RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 KDM5DQ9BY66 1539 aa43.77■■■■■ 4.6
LFNG-203ENST00000359574 WASHC2CQ9Y4E1 1318 aa43.75■■■■■ 4.59
LFNG-203ENST00000359574 FAM135AQ9P2D6 1515 aa43.73■■■■■ 4.59
LFNG-203ENST00000359574 CEP170BQ9Y4F5 1589 aaPredicted RBP43.72■■■■■ 4.59
LFNG-203ENST00000359574 FBXO31Q5XUX0 539 aaPredicted RBP43.71■■■■■ 4.59
LFNG-203ENST00000359574 ZNF142P52746 1687 aaPredicted RBP43.71■■■■■ 4.59
LFNG-203ENST00000359574 PZPP20742 1482 aa43.68■■■■■ 4.58
LFNG-203ENST00000359574 NCKAP5LQ9HCH0 1330 aa43.68■■■■■ 4.58
LFNG-203ENST00000359574 TNRQ92752 1358 aa43.64■■■■■ 4.58
LFNG-203ENST00000359574 ABCC5O15440 1437 aa43.63■■■■■ 4.58
LFNG-203ENST00000359574 PLA2R1Q13018 1463 aa43.63■■■■■ 4.57
LFNG-203ENST00000359574 A2ML1A8K2U0 1454 aa43.62■■■■■ 4.57
LFNG-203ENST00000359574 PTPN23Q9H3S7 1636 aa43.62■■■■■ 4.57
LFNG-203ENST00000359574 FGD6Q6ZV73 1430 aa43.62■■■■■ 4.57
LFNG-203ENST00000359574 RNF17Q9BXT8 1623 aaKnown RBP43.6■■■■■ 4.57
LFNG-203ENST00000359574 PKD2Q13563 968 aa43.58■■■■■ 4.57
LFNG-203ENST00000359574 TCOF1Q13428 1488 aaKnown RBP43.57■■■■■ 4.57
LFNG-203ENST00000359574 SHANK2Q9UPX8 1470 aa43.57■■■■■ 4.57
LFNG-203ENST00000359574 DUOX2Q9NRD8 1548 aa43.55■■■■■ 4.56
LFNG-203ENST00000359574 EIF2AK4Q9P2K8 1649 aaKnown RBP43.54■■■■■ 4.56
LFNG-203ENST00000359574 KIF15Q9NS87 1388 aa43.54■■■■■ 4.56
LFNG-203ENST00000359574 ABCC3O15438 1527 aa43.54■■■■■ 4.56
LFNG-203ENST00000359574 DAPK1P53355 1430 aa43.53■■■■■ 4.56
LFNG-203ENST00000359574 DNMT1P26358 1616 aaKnown RBP43.52■■■■■ 4.56
LFNG-203ENST00000359574 LTBP4Q8N2S1 1624 aa43.51■■■■■ 4.56
LFNG-203ENST00000359574 RRP7BPQ9NSQ0 103 aa43.51■■■■■ 4.56
LFNG-203ENST00000359574 MROH1Q8NDA8 1641 aa43.49■■■■■ 4.55
LFNG-203ENST00000359574 CROCC2H7BZ55 1655 aa43.48■■■■■ 4.55
LFNG-203ENST00000359574 ERBINQ96RT1 1412 aa43.42■■■■■ 4.54
LFNG-203ENST00000359574 NLRP1Q9C000 1473 aa43.42■■■■■ 4.54
LFNG-203ENST00000359574 ZNF335Q9H4Z2 1342 aaPredicted RBP43.42■■■■■ 4.54
LFNG-203ENST00000359574 ZC3H13Q5T200 1668 aaKnown RBP43.42■■■■■ 4.54
LFNG-203ENST00000359574 CHIC2Q9UKJ5 165 aa43.4■■■■■ 4.54
LFNG-203ENST00000359574 ERVK-7P63135 1459 aa43.36■■■■■ 4.53
LFNG-203ENST00000359574 SPATA31D1Q6ZQQ2 1576 aa43.35■■■■■ 4.53
LFNG-203ENST00000359574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.34■■■■■ 4.53
LFNG-203ENST00000359574 ANKRD30AQ9BXX3 1397 aa43.34■■■■■ 4.53
LFNG-203ENST00000359574 PRDM15P57071 1507 aaPredicted RBP43.33■■■■■ 4.53
LFNG-203ENST00000359574 THEMISQ8N1K5 641 aaPredicted RBP43.32■■■■■ 4.53
LFNG-203ENST00000359574 UGGT1Q9NYU2 1555 aa43.32■■■■■ 4.53
LFNG-203ENST00000359574 FAM50AQ14320 339 aaKnown RBP43.3■■■■■ 4.52
LFNG-203ENST00000359574 CEP152O94986 1710 aa43.3■■■■■ 4.52
LFNG-203ENST00000359574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.29■■■■■ 4.52
LFNG-203ENST00000359574 IQSEC2Q5JU85 1478 aa43.28■■■■■ 4.52
LFNG-203ENST00000359574 NEURL4Q96JN8 1562 aa43.27■■■■■ 4.52
LFNG-203ENST00000359574 ANKLE2Q86XL3 938 aa43.27■■■■■ 4.52
LFNG-203ENST00000359574 ARHGAP31Q2M1Z3 1444 aa43.23■■■■■ 4.51
LFNG-203ENST00000359574 ADGRL2O95490 1459 aa43.2■■■■■ 4.51
LFNG-203ENST00000359574 DEPDC5O75140 1603 aa43.19■■■■■ 4.51
LFNG-203ENST00000359574 POLR1AO95602 1720 aaPredicted RBP43.19■■■■■ 4.5
LFNG-203ENST00000359574 KANK1Q14678 1352 aa43.18■■■■■ 4.5
LFNG-203ENST00000359574 NPHP4O75161 1426 aaPredicted RBP43.13■■■■■ 4.49
LFNG-203ENST00000359574 MED14O60244 1454 aa43.11■■■■■ 4.49
LFNG-203ENST00000359574 VWDEQ8N2E2 1590 aa43.09■■■■■ 4.49
LFNG-203ENST00000359574 LMTK2Q8IWU2 1503 aa43.07■■■■■ 4.49
LFNG-203ENST00000359574 CFAP65Q6ZU64 1925 aaKnown RBP43.06■■■■■ 4.48
LFNG-203ENST00000359574 ANKRD50Q9ULJ7 1429 aa43.03■■■■■ 4.48
LFNG-203ENST00000359574 UBAP1LF5GYI3 381 aa43.02■■■■■ 4.48
LFNG-203ENST00000359574 UBR1Q8IWV7 1749 aa43.01■■■■■ 4.48
LFNG-203ENST00000359574 PPARGC1BQ86YN6 1023 aaKnown RBP42.99■■■■■ 4.47
LFNG-203ENST00000359574 CPS1P31327 1500 aa42.97■■■■■ 4.47
LFNG-203ENST00000359574 IQGAP1P46940 1657 aa42.96■■■■■ 4.47
LFNG-203ENST00000359574 SCAF11Q99590 1463 aaKnown RBP42.94■■■■■ 4.46
LFNG-203ENST00000359574 ARHGAP23Q9P227 1491 aa42.94■■■■■ 4.46
LFNG-203ENST00000359574 EFCAB6Q5THR3 1501 aa42.93■■■■■ 4.46
LFNG-203ENST00000359574 LTKP29376 864 aa42.93■■■■■ 4.46
LFNG-203ENST00000359574 SLIT1O75093 1534 aa42.92■■■■■ 4.46
LFNG-203ENST00000359574 IDI1Q13907 227 aa42.9■■■■■ 4.46
LFNG-203ENST00000359574 TXNDC2Q86VQ3 553 aa42.9■■■■■ 4.46
LFNG-203ENST00000359574 PIK3C2BO00750 1634 aa42.89■■■■■ 4.46
LFNG-203ENST00000359574 NOS1P29475 1434 aa42.89■■■■■ 4.46
LFNG-203ENST00000359574 STAG3Q9UJ98 1225 aa42.87■■■■■ 4.45
LFNG-203ENST00000359574 ROCK1Q13464 1354 aa42.86■■■■■ 4.45
LFNG-203ENST00000359574 SYNMO15061 1565 aa42.86■■■■■ 4.45
LFNG-203ENST00000359574 TMEM2Q9UHN6 1383 aa42.85■■■■■ 4.45
LFNG-203ENST00000359574 EID1Q9Y6B2 187 aa42.82■■■■■ 4.45
LFNG-203ENST00000359574 ITGAEP38570 1179 aa42.8■■■■■ 4.44
LFNG-203ENST00000359574 RPRD2Q5VT52 1461 aaKnown RBP42.78■■■■■ 4.44
LFNG-203ENST00000359574 SLC52A1Q9NWF4 448 aa42.75■■■■■ 4.43
LFNG-203ENST00000359574 UNC13BO14795 1591 aa42.73■■■■■ 4.43
LFNG-203ENST00000359574 TOM1O60784 492 aa42.73■■■■■ 4.43
LFNG-203ENST00000359574 PIP4K2BP78356 416 aa42.71■■■■■ 4.43
LFNG-203ENST00000359574 TET3O43151 1660 aa42.71■■■■■ 4.43
LFNG-203ENST00000359574 KDM5AP29375 1690 aaKnown RBP42.71■■■■■ 4.43
LFNG-203ENST00000359574 STRCP1A6NGW2 1772 aa42.71■■■■■ 4.43
LFNG-203ENST00000359574 SCAF1Q9H7N4 1312 aaKnown RBP42.7■■■■■ 4.43
LFNG-203ENST00000359574 LRRC7Q96NW7 1537 aa42.7■■■■■ 4.43
LFNG-203ENST00000359574 DISP3Q9P2K9 1392 aa42.7■■■■■ 4.43
LFNG-203ENST00000359574 ADGRB3O60242 1522 aa42.69■■■■■ 4.43
LFNG-203ENST00000359574 ALKQ9UM73 1620 aa42.6■■■■■ 4.41
LFNG-203ENST00000359574 NUP155O75694 1391 aa42.6■■■■■ 4.41
LFNG-203ENST00000359574 GCC2Q8IWJ2 1684 aa42.58■■■■■ 4.41
LFNG-203ENST00000359574 HSPA1LP34931 641 aa42.57■■■■■ 4.41
LFNG-203ENST00000359574 IQGAP3Q86VI3 1631 aa42.55■■■■■ 4.4
LFNG-203ENST00000359574 RRBP1Q9P2E9 1410 aaKnown RBP42.55■■■■■ 4.4
LFNG-203ENST00000359574 SLC26A8Q96RN1 970 aa42.54■■■■■ 4.4
LFNG-203ENST00000359574 E9PCH4 1651 aa42.52■■■■■ 4.4
LFNG-203ENST00000359574 ZFYVE9O95405 1425 aa42.51■■■■■ 4.4
LFNG-203ENST00000359574 RIMS2Q9UQ26 1411 aa42.46■■■■■ 4.39
LFNG-203ENST00000359574 TMEM131LA2VDJ0 1609 aa42.46■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms