RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
HHLA3-201ENST00000359875 CLIP1P30622 1438 aa10.95□□□□□ -0.66
HHLA3-201ENST00000359875 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
HHLA3-201ENST00000359875 KIF14Q15058 1648 aa10.94□□□□□ -0.66
HHLA3-201ENST00000359875 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
HHLA3-201ENST00000359875 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
HHLA3-201ENST00000359875 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
HHLA3-201ENST00000359875 MYO5CQ9NQX4 1742 aa10.92□□□□□ -0.66
HHLA3-201ENST00000359875 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
HHLA3-201ENST00000359875 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
HHLA3-201ENST00000359875 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
HHLA3-201ENST00000359875 PCF11O94913 1555 aaKnown RBP10.91□□□□□ -0.66
HHLA3-201ENST00000359875 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
HHLA3-201ENST00000359875 ZNF518AQ6AHZ1 1483 aa10.91□□□□□ -0.66
HHLA3-201ENST00000359875 YEATS2Q9ULM3 1422 aa10.91□□□□□ -0.66
HHLA3-201ENST00000359875 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
HHLA3-201ENST00000359875 CASKIN1Q8WXD9 1431 aa10.9□□□□□ -0.66
HHLA3-201ENST00000359875 ATP10AO60312 1499 aa10.89□□□□□ -0.67
HHLA3-201ENST00000359875 LMTK3Q96Q04 1460 aa10.89□□□□□ -0.67
HHLA3-201ENST00000359875 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
HHLA3-201ENST00000359875 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
HHLA3-201ENST00000359875 C9orf84Q5VXU9 1444 aa10.89□□□□□ -0.67
HHLA3-201ENST00000359875 ARHGAP5Q13017 1502 aa10.89□□□□□ -0.67
HHLA3-201ENST00000359875 KDM5CP41229 1560 aa10.88□□□□□ -0.67
HHLA3-201ENST00000359875 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
HHLA3-201ENST00000359875 RIMS1Q86UR5 1692 aaKnown RBP10.88□□□□□ -0.67
HHLA3-201ENST00000359875 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
HHLA3-201ENST00000359875 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
HHLA3-201ENST00000359875 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
HHLA3-201ENST00000359875 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
HHLA3-201ENST00000359875 ARHGEF12Q9NZN5 1544 aa10.86□□□□□ -0.67
HHLA3-201ENST00000359875 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
HHLA3-201ENST00000359875 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
HHLA3-201ENST00000359875 PYGBP11216 843 aa10.85□□□□□ -0.67
HHLA3-201ENST00000359875 MLH3Q9UHC1 1453 aa10.85□□□□□ -0.67
HHLA3-201ENST00000359875 PREX2Q70Z35 1606 aa10.84□□□□□ -0.67
HHLA3-201ENST00000359875 LRRIQ1Q96JM4 1722 aa10.84□□□□□ -0.67
HHLA3-201ENST00000359875 IER5LQ5T953 404 aa10.84□□□□□ -0.67
HHLA3-201ENST00000359875 SIGLEC1Q9BZZ2 1709 aa10.84□□□□□ -0.67
HHLA3-201ENST00000359875 FER1L4A9Z1Z3 1794 aa10.83□□□□□ -0.68
HHLA3-201ENST00000359875 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
HHLA3-201ENST00000359875 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
HHLA3-201ENST00000359875 ABCC1P33527 1531 aa10.83□□□□□ -0.68
HHLA3-201ENST00000359875 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
HHLA3-201ENST00000359875 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
HHLA3-201ENST00000359875 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
HHLA3-201ENST00000359875 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
HHLA3-201ENST00000359875 AGLP35573 1532 aa10.81□□□□□ -0.68
HHLA3-201ENST00000359875 MLECQ14165 292 aa10.81□□□□□ -0.68
HHLA3-201ENST00000359875 AFAP1Q8N556 730 aa10.81□□□□□ -0.68
HHLA3-201ENST00000359875 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
HHLA3-201ENST00000359875 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
HHLA3-201ENST00000359875 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
HHLA3-201ENST00000359875 ITSN2Q9NZM3 1697 aa10.79□□□□□ -0.68
HHLA3-201ENST00000359875 TRAPPC8Q9Y2L5 1435 aa10.78□□□□□ -0.68
HHLA3-201ENST00000359875 ABCA6Q8N139 1617 aa10.78□□□□□ -0.68
HHLA3-201ENST00000359875 SEC24BO95487 1268 aa10.78□□□□□ -0.68
HHLA3-201ENST00000359875 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
HHLA3-201ENST00000359875 PLEKHH2Q8IVE3 1493 aa10.78□□□□□ -0.68
HHLA3-201ENST00000359875 PREX1Q8TCU6 1659 aa10.78□□□□□ -0.68
HHLA3-201ENST00000359875 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.69
HHLA3-201ENST00000359875 GPATCH8Q9UKJ3 1502 aaKnown RBP10.77□□□□□ -0.69
HHLA3-201ENST00000359875 CNTLNQ9NXG0 1405 aa10.76□□□□□ -0.69
HHLA3-201ENST00000359875 KIAA1107Q9UPP5 1409 aa10.76□□□□□ -0.69
HHLA3-201ENST00000359875 HSPA2P54652 639 aa10.76□□□□□ -0.69
HHLA3-201ENST00000359875 ESF1Q9H501 851 aaKnown RBP10.76□□□□□ -0.69
HHLA3-201ENST00000359875 UHRF1BP1Q6BDS2 1440 aa10.75□□□□□ -0.69
HHLA3-201ENST00000359875 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
HHLA3-201ENST00000359875 KIDINS220Q9ULH0 1771 aa10.75□□□□□ -0.69
HHLA3-201ENST00000359875 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
HHLA3-201ENST00000359875 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
HHLA3-201ENST00000359875 MTUS2Q5JR59 1369 aa10.74□□□□□ -0.69
HHLA3-201ENST00000359875 SYCP2Q9BX26 1530 aa10.74□□□□□ -0.69
HHLA3-201ENST00000359875 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
HHLA3-201ENST00000359875 SCUBE2Q9NQ36 999 aa10.73□□□□□ -0.69
HHLA3-201ENST00000359875 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
HHLA3-201ENST00000359875 SPAG9O60271 1321 aaKnown RBP10.73□□□□□ -0.69
HHLA3-201ENST00000359875 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
HHLA3-201ENST00000359875 CEBPAP49715 358 aaPredicted RBP10.72□□□□□ -0.69
HHLA3-201ENST00000359875 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
HHLA3-201ENST00000359875 ATP7AQ04656 1500 aa10.71□□□□□ -0.69
HHLA3-201ENST00000359875 NPATQ14207 1427 aa10.71□□□□□ -0.69
HHLA3-201ENST00000359875 ZNF777Q9ULD5 760 aaPredicted RBP10.71□□□□□ -0.69
HHLA3-201ENST00000359875 SETD1BQ9UPS6 1966 aaKnown RBP10.71□□□□□ -0.69
HHLA3-201ENST00000359875 MROH2AA6NES4 1674 aa10.7□□□□□ -0.7
HHLA3-201ENST00000359875 C3P01024 1663 aa10.7□□□□□ -0.7
HHLA3-201ENST00000359875 INO80Q9ULG1 1556 aaPredicted RBP10.7□□□□□ -0.7
HHLA3-201ENST00000359875 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
HHLA3-201ENST00000359875 PLXNC1O60486 1568 aa10.69□□□□□ -0.7
HHLA3-201ENST00000359875 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
HHLA3-201ENST00000359875 A2MP01023 1474 aa10.68□□□□□ -0.7
HHLA3-201ENST00000359875 PTPRTO14522 1441 aa10.68□□□□□ -0.7
HHLA3-201ENST00000359875 PLCG2P16885 1265 aa10.68□□□□□ -0.7
HHLA3-201ENST00000359875 HNRNPMP52272 730 aaKnown RBP eCLIP10.68□□□□□ -0.7
HHLA3-201ENST00000359875 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
HHLA3-201ENST00000359875 RTEL1-TNFRSF6BF6WH68 1400 aa10.67□□□□□ -0.7
HHLA3-201ENST00000359875 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
HHLA3-201ENST00000359875 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
HHLA3-201ENST00000359875 POTEFA5A3E0 1075 aa10.66□□□□□ -0.7
HHLA3-201ENST00000359875 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms