RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TSR1Q2NL82 804 aaKnown RBP7.24□□□□□ -1.25
BRCA1-203ENST00000357654 GZF1Q9H116 711 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-203ENST00000357654 CHMP4BQ9H444 224 aaKnown RBP7.24□□□□□ -1.25
BRCA1-203ENST00000357654 APPP05067 770 aa7.24□□□□□ -1.25
BRCA1-203ENST00000357654 NUTM2BA6NNL0 878 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 NUTM2EB1AL46 878 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 MAP3K9P80192 1104 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 NUTM2AQ8IVF1 878 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 AMPHP49418 695 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 NAP1L1P55209 391 aaKnown RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 HSP90AB2PQ58FF8 381 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 RSPH4AQ5TD94 716 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 HDGFL2Q7Z4V5 671 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 ERCC6Q03468 1493 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 HTATSF1O43719 755 aaKnown RBP7.23□□□□□ -1.25
BRCA1-203ENST00000357654 PIP4K2BP78356 416 aa7.23□□□□□ -1.25
BRCA1-203ENST00000357654 FOSBP53539 338 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 ITPRIPQ8IWB1 547 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 FOXD4L6Q3SYB3 417 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-203ENST00000357654 FOXD4L3Q6VB84 417 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-203ENST00000357654 SETQ01105 290 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-203ENST00000357654 CCDC27Q2M243 656 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 EID1Q9Y6B2 187 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 CSRNP3Q8WYN3 585 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
BRCA1-203ENST00000357654 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.25
BRCA1-203ENST00000357654 SPAG9O60271 1321 aaKnown RBP7.21□□□□□ -1.26
BRCA1-203ENST00000357654 H3BQV1 296 aa7.21□□□□□ -1.26
BRCA1-203ENST00000357654 IFFO2Q5TF58 517 aa7.21□□□□□ -1.26
BRCA1-203ENST00000357654 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-203ENST00000357654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCA1-203ENST00000357654 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 SYNE3Q6ZMZ3 975 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 DHX37Q8IY37 1157 aaKnown RBP7.2□□□□□ -1.26
BRCA1-203ENST00000357654 CFDP1Q9UEE9 299 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-203ENST00000357654 USP35Q9P2H5 1018 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 WDR78Q5VTH9 848 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 HOMER1Q86YM7 354 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
BRCA1-203ENST00000357654 PLIN1O60240 522 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 PSMD1Q99460 953 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 PTMSP20962 102 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 NECTIN2Q92692 538 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 CBX1P83916 185 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 UNC13AQ9UPW8 1703 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 TCERG1O14776 1098 aaKnown RBP7.19□□□□□ -1.26
BRCA1-203ENST00000357654 C1orf141Q5JVX7 400 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 ANKRD62A6NC57 917 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 NEBLO76041 1014 aa7.19□□□□□ -1.26
BRCA1-203ENST00000357654 RBM5P52756 815 aaKnown RBP eCLIP7.19□□□□□ -1.26
BRCA1-203ENST00000357654 MS4A1P11836 297 aa7.18□□□□□ -1.26
BRCA1-203ENST00000357654 KANK1Q14678 1352 aa7.18□□□□□ -1.26
BRCA1-203ENST00000357654 ECM2O94769 699 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-203ENST00000357654 NFXL1Q6ZNB6 911 aa7.18□□□□□ -1.26
BRCA1-203ENST00000357654 BICRAQ9NZM4 1560 aa7.18□□□□□ -1.26
BRCA1-203ENST00000357654 EPS15P42566 896 aa7.18□□□□□ -1.26
BRCA1-203ENST00000357654 MPHOSPH10O00566 681 aaKnown RBP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 TTC5Q8N0Z6 440 aa7.17□□□□□ -1.26
BRCA1-203ENST00000357654 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
BRCA1-203ENST00000357654 EIF2S2P20042 333 aaKnown RBP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 MATR3P43243 847 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 U2AF1L5P0DN76 240 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 U2AF1Q01081 240 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-203ENST00000357654 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
BRCA1-203ENST00000357654 RILPL2Q969X0 211 aa7.16□□□□□ -1.26
BRCA1-203ENST00000357654 STK11IPQ8N1F8 1099 aa7.16□□□□□ -1.26
BRCA1-203ENST00000357654 TRIM29Q14134 588 aa7.15□□□□□ -1.26
BRCA1-203ENST00000357654 SLKQ9H2G2 1235 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-203ENST00000357654 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.26
BRCA1-203ENST00000357654 KIF16BQ96L93 1317 aa7.15□□□□□ -1.26
BRCA1-203ENST00000357654 TPM1P09493 284 aa7.15□□□□□ -1.26
BRCA1-203ENST00000357654 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
BRCA1-203ENST00000357654 CCDC70Q6NSX1 233 aa7.15□□□□□ -1.26
BRCA1-203ENST00000357654 DCAF11Q8TEB1 546 aa7.15□□□□□ -1.26
BRCA1-203ENST00000357654 CCDC47Q96A33 483 aaKnown RBP7.15□□□□□ -1.26
BRCA1-203ENST00000357654 ZNF592Q92610 1267 aa7.15□□□□□ -1.27
BRCA1-203ENST00000357654 CHMP4CQ96CF2 233 aa7.14□□□□□ -1.27
BRCA1-203ENST00000357654 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 ERICH2A1L162 156 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 NEFHP12036 1026 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 HMGN5P82970 282 aaKnown RBP7.13□□□□□ -1.27
BRCA1-203ENST00000357654 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-203ENST00000357654 TTLL5Q6EMB2 1281 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 TMF1P82094 1093 aa7.13□□□□□ -1.27
BRCA1-203ENST00000357654 SCLT1Q96NL6 688 aa7.12□□□□□ -1.27
BRCA1-203ENST00000357654 SYAP1Q96A49 352 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-203ENST00000357654 PEG3Q9GZU2 1588 aa7.11□□□□□ -1.27
BRCA1-203ENST00000357654 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
BRCA1-203ENST00000357654 RFX1P22670 979 aa7.11□□□□□ -1.27
BRCA1-203ENST00000357654 C16orf71Q8IYS4 520 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-203ENST00000357654 STRN4Q9NRL3 753 aa7.11□□□□□ -1.27
BRCA1-203ENST00000357654 ELL2O00472 640 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-203ENST00000357654 IPO7O95373 1038 aaKnown RBP7.11□□□□□ -1.27
BRCA1-203ENST00000357654 PSME1Q06323 249 aa7.11□□□□□ -1.27
BRCA1-203ENST00000357654 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
BRCA1-203ENST00000357654 PDCL3Q9H2J4 239 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms