RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 PLEKHG5O94827 1062 aa25.31■■□□□ 1.64
EDC4-201ENST00000358933 NOL8Q76FK4 1167 aaKnown RBP25.3■■□□□ 1.64
EDC4-201ENST00000358933 TRIM6-TRIM34B2RNG4 842 aa25.28■■□□□ 1.64
EDC4-201ENST00000358933 TPM2P07951 284 aa25.28■■□□□ 1.64
EDC4-201ENST00000358933 GNL2Q13823 731 aaKnown RBP25.27■■□□□ 1.64
EDC4-201ENST00000358933 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
EDC4-201ENST00000358933 KANK1Q14678 1352 aa25.26■■□□□ 1.63
EDC4-201ENST00000358933 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
EDC4-201ENST00000358933 RTF1Q92541 710 aaKnown RBP25.26■■□□□ 1.63
EDC4-201ENST00000358933 KIF16BQ96L93 1317 aa25.25■■□□□ 1.63
EDC4-201ENST00000358933 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
EDC4-201ENST00000358933 ZKSCAN2Q63HK3 967 aa25.25■■□□□ 1.63
EDC4-201ENST00000358933 PANK3Q9H999 370 aa25.25■■□□□ 1.63
EDC4-201ENST00000358933 ATP6V1DQ9Y5K8 247 aa25.24■■□□□ 1.63
EDC4-201ENST00000358933 BCL2L13Q9BXK5 485 aa25.22■■□□□ 1.63
EDC4-201ENST00000358933 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
EDC4-201ENST00000358933 USP47Q96K76 1375 aa25.22■■□□□ 1.63
EDC4-201ENST00000358933 ANKRD45Q5TZF3 282 aa25.21■■□□□ 1.63
EDC4-201ENST00000358933 HDGFL2Q7Z4V5 671 aaPredicted RBP25.21■■□□□ 1.63
EDC4-201ENST00000358933 R3HCC1Q9Y3T6 440 aaKnown RBP25.21■■□□□ 1.63
EDC4-201ENST00000358933 CCDC7Q96M83 1385 aa25.2■■□□□ 1.63
EDC4-201ENST00000358933 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.62
EDC4-201ENST00000358933 CNTLNQ9NXG0 1405 aa25.19■■□□□ 1.62
EDC4-201ENST00000358933 TRAK2O60296 914 aa25.18■■□□□ 1.62
EDC4-201ENST00000358933 NASPP49321 788 aaPredicted RBP25.18■■□□□ 1.62
EDC4-201ENST00000358933 NGEFQ8N5V2 710 aa25.18■■□□□ 1.62
EDC4-201ENST00000358933 MSH5O43196 834 aa25.18■■□□□ 1.62
EDC4-201ENST00000358933 C22orf23Q9BZE7 217 aa25.17■■□□□ 1.62
EDC4-201ENST00000358933 A0A0G2JS52 829 aa25.17■■□□□ 1.62
EDC4-201ENST00000358933 NUCB2P80303 420 aa25.17■■□□□ 1.62
EDC4-201ENST00000358933 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
EDC4-201ENST00000358933 RRP7AQ9Y3A4 280 aaKnown RBP25.17■■□□□ 1.62
EDC4-201ENST00000358933 BACH2Q9BYV9 841 aa25.16■■□□□ 1.62
EDC4-201ENST00000358933 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
EDC4-201ENST00000358933 GOLGA6L19H0YKK7 550 aa25.15■■□□□ 1.62
EDC4-201ENST00000358933 APAF1O14727 1248 aa25.15■■□□□ 1.62
EDC4-201ENST00000358933 STK31Q9BXU1 1019 aa25.14■■□□□ 1.62
EDC4-201ENST00000358933 FOXD4L6Q3SYB3 417 aaPredicted RBP25.14■■□□□ 1.61
EDC4-201ENST00000358933 FOXD4L3Q6VB84 417 aaPredicted RBP25.14■■□□□ 1.61
EDC4-201ENST00000358933 KIF7Q2M1P5 1343 aa25.13■■□□□ 1.61
EDC4-201ENST00000358933 CCDC34Q96HJ3 373 aa25.13■■□□□ 1.61
EDC4-201ENST00000358933 DDX19BQ9UMR2 479 aa25.12■■□□□ 1.61
EDC4-201ENST00000358933 TULP1O00294 542 aaPredicted RBP25.12■■□□□ 1.61
EDC4-201ENST00000358933 BECN2A8MW95 431 aa25.11■■□□□ 1.61
EDC4-201ENST00000358933 ZNF592Q92610 1267 aa25.11■■□□□ 1.61
EDC4-201ENST00000358933 RRP9O43818 475 aaKnown RBP25.11■■□□□ 1.61
EDC4-201ENST00000358933 GPS2Q13227 327 aa25.11■■□□□ 1.61
EDC4-201ENST00000358933 GPATCH3Q96I76 525 aa25.11■■□□□ 1.61
EDC4-201ENST00000358933 REC8O95072 547 aa25.11■■□□□ 1.61
EDC4-201ENST00000358933 AAMPQ13685 434 aa25.1■■□□□ 1.61
EDC4-201ENST00000358933 HSP90B1P14625 803 aaKnown RBP25.1■■□□□ 1.61
EDC4-201ENST00000358933 CCDC39Q9UFE4 941 aa25.09■■□□□ 1.61
EDC4-201ENST00000358933 TEX35Q5T0J7 233 aa25.09■■□□□ 1.61
EDC4-201ENST00000358933 DIAPH3Q9NSV4 1193 aa25.09■■□□□ 1.61
EDC4-201ENST00000358933 KIF3AQ9Y496 699 aa25.09■■□□□ 1.61
EDC4-201ENST00000358933 A0A0U1RQG5 324 aaPredicted RBP25.09■■□□□ 1.61
EDC4-201ENST00000358933 WASHC2AQ641Q2 1341 aa25.09■■□□□ 1.61
EDC4-201ENST00000358933 NOC3LQ8WTT2 800 aaKnown RBP25.09■■□□□ 1.61
EDC4-201ENST00000358933 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
EDC4-201ENST00000358933 SOX12O15370 315 aa25.08■■□□□ 1.6
EDC4-201ENST00000358933 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.6
EDC4-201ENST00000358933 ISY1Q9ULR0 285 aaKnown RBP25.07■■□□□ 1.6
EDC4-201ENST00000358933 LMOD3Q0VAK6 560 aa25.07■■□□□ 1.6
EDC4-201ENST00000358933 MCTP1Q6DN14 999 aa25.07■■□□□ 1.6
EDC4-201ENST00000358933 SLC4A10Q6U841 1118 aa25.07■■□□□ 1.6
EDC4-201ENST00000358933 SETQ01105 290 aaPredicted RBP25.07■■□□□ 1.6
EDC4-201ENST00000358933 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
EDC4-201ENST00000358933 CHMP4AQ9BY43 222 aa25.06■■□□□ 1.6
EDC4-201ENST00000358933 TPM3P06753 285 aa25.06■■□□□ 1.6
EDC4-201ENST00000358933 HDAC5Q9UQL6 1122 aa25.05■■□□□ 1.6
EDC4-201ENST00000358933 CCDC173Q0VFZ6 552 aa25.04■■□□□ 1.6
EDC4-201ENST00000358933 SF3A1Q15459 793 aaKnown RBP25.04■■□□□ 1.6
EDC4-201ENST00000358933 STK26Q9P289 416 aa25.04■■□□□ 1.6
EDC4-201ENST00000358933 SPAG9O60271 1321 aaKnown RBP25.03■■□□□ 1.6
EDC4-201ENST00000358933 CCAR2Q8N163 923 aaKnown RBP25.02■■□□□ 1.6
EDC4-201ENST00000358933 RILPL2Q969X0 211 aa25.01■■□□□ 1.59
EDC4-201ENST00000358933 TERF2IPQ9NYB0 399 aa25.01■■□□□ 1.59
EDC4-201ENST00000358933 BRD4O60885 1362 aaPredicted RBP25.01■■□□□ 1.59
EDC4-201ENST00000358933 HMGN5P82970 282 aaKnown RBP25■■□□□ 1.59
EDC4-201ENST00000358933 RBM10P98175 930 aaKnown RBP24.99■■□□□ 1.59
EDC4-201ENST00000358933 AKNAQ7Z591 1439 aa24.98■■□□□ 1.59
EDC4-201ENST00000358933 H3BQV1 296 aa24.97■■□□□ 1.59
EDC4-201ENST00000358933 IFFO2Q5TF58 517 aa24.97■■□□□ 1.59
EDC4-201ENST00000358933 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
EDC4-201ENST00000358933 ESPNB1AK53 854 aa24.97■■□□□ 1.59
EDC4-201ENST00000358933 LMOD2Q6P5Q4 547 aa24.96■■□□□ 1.59
EDC4-201ENST00000358933 IFT57Q9NWB7 429 aa24.96■■□□□ 1.59
EDC4-201ENST00000358933 UACAQ9BZF9 1416 aa24.95■■□□□ 1.59
EDC4-201ENST00000358933 PODXL2Q9NZ53 605 aa24.95■■□□□ 1.59
EDC4-201ENST00000358933 CCDC66A2RUB6 948 aa24.95■■□□□ 1.58
EDC4-201ENST00000358933 GRPEL1Q9HAV7 217 aa24.95■■□□□ 1.58
EDC4-201ENST00000358933 RNF214Q8ND24 703 aa24.94■■□□□ 1.58
EDC4-201ENST00000358933 LNPKQ9C0E8 428 aa24.94■■□□□ 1.58
EDC4-201ENST00000358933 CDCA7LQ96GN5 454 aa24.94■■□□□ 1.58
EDC4-201ENST00000358933 CCDC144AA2RUR9 1427 aa24.94■■□□□ 1.58
EDC4-201ENST00000358933 ELL2O00472 640 aaPredicted RBP24.94■■□□□ 1.58
EDC4-201ENST00000358933 PANK1Q8TE04 598 aa24.94■■□□□ 1.58
EDC4-201ENST00000358933 CAVIN1Q6NZI2 390 aaKnown RBP24.93■■□□□ 1.58
EDC4-201ENST00000358933 ARGLU1Q9NWB6 273 aaPredicted RBP24.93■■□□□ 1.58
EDC4-201ENST00000358933 INTS3Q68E01 1043 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms