RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 SAMD9Q5K651 1589 aa18.77■□□□□ 0.6
SIRPA-202ENST00000358771 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.59
SIRPA-202ENST00000358771 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.59
SIRPA-202ENST00000358771 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
SIRPA-202ENST00000358771 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
SIRPA-202ENST00000358771 ATP10BO94823 1461 aa18.76■□□□□ 0.59
SIRPA-202ENST00000358771 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
SIRPA-202ENST00000358771 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
SIRPA-202ENST00000358771 RAPGEF6Q8TEU7 1601 aa18.75■□□□□ 0.59
SIRPA-202ENST00000358771 KIAA0556O60303 1618 aa18.74■□□□□ 0.59
SIRPA-202ENST00000358771 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
SIRPA-202ENST00000358771 POGKQ9P215 609 aa18.74■□□□□ 0.59
SIRPA-202ENST00000358771 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
SIRPA-202ENST00000358771 PLIN1O60240 522 aa18.73■□□□□ 0.59
SIRPA-202ENST00000358771 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
SIRPA-202ENST00000358771 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
SIRPA-202ENST00000358771 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
SIRPA-202ENST00000358771 SRPK2P78362 688 aaKnown RBP18.71■□□□□ 0.59
SIRPA-202ENST00000358771 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
SIRPA-202ENST00000358771 MORC1Q86VD1 984 aa18.71■□□□□ 0.59
SIRPA-202ENST00000358771 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
SIRPA-202ENST00000358771 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
SIRPA-202ENST00000358771 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
SIRPA-202ENST00000358771 CFAP70Q5T0N1 1121 aa18.69■□□□□ 0.58
SIRPA-202ENST00000358771 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SIRPA-202ENST00000358771 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
SIRPA-202ENST00000358771 RGS3P49796 1198 aa18.67■□□□□ 0.58
SIRPA-202ENST00000358771 PNISRQ8TF01 805 aaKnown RBP18.66■□□□□ 0.58
SIRPA-202ENST00000358771 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
SIRPA-202ENST00000358771 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
SIRPA-202ENST00000358771 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
SIRPA-202ENST00000358771 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
SIRPA-202ENST00000358771 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
SIRPA-202ENST00000358771 KIF14Q15058 1648 aa18.65■□□□□ 0.58
SIRPA-202ENST00000358771 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
SIRPA-202ENST00000358771 PLEKHG5O94827 1062 aa18.63■□□□□ 0.57
SIRPA-202ENST00000358771 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
SIRPA-202ENST00000358771 KDM6BO15054 1643 aa18.62■□□□□ 0.57
SIRPA-202ENST00000358771 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
SIRPA-202ENST00000358771 RAPGEF3O95398 923 aa18.59■□□□□ 0.57
SIRPA-202ENST00000358771 ADAMTS8Q9UP79 889 aa18.59■□□□□ 0.57
SIRPA-202ENST00000358771 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
SIRPA-202ENST00000358771 LAS1LQ9Y4W2 734 aaKnown RBP18.58■□□□□ 0.57
SIRPA-202ENST00000358771 APAF1O14727 1248 aa18.58■□□□□ 0.56
SIRPA-202ENST00000358771 U2AF1L5P0DN76 240 aaPredicted RBP18.58■□□□□ 0.56
SIRPA-202ENST00000358771 U2AF1Q01081 240 aaKnown RBP eCLIP18.58■□□□□ 0.56
SIRPA-202ENST00000358771 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
SIRPA-202ENST00000358771 NUP160Q12769 1436 aa18.57■□□□□ 0.56
SIRPA-202ENST00000358771 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
SIRPA-202ENST00000358771 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
SIRPA-202ENST00000358771 PZPP20742 1482 aa18.56■□□□□ 0.56
SIRPA-202ENST00000358771 SOX12O15370 315 aa18.55■□□□□ 0.56
SIRPA-202ENST00000358771 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
SIRPA-202ENST00000358771 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
SIRPA-202ENST00000358771 MAPK8IP3Q9UPT6 1336 aa18.53■□□□□ 0.56
SIRPA-202ENST00000358771 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
SIRPA-202ENST00000358771 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
SIRPA-202ENST00000358771 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
SIRPA-202ENST00000358771 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
SIRPA-202ENST00000358771 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
SIRPA-202ENST00000358771 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
SIRPA-202ENST00000358771 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
SIRPA-202ENST00000358771 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
SIRPA-202ENST00000358771 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
SIRPA-202ENST00000358771 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
SIRPA-202ENST00000358771 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
SIRPA-202ENST00000358771 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
SIRPA-202ENST00000358771 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
SIRPA-202ENST00000358771 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
SIRPA-202ENST00000358771 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
SIRPA-202ENST00000358771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
SIRPA-202ENST00000358771 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
SIRPA-202ENST00000358771 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
SIRPA-202ENST00000358771 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
SIRPA-202ENST00000358771 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
SIRPA-202ENST00000358771 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
SIRPA-202ENST00000358771 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
SIRPA-202ENST00000358771 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
SIRPA-202ENST00000358771 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
SIRPA-202ENST00000358771 UPF2Q9HAU5 1272 aaKnown RBP18.43■□□□□ 0.54
SIRPA-202ENST00000358771 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
SIRPA-202ENST00000358771 FAM135AQ9P2D6 1515 aa18.4■□□□□ 0.54
SIRPA-202ENST00000358771 GGNBP2Q9H3C7 697 aa18.39■□□□□ 0.53
SIRPA-202ENST00000358771 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
SIRPA-202ENST00000358771 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
SIRPA-202ENST00000358771 PLCH2O75038 1416 aa18.38■□□□□ 0.53
SIRPA-202ENST00000358771 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
SIRPA-202ENST00000358771 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
SIRPA-202ENST00000358771 ADGRL1O94910 1474 aa18.38■□□□□ 0.53
SIRPA-202ENST00000358771 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
SIRPA-202ENST00000358771 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
SIRPA-202ENST00000358771 MTHFSP49914 203 aa18.37■□□□□ 0.53
SIRPA-202ENST00000358771 LRRIQ1Q96JM4 1722 aa18.37■□□□□ 0.53
SIRPA-202ENST00000358771 SMG6Q86US8 1419 aaKnown RBP18.37■□□□□ 0.53
SIRPA-202ENST00000358771 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
SIRPA-202ENST00000358771 TESK2Q96S53 571 aa18.36■□□□□ 0.53
SIRPA-202ENST00000358771 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
SIRPA-202ENST00000358771 FANCAO15360 1455 aa18.36■□□□□ 0.53
SIRPA-202ENST00000358771 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
SIRPA-202ENST00000358771 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms