RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 TRPM1Q7Z4N2 1603 aa9.78□□□□□ -0.84
KCNIP4-201ENST00000359001 E9PCH4 1651 aa9.78□□□□□ -0.84
KCNIP4-201ENST00000359001 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
KCNIP4-201ENST00000359001 ABCC1P33527 1531 aa9.77□□□□□ -0.85
KCNIP4-201ENST00000359001 PLA2R1Q13018 1463 aa9.76□□□□□ -0.85
KCNIP4-201ENST00000359001 DUOX2Q9NRD8 1548 aa9.76□□□□□ -0.85
KCNIP4-201ENST00000359001 HNRNPUQ00839 825 aaKnown RBP eCLIP9.76□□□□□ -0.85
KCNIP4-201ENST00000359001 LAMC1P11047 1609 aa9.76□□□□□ -0.85
KCNIP4-201ENST00000359001 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
KCNIP4-201ENST00000359001 PLCH2O75038 1416 aa9.75□□□□□ -0.85
KCNIP4-201ENST00000359001 ATP10AO60312 1499 aa9.75□□□□□ -0.85
KCNIP4-201ENST00000359001 ARAP3Q8WWN8 1544 aa9.75□□□□□ -0.85
KCNIP4-201ENST00000359001 ERBINQ96RT1 1412 aa9.75□□□□□ -0.85
KCNIP4-201ENST00000359001 PRAG1Q86YV5 1406 aa9.74□□□□□ -0.85
KCNIP4-201ENST00000359001 NEFLP07196 543 aa9.74□□□□□ -0.85
KCNIP4-201ENST00000359001 ROCK2O75116 1388 aaKnown RBP9.74□□□□□ -0.85
KCNIP4-201ENST00000359001 BCANQ96GW7 911 aa9.73□□□□□ -0.85
KCNIP4-201ENST00000359001 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
KCNIP4-201ENST00000359001 A2MP01023 1474 aa9.72□□□□□ -0.85
KCNIP4-201ENST00000359001 ZNF326Q5BKZ1 582 aaKnown RBP9.72□□□□□ -0.85
KCNIP4-201ENST00000359001 MRS2Q9HD23 443 aa9.72□□□□□ -0.85
KCNIP4-201ENST00000359001 GPRASP1Q5JY77 1395 aa9.72□□□□□ -0.85
KCNIP4-201ENST00000359001 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.85
KCNIP4-201ENST00000359001 ZBED9Q6R2W3 1325 aa9.71□□□□□ -0.85
KCNIP4-201ENST00000359001 RNF17Q9BXT8 1623 aaKnown RBP9.71□□□□□ -0.86
KCNIP4-201ENST00000359001 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.86
KCNIP4-201ENST00000359001 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
KCNIP4-201ENST00000359001 ZFYVE16Q7Z3T8 1539 aa9.7□□□□□ -0.86
KCNIP4-201ENST00000359001 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
KCNIP4-201ENST00000359001 TRAPPC8Q9Y2L5 1435 aa9.7□□□□□ -0.86
KCNIP4-201ENST00000359001 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
KCNIP4-201ENST00000359001 DCAF11Q8TEB1 546 aa9.68□□□□□ -0.86
KCNIP4-201ENST00000359001 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
KCNIP4-201ENST00000359001 INO80Q9ULG1 1556 aaPredicted RBP9.68□□□□□ -0.86
KCNIP4-201ENST00000359001 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 CEP152O94986 1710 aa9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
KCNIP4-201ENST00000359001 TRPM2O94759 1503 aa9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 VWDEQ8N2E2 1590 aa9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 KTN1Q86UP2 1357 aaKnown RBP9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 SPHKAPQ2M3C7 1700 aa9.66□□□□□ -0.86
KCNIP4-201ENST00000359001 ERICH6BQ5W0A0 696 aa9.65□□□□□ -0.86
KCNIP4-201ENST00000359001 TET3O43151 1660 aa9.65□□□□□ -0.86
KCNIP4-201ENST00000359001 LRPPRCP42704 1394 aaKnown RBP9.64□□□□□ -0.87
KCNIP4-201ENST00000359001 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
KCNIP4-201ENST00000359001 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
KCNIP4-201ENST00000359001 ATP7AQ04656 1500 aa9.64□□□□□ -0.87
KCNIP4-201ENST00000359001 PTPRTO14522 1441 aa9.64□□□□□ -0.87
KCNIP4-201ENST00000359001 CLTCL1P53675 1640 aa9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 PNISRQ8TF01 805 aaKnown RBP9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
KCNIP4-201ENST00000359001 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
KCNIP4-201ENST00000359001 NBPF1Q3BBV0 1214 aa9.62□□□□□ -0.87
KCNIP4-201ENST00000359001 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
KCNIP4-201ENST00000359001 TESK2Q96S53 571 aa9.61□□□□□ -0.87
KCNIP4-201ENST00000359001 FANCAO15360 1455 aa9.61□□□□□ -0.87
KCNIP4-201ENST00000359001 MYBBP1AQ9BQG0 1328 aaKnown RBP9.61□□□□□ -0.87
KCNIP4-201ENST00000359001 RALBP1Q15311 655 aa9.61□□□□□ -0.87
KCNIP4-201ENST00000359001 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
KCNIP4-201ENST00000359001 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
KCNIP4-201ENST00000359001 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
KCNIP4-201ENST00000359001 KIAA1210Q9ULL0 1709 aa9.6□□□□□ -0.87
KCNIP4-201ENST00000359001 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
KCNIP4-201ENST00000359001 RNF123Q5XPI4 1314 aa9.6□□□□□ -0.87
KCNIP4-201ENST00000359001 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
KCNIP4-201ENST00000359001 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
KCNIP4-201ENST00000359001 AFAP1Q8N556 730 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 ADGRL1O94910 1474 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 SCAPERQ9BY12 1400 aa9.58□□□□□ -0.88
KCNIP4-201ENST00000359001 MYT1Q01538 1121 aa9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 ASXL2Q76L83 1435 aa9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 EFCAB6Q5THR3 1501 aa9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 TMC1Q8TDI8 760 aa9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 RBM19Q9Y4C8 960 aaKnown RBP9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
KCNIP4-201ENST00000359001 MYOM1P52179 1685 aa9.56□□□□□ -0.88
KCNIP4-201ENST00000359001 INSRP06213 1382 aa9.56□□□□□ -0.88
KCNIP4-201ENST00000359001 SYNMO15061 1565 aa9.56□□□□□ -0.88
KCNIP4-201ENST00000359001 LMTK2Q8IWU2 1503 aa9.56□□□□□ -0.88
KCNIP4-201ENST00000359001 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 MYOM2P54296 1465 aa9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 MAP3K4Q9Y6R4 1608 aa9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 SCAF11Q99590 1463 aaKnown RBP9.55□□□□□ -0.88
KCNIP4-201ENST00000359001 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
KCNIP4-201ENST00000359001 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms