895 KIDINS220Q9ULH0 1771 aa25.42■■□□□ 1.66
PDLIM7-203ENST00000359895 ZNF518AQ6AHZ1 1483 aa25.42■■□□□ 1.66
PDLIM7-203ENST00000359895 LAMC1P11047 1609 aa25.41■■□□□ 1.66
PDLIM7-203ENST00000359895 KDM2AQ9Y2K7 1162 aa25.4■■□□□ 1.66
PDLIM7-203ENST00000359895 KANK1Q14678 1352 aa25.4■■□□□ 1.66
PDLIM7-203ENST00000359895 PRAG1Q86YV5 1406 aa25.4■■□□□ 1.66
PDLIM7-203ENST00000359895 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
PDLIM7-203ENST00000359895 MAP3K4Q9Y6R4 1608 aa25.39■■□□□ 1.66
PDLIM7-203ENST00000359895 A2MP01023 1474 aa25.39■■□□□ 1.65
PDLIM7-203ENST00000359895 DHX29Q7Z478 1369 aaKnown RBP25.39■■□□□ 1.65
PDLIM7-203ENST00000359895 CARD11Q9BXL7 1154 aa25.39■■□□□ 1.65
PDLIM7-203ENST00000359895 CEP152O94986 1710 aa25.38■■□□□ 1.65
PDLIM7-203ENST00000359895 TRPM2O94759 1503 aa25.38■■□□□ 1.65
PDLIM7-203ENST00000359895 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
PDLIM7-203ENST00000359895 PPRC1Q5VV67 1664 aaKnown RBP25.35■■□□□ 1.65
PDLIM7-203ENST00000359895 ROCK2O75116 1388 aaKnown RBP25.34■■□□□ 1.65
PDLIM7-203ENST00000359895 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
PDLIM7-203ENST00000359895 PTPRTO14522 1441 aa25.33■■□□□ 1.65
PDLIM7-203ENST00000359895 MROH1Q8NDA8 1641 aa25.32■■□□□ 1.64
PDLIM7-203ENST00000359895 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
PDLIM7-203ENST00000359895 GPRASP1Q5JY77 1395 aa25.3■■□□□ 1.64
PDLIM7-203ENST00000359895 NEO1Q92859 1461 aa25.3■■□□□ 1.64
PDLIM7-203ENST00000359895 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
PDLIM7-203ENST00000359895 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
PDLIM7-203ENST00000359895 RGL3Q3MIN7 710 aa25.29■■□□□ 1.64
PDLIM7-203ENST00000359895 MLH3Q9UHC1 1453 aa25.29■■□□□ 1.64
PDLIM7-203ENST00000359895 NEURL4Q96JN8 1562 aa25.28■■□□□ 1.64
PDLIM7-203ENST00000359895 KIF3BO15066 747 aa25.28■■□□□ 1.64
PDLIM7-203ENST00000359895 PRKRIP1Q9H875 184 aaPredicted RBP25.27■■□□□ 1.64
PDLIM7-203ENST00000359895 CLTCL1P53675 1640 aa25.27■■□□□ 1.64
PDLIM7-203ENST00000359895 STAC3Q96MF2 364 aa25.27■■□□□ 1.64
PDLIM7-203ENST00000359895 LMTK2Q8IWU2 1503 aa25.25■■□□□ 1.63
PDLIM7-203ENST00000359895 EFCAB6Q5THR3 1501 aa25.23■■□□□ 1.63
PDLIM7-203ENST00000359895 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
PDLIM7-203ENST00000359895 MADDQ8WXG6 1647 aa25.22■■□□□ 1.63
PDLIM7-203ENST00000359895 KIF1BO60333 1816 aa25.21■■□□□ 1.63
PDLIM7-203ENST00000359895 ABCA6Q8N139 1617 aa25.18■■□□□ 1.62
PDLIM7-203ENST00000359895 FRMPD1Q5SYB0 1578 aa25.16■■□□□ 1.62
PDLIM7-203ENST00000359895 KIAA1210Q9ULL0 1709 aa25.16■■□□□ 1.62
PDLIM7-203ENST00000359895 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
PDLIM7-203ENST00000359895 NBPF1Q3BBV0 1214 aa25.14■■□□□ 1.62
PDLIM7-203ENST00000359895 POLR3GLQ9BT43 218 aa25.14■■□□□ 1.62
PDLIM7-203ENST00000359895 IQGAP1P46940 1657 aa25.13■■□□□ 1.61
PDLIM7-203ENST00000359895 IFT172Q9UG01 1749 aa25.1■■□□□ 1.61
PDLIM7-203ENST00000359895 COL17A1Q9UMD9 1497 aaPredicted RBP25.1■■□□□ 1.61
PDLIM7-203ENST00000359895 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
PDLIM7-203ENST00000359895 DIP2CQ9Y2E4 1556 aa25.09■■□□□ 1.61
PDLIM7-203ENST00000359895 KTN1Q86UP2 1357 aaKnown RBP25.08■■□□□ 1.61
PDLIM7-203ENST00000359895 MYOM2P54296 1465 aa25.07■■□□□ 1.6
PDLIM7-203ENST00000359895 HNRNPUQ00839 825 aaKnown RBP eCLIP25.05■■□□□ 1.6
PDLIM7-203ENST00000359895 CCDC184Q52MB2 194 aa25.04■■□□□ 1.6
PDLIM7-203ENST00000359895 CAMSAP1Q5T5Y3 1602 aa25.03■■□□□ 1.6
PDLIM7-203ENST00000359895 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
PDLIM7-203ENST00000359895 MROH2AA6NES4 1674 aa25.03■■□□□ 1.6
PDLIM7-203ENST00000359895 ZC3H13Q5T200 1668 aaKnown RBP25.03■■□□□ 1.6
PDLIM7-203ENST00000359895 ABCC3O15438 1527 aa25.03■■□□□ 1.6
PDLIM7-203ENST00000359895 TESK2Q96S53 571 aa25.01■■□□□ 1.59
PDLIM7-203ENST00000359895 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
PDLIM7-203ENST00000359895 SCAF11Q99590 1463 aaKnown RBP25■■□□□ 1.59
PDLIM7-203ENST00000359895 ADGRB3O60242 1522 aa25■■□□□ 1.59
PDLIM7-203ENST00000359895 TMF1P82094 1093 aa25■■□□□ 1.59
PDLIM7-203ENST00000359895 RAPGEF3O95398 923 aa24.99■■□□□ 1.59
PDLIM7-203ENST00000359895 NPATQ14207 1427 aa24.98■■□□□ 1.59
PDLIM7-203ENST00000359895 CFAP65Q6ZU64 1925 aaKnown RBP24.98■■□□□ 1.59
PDLIM7-203ENST00000359895 ZMYM4Q5VZL5 1548 aa24.97■■□□□ 1.59
PDLIM7-203ENST00000359895 RALBP1Q15311 655 aa24.97■■□□□ 1.59
PDLIM7-203ENST00000359895 GGT6Q6P531 493 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms