RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DAPK1P53355 1430 aa20.49■□□□□ 0.87
NIPAL3-203ENST00000358028 SHANK2Q9UPX8 1470 aa20.48■□□□□ 0.87
NIPAL3-203ENST00000358028 RIMS1Q86UR5 1692 aaKnown RBP20.48■□□□□ 0.87
NIPAL3-203ENST00000358028 FER1L4A9Z1Z3 1794 aa20.47■□□□□ 0.87
NIPAL3-203ENST00000358028 A2MP01023 1474 aa20.47■□□□□ 0.87
NIPAL3-203ENST00000358028 AGLP35573 1532 aa20.47■□□□□ 0.87
NIPAL3-203ENST00000358028 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
NIPAL3-203ENST00000358028 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
NIPAL3-203ENST00000358028 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
NIPAL3-203ENST00000358028 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
NIPAL3-203ENST00000358028 CHIC2Q9UKJ5 165 aa20.44■□□□□ 0.86
NIPAL3-203ENST00000358028 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
NIPAL3-203ENST00000358028 MLECQ14165 292 aa20.42■□□□□ 0.86
NIPAL3-203ENST00000358028 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
NIPAL3-203ENST00000358028 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
NIPAL3-203ENST00000358028 DHX29Q7Z478 1369 aaKnown RBP20.38■□□□□ 0.85
NIPAL3-203ENST00000358028 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
NIPAL3-203ENST00000358028 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
NIPAL3-203ENST00000358028 LMTK3Q96Q04 1460 aa20.35■□□□□ 0.85
NIPAL3-203ENST00000358028 DUOX2Q9NRD8 1548 aa20.35■□□□□ 0.85
NIPAL3-203ENST00000358028 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
NIPAL3-203ENST00000358028 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
NIPAL3-203ENST00000358028 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
NIPAL3-203ENST00000358028 NCOA1Q15788 1441 aa20.32■□□□□ 0.84
NIPAL3-203ENST00000358028 TRIM52Q96A61 297 aa20.32■□□□□ 0.84
NIPAL3-203ENST00000358028 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
NIPAL3-203ENST00000358028 C3P01024 1663 aa20.3■□□□□ 0.84
NIPAL3-203ENST00000358028 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
NIPAL3-203ENST00000358028 MROH1Q8NDA8 1641 aa20.29■□□□□ 0.84
NIPAL3-203ENST00000358028 KIF3BO15066 747 aa20.29■□□□□ 0.84
NIPAL3-203ENST00000358028 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
NIPAL3-203ENST00000358028 GGT6Q6P531 493 aa20.28■□□□□ 0.84
NIPAL3-203ENST00000358028 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
NIPAL3-203ENST00000358028 DEPDC5O75140 1603 aa20.26■□□□□ 0.83
NIPAL3-203ENST00000358028 CEP152O94986 1710 aa20.24■□□□□ 0.83
NIPAL3-203ENST00000358028 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
NIPAL3-203ENST00000358028 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
NIPAL3-203ENST00000358028 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
NIPAL3-203ENST00000358028 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
NIPAL3-203ENST00000358028 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
NIPAL3-203ENST00000358028 PREX1Q8TCU6 1659 aa20.21■□□□□ 0.83
NIPAL3-203ENST00000358028 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
NIPAL3-203ENST00000358028 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
NIPAL3-203ENST00000358028 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
NIPAL3-203ENST00000358028 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
NIPAL3-203ENST00000358028 CEBPAP49715 358 aaPredicted RBP20.19■□□□□ 0.82
NIPAL3-203ENST00000358028 ABCC3O15438 1527 aa20.18■□□□□ 0.82
NIPAL3-203ENST00000358028 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
NIPAL3-203ENST00000358028 CAMSAP1Q5T5Y3 1602 aa20.17■□□□□ 0.82
NIPAL3-203ENST00000358028 HSPA2P54652 639 aa20.17■□□□□ 0.82
NIPAL3-203ENST00000358028 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
NIPAL3-203ENST00000358028 UNC13BO14795 1591 aa20.16■□□□□ 0.82
NIPAL3-203ENST00000358028 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
NIPAL3-203ENST00000358028 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
NIPAL3-203ENST00000358028 ANKRD30BQ9BXX2 1392 aa20.16■□□□□ 0.82
NIPAL3-203ENST00000358028 VWDEQ8N2E2 1590 aa20.14■□□□□ 0.82
NIPAL3-203ENST00000358028 PZPP20742 1482 aa20.14■□□□□ 0.82
NIPAL3-203ENST00000358028 RPRD2Q5VT52 1461 aaKnown RBP20.14■□□□□ 0.82
NIPAL3-203ENST00000358028 WASHC2CQ9Y4E1 1318 aa20.13■□□□□ 0.81
NIPAL3-203ENST00000358028 CFAP65Q6ZU64 1925 aaKnown RBP20.13■□□□□ 0.81
NIPAL3-203ENST00000358028 FOXD1Q16676 465 aa20.13■□□□□ 0.81
NIPAL3-203ENST00000358028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
NIPAL3-203ENST00000358028 ILDR1Q86SU0 546 aaPredicted RBP20.11■□□□□ 0.81
NIPAL3-203ENST00000358028 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
NIPAL3-203ENST00000358028 UHRF1BP1Q6BDS2 1440 aa20.1■□□□□ 0.81
NIPAL3-203ENST00000358028 MYO3AQ8NEV4 1616 aa20.08■□□□□ 0.81
NIPAL3-203ENST00000358028 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.8
NIPAL3-203ENST00000358028 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.8
NIPAL3-203ENST00000358028 IQGAP3Q86VI3 1631 aa20.08■□□□□ 0.8
NIPAL3-203ENST00000358028 NPATQ14207 1427 aa20.07■□□□□ 0.8
NIPAL3-203ENST00000358028 KANK1Q14678 1352 aa20.07■□□□□ 0.8
NIPAL3-203ENST00000358028 STRCQ7RTU9 1775 aa20.06■□□□□ 0.8
NIPAL3-203ENST00000358028 TET3O43151 1660 aa20.06■□□□□ 0.8
NIPAL3-203ENST00000358028 EFCAB6Q5THR3 1501 aa20.05■□□□□ 0.8
NIPAL3-203ENST00000358028 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
NIPAL3-203ENST00000358028 CCER2I3L3R5 266 aa20.03■□□□□ 0.8
NIPAL3-203ENST00000358028 HSPA5P11021 654 aaKnown RBP20.03■□□□□ 0.8
NIPAL3-203ENST00000358028 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
NIPAL3-203ENST00000358028 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
NIPAL3-203ENST00000358028 ANP32CO43423 234 aa20.01■□□□□ 0.79
NIPAL3-203ENST00000358028 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
NIPAL3-203ENST00000358028 E9PCH4 1651 aa20.01■□□□□ 0.79
NIPAL3-203ENST00000358028 ARHGAP31Q2M1Z3 1444 aa20.01■□□□□ 0.79
NIPAL3-203ENST00000358028 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.79
NIPAL3-203ENST00000358028 CEP170BQ9Y4F5 1589 aaPredicted RBP19.99■□□□□ 0.79
NIPAL3-203ENST00000358028 NUP155O75694 1391 aa19.98■□□□□ 0.79
NIPAL3-203ENST00000358028 TNRQ92752 1358 aa19.98■□□□□ 0.79
NIPAL3-203ENST00000358028 PKD2Q13563 968 aa19.95■□□□□ 0.78
NIPAL3-203ENST00000358028 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
NIPAL3-203ENST00000358028 SYNMO15061 1565 aa19.95■□□□□ 0.78
NIPAL3-203ENST00000358028 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
NIPAL3-203ENST00000358028 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
NIPAL3-203ENST00000358028 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
NIPAL3-203ENST00000358028 SUPT16HQ9Y5B9 1047 aaKnown RBP19.92■□□□□ 0.78
NIPAL3-203ENST00000358028 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
NIPAL3-203ENST00000358028 PTPRTO14522 1441 aa19.91■□□□□ 0.78
NIPAL3-203ENST00000358028 POLR1AO95602 1720 aaPredicted RBP19.91■□□□□ 0.78
NIPAL3-203ENST00000358028 NLRP1Q9C000 1473 aa19.91■□□□□ 0.78
NIPAL3-203ENST00000358028 NOS1P29475 1434 aa19.9■□□□□ 0.78
NIPAL3-203ENST00000358028 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms