RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
GABPB1-202ENST00000359031 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
GABPB1-202ENST00000359031 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
GABPB1-202ENST00000359031 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
GABPB1-202ENST00000359031 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
GABPB1-202ENST00000359031 CCER2I3L3R5 266 aa20.92■□□□□ 0.94
GABPB1-202ENST00000359031 ANP32CO43423 234 aa20.92■□□□□ 0.94
GABPB1-202ENST00000359031 ZFYVE16Q7Z3T8 1539 aa20.91■□□□□ 0.94
GABPB1-202ENST00000359031 RTEL1-TNFRSF6BF6WH68 1400 aa20.91■□□□□ 0.94
GABPB1-202ENST00000359031 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
GABPB1-202ENST00000359031 TRAPPC8Q9Y2L5 1435 aa20.89■□□□□ 0.94
GABPB1-202ENST00000359031 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.93
GABPB1-202ENST00000359031 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
GABPB1-202ENST00000359031 INO80Q9ULG1 1556 aaPredicted RBP20.88■□□□□ 0.93
GABPB1-202ENST00000359031 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
GABPB1-202ENST00000359031 KDM5CP41229 1560 aa20.86■□□□□ 0.93
GABPB1-202ENST00000359031 FANCAO15360 1455 aa20.86■□□□□ 0.93
GABPB1-202ENST00000359031 FBXO41Q8TF61 875 aa20.85■□□□□ 0.93
GABPB1-202ENST00000359031 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
GABPB1-202ENST00000359031 DEPDC5O75140 1603 aa20.84■□□□□ 0.93
GABPB1-202ENST00000359031 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
GABPB1-202ENST00000359031 ATP10AO60312 1499 aa20.82■□□□□ 0.92
GABPB1-202ENST00000359031 ATP7AQ04656 1500 aa20.82■□□□□ 0.92
GABPB1-202ENST00000359031 CFAP74Q9C0B2 1584 aa20.82■□□□□ 0.92
GABPB1-202ENST00000359031 PTPRMP28827 1452 aa20.81■□□□□ 0.92
GABPB1-202ENST00000359031 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
GABPB1-202ENST00000359031 SPAG9O60271 1321 aaKnown RBP20.8■□□□□ 0.92
GABPB1-202ENST00000359031 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
GABPB1-202ENST00000359031 USP47Q96K76 1375 aa20.79■□□□□ 0.92
GABPB1-202ENST00000359031 RAPGEF3O95398 923 aa20.78■□□□□ 0.92
GABPB1-202ENST00000359031 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
GABPB1-202ENST00000359031 ADAMTSL3P82987 1691 aa20.77■□□□□ 0.91
GABPB1-202ENST00000359031 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
GABPB1-202ENST00000359031 BCORL1Q5H9F3 1711 aa20.76■□□□□ 0.91
GABPB1-202ENST00000359031 E9PCH4 1651 aa20.74■□□□□ 0.91
GABPB1-202ENST00000359031 TET3O43151 1660 aa20.74■□□□□ 0.91
GABPB1-202ENST00000359031 LAMC1P11047 1609 aa20.74■□□□□ 0.91
GABPB1-202ENST00000359031 NEO1Q92859 1461 aa20.74■□□□□ 0.91
GABPB1-202ENST00000359031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
GABPB1-202ENST00000359031 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
GABPB1-202ENST00000359031 KIF7Q2M1P5 1343 aa20.72■□□□□ 0.91
GABPB1-202ENST00000359031 C11orf95C9JLR9 678 aaPredicted RBP20.72■□□□□ 0.91
GABPB1-202ENST00000359031 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
GABPB1-202ENST00000359031 SCAPERQ9BY12 1400 aa20.72■□□□□ 0.91
GABPB1-202ENST00000359031 SPHKAPQ2M3C7 1700 aa20.72■□□□□ 0.91
GABPB1-202ENST00000359031 PRAG1Q86YV5 1406 aa20.71■□□□□ 0.91
GABPB1-202ENST00000359031 A2MP01023 1474 aa20.71■□□□□ 0.91
GABPB1-202ENST00000359031 MADDQ8WXG6 1647 aa20.7■□□□□ 0.9
GABPB1-202ENST00000359031 TRPM2O94759 1503 aa20.7■□□□□ 0.9
GABPB1-202ENST00000359031 PRDM15P57071 1507 aaPredicted RBP20.7■□□□□ 0.9
GABPB1-202ENST00000359031 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
GABPB1-202ENST00000359031 CEP152O94986 1710 aa20.69■□□□□ 0.9
GABPB1-202ENST00000359031 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
GABPB1-202ENST00000359031 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
GABPB1-202ENST00000359031 FRMPD1Q5SYB0 1578 aa20.67■□□□□ 0.9
GABPB1-202ENST00000359031 DCAF11Q8TEB1 546 aa20.67■□□□□ 0.9
GABPB1-202ENST00000359031 MROH1Q8NDA8 1641 aa20.66■□□□□ 0.9
GABPB1-202ENST00000359031 LMTK3Q96Q04 1460 aa20.65■□□□□ 0.9
GABPB1-202ENST00000359031 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
GABPB1-202ENST00000359031 CARD11Q9BXL7 1154 aa20.65■□□□□ 0.9
GABPB1-202ENST00000359031 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.89
GABPB1-202ENST00000359031 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.89
GABPB1-202ENST00000359031 KANK1Q14678 1352 aa20.64■□□□□ 0.89
GABPB1-202ENST00000359031 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.89
GABPB1-202ENST00000359031 DHX29Q7Z478 1369 aaKnown RBP20.63■□□□□ 0.89
GABPB1-202ENST00000359031 PTPRTO14522 1441 aa20.63■□□□□ 0.89
GABPB1-202ENST00000359031 RIMS1Q86UR5 1692 aaKnown RBP20.63■□□□□ 0.89
GABPB1-202ENST00000359031 KDM2AQ9Y2K7 1162 aa20.63■□□□□ 0.89
GABPB1-202ENST00000359031 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
GABPB1-202ENST00000359031 POGZQ7Z3K3 1410 aa20.62■□□□□ 0.89
GABPB1-202ENST00000359031 NEURL4Q96JN8 1562 aa20.62■□□□□ 0.89
GABPB1-202ENST00000359031 CLTCL1P53675 1640 aa20.61■□□□□ 0.89
GABPB1-202ENST00000359031 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
GABPB1-202ENST00000359031 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
GABPB1-202ENST00000359031 LMTK2Q8IWU2 1503 aa20.58■□□□□ 0.88
GABPB1-202ENST00000359031 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.88
GABPB1-202ENST00000359031 HSPA2P54652 639 aa20.56■□□□□ 0.88
GABPB1-202ENST00000359031 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
GABPB1-202ENST00000359031 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
GABPB1-202ENST00000359031 MYT1LQ9UL68 1186 aa20.53■□□□□ 0.88
GABPB1-202ENST00000359031 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
GABPB1-202ENST00000359031 KIF3BO15066 747 aa20.52■□□□□ 0.88
GABPB1-202ENST00000359031 MLECQ14165 292 aa20.52■□□□□ 0.88
GABPB1-202ENST00000359031 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
GABPB1-202ENST00000359031 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
GABPB1-202ENST00000359031 KIAA1210Q9ULL0 1709 aa20.51■□□□□ 0.87
GABPB1-202ENST00000359031 IQGAP1P46940 1657 aa20.5■□□□□ 0.87
GABPB1-202ENST00000359031 KIF1BO60333 1816 aa20.5■□□□□ 0.87
GABPB1-202ENST00000359031 ZMYM4Q5VZL5 1548 aa20.49■□□□□ 0.87
GABPB1-202ENST00000359031 YEATS2Q9ULM3 1422 aa20.49■□□□□ 0.87
GABPB1-202ENST00000359031 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
GABPB1-202ENST00000359031 CERKQ8TCT0 537 aa20.45■□□□□ 0.87
GABPB1-202ENST00000359031 MYOM2P54296 1465 aa20.45■□□□□ 0.86
GABPB1-202ENST00000359031 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.86
GABPB1-202ENST00000359031 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
GABPB1-202ENST00000359031 NBPF1Q3BBV0 1214 aa20.44■□□□□ 0.86
GABPB1-202ENST00000359031 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
GABPB1-202ENST00000359031 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
GABPB1-202ENST00000359031 DIP2CQ9Y2E4 1556 aa20.43■□□□□ 0.86
GABPB1-202ENST00000359031 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms